RNA–Protein interactions for RNA: YDR429C

TIF35, Transcript of eIF3g subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene TIF35, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF35	YDR429C	GAS4	Q08271	471 aa		4.31	□□□□□ -1.72
TIF35	YDR429C	HAT1	Q12341	374 aa		4.31	□□□□□ -1.72
TIF35	YDR429C	SBP1	P10080	294 aa	Known RBP	4.3	□□□□□ -1.72
TIF35	YDR429C	RGP1	P16664	663 aa		4.3	□□□□□ -1.72
TIF35	YDR429C	BOL3	P39724	118 aa		4.3	□□□□□ -1.72
TIF35	YDR429C	YTA6	P40328	754 aa		4.3	□□□□□ -1.72
TIF35	YDR429C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.3	□□□□□ -1.72	not detected
TIF35	YDR429C	YDR215C	Q12240	137 aa		4.3	□□□□□ -1.72
TIF35	YDR429C	Q0182	Q9ZZW1	134 aa		4.3	□□□□□ -1.72
TIF35	YDR429C	CYT1	P07143	309 aa		4.29	□□□□□ -1.72
TIF35	YDR429C	MET1	P36150	593 aa		4.29	□□□□□ -1.72
TIF35	YDR429C	ERP5	P38819	212 aa		4.28	□□□□□ -1.72
TIF35	YDR429C	MCA1	Q08601	432 aa		4.28	□□□□□ -1.72
TIF35	YDR429C	VAN1	P23642	535 aa		4.27	□□□□□ -1.73
TIF35	YDR429C	UBP1	P25037	809 aa		4.27	□□□□□ -1.73
TIF35	YDR429C	BOI1	P38041	980 aa	Known RBP	4.27	□□□□□ -1.73
TIF35	YDR429C	ALD4	P46367	519 aa	Known RBP	4.27	□□□□□ -1.73
TIF35	YDR429C	SEN54	Q02825	467 aa	Predicted RBP	4.27	□□□□□ -1.73
TIF35	YDR429C	PUF6	Q04373	656 aa	Known RBP	4.27	□□□□□ -1.73
TIF35	YDR429C	PNP1	Q05788	311 aa		4.27	□□□□□ -1.73
TIF35	YDR429C	PUN1	Q06991	263 aa		4.27	□□□□□ -1.73
TIF35	YDR429C	YBL113C	Q7M4S9	792 aa		4.27	□□□□□ -1.73
TIF35	YDR429C	TRL1	P09880	827 aa	Known RBP	4.26	□□□□□ -1.73
TIF35	YDR429C	AMN1	P38285	549 aa	Predicted RBP	4.26	□□□□□ -1.73
TIF35	YDR429C	PRY1	P47032	299 aa		4.26	□□□□□ -1.73
TIF35	YDR429C	MTO1	P53070	669 aa		4.26	□□□□□ -1.73
TIF35	YDR429C	KAR5	Q04746	504 aa		4.26	□□□□□ -1.73
TIF35	YDR429C	SRS2	P12954	1174 aa		4.25	□□□□□ -1.73
TIF35	YDR429C	RPP1A	P05318	106 aa	Predicted RBP	4.24	□□□□□ -1.73
TIF35	YDR429C	NGR1	P32831	672 aa	Known RBP	4.24	□□□□□ -1.73
TIF35	YDR429C	TAT1	P38085	619 aa		4.24	□□□□□ -1.73
TIF35	YDR429C	MDJ2	P42834	146 aa		4.24	□□□□□ -1.73
TIF35	YDR429C	CAB1	Q04430	367 aa		4.24	□□□□□ -1.73
TIF35	YDR429C	TRS33	Q99394	268 aa		4.24	□□□□□ -1.73
TIF35	YDR429C	GRS1	P38088	690 aa	Known RBP	4.23	□□□□□ -1.73
TIF35	YDR429C	YBR197C	P38306	217 aa		4.23	□□□□□ -1.73
TIF35	YDR429C	LSB6	P42951	607 aa		4.23	□□□□□ -1.73
TIF35	YDR429C	ISC10	P32645	267 aa		4.22	□□□□□ -1.73
TIF35	YDR429C	KTR2	P33550	425 aa		4.22	□□□□□ -1.73
TIF35	YDR429C	PGM2	P37012	569 aa	Known RBP	4.22	□□□□□ -1.73
TIF35	YDR429C	HXT5	P38695	592 aa		4.22	□□□□□ -1.73
TIF35	YDR429C	IPL1	P38991	367 aa		4.22	□□□□□ -1.73
TIF35	YDR429C	PRK1	P40494	810 aa		4.22	□□□□□ -1.73
TIF35	YDR429C	FOX2	Q02207	900 aa	Known RBP	4.22	□□□□□ -1.73
TIF35	YDR429C	CUS1	Q02554	436 aa	Predicted RBP	4.22	□□□□□ -1.73
TIF35	YDR429C	RPB10	P22139	70 aa		4.21	□□□□□ -1.74
TIF35	YDR429C	ALG14	P38242	237 aa		4.21	□□□□□ -1.74
TIF35	YDR429C	SKP1	P52286	194 aa		4.21	□□□□□ -1.74
TIF35	YDR429C	ATG1	P53104	897 aa		4.21	□□□□□ -1.74
TIF35	YDR429C	HEH2	Q03281	663 aa		4.21	□□□□□ -1.74
TIF35	YDR429C	UTP4	Q06679	776 aa	Known RBP	4.21	□□□□□ -1.74
TIF35	YDR429C	LSO1	Q3E827	93 aa		4.21	□□□□□ -1.74
TIF35	YDR429C	NHA1	Q99271	985 aa		4.21	□□□□□ -1.74
TIF35	YDR429C	KAP122	P32767	1081 aa		4.2	□□□□□ -1.74
TIF35	YDR429C	SCD5	P34758	872 aa		4.2	□□□□□ -1.74
TIF35	YDR429C	NCL1	P38205	684 aa	Known RBP	4.2	□□□□□ -1.74
TIF35	YDR429C	GLO3	P38682	493 aa	Known RBP	4.2	□□□□□ -1.74
TIF35	YDR429C	QDR1	P40475	563 aa		4.2	□□□□□ -1.74
TIF35	YDR429C	YNR040W	P53736	256 aa		4.2	□□□□□ -1.74
TIF35	YDR429C	FRT1	Q99332	602 aa		4.2	□□□□□ -1.74
TIF35	YDR429C	FUR4	P05316	633 aa	Known RBP	4.19	□□□□□ -1.74
TIF35	YDR429C	NAR1	P23503	491 aa	Known RBP	4.19	□□□□□ -1.74
TIF35	YDR429C	YHL050C	P38721	697 aa		4.19	□□□□□ -1.74
TIF35	YDR429C	YHR219W	P38900	624 aa		4.19	□□□□□ -1.74
TIF35	YDR429C	YPL034W	Q03083	165 aa		4.19	□□□□□ -1.74
TIF35	YDR429C	NUT2	Q06213	157 aa		4.19	□□□□□ -1.74
TIF35	YDR429C	RPC31	P17890	251 aa		4.18	□□□□□ -1.74
TIF35	YDR429C	APM2	P38700	605 aa		4.18	□□□□□ -1.74
TIF35	YDR429C	CWH41	P53008	833 aa		4.18	□□□□□ -1.74
TIF35	YDR429C	BUD9	P53226	547 aa		4.18	□□□□□ -1.74
TIF35	YDR429C	APC11	Q12157	165 aa		4.18	□□□□□ -1.74
TIF35	YDR429C	WHI5	Q12416	295 aa		4.18	□□□□□ -1.74
TIF35	YDR429C	MRPL33	P20084	86 aa		4.17	□□□□□ -1.74
TIF35	YDR429C	SLD2	P34252	453 aa		4.17	□□□□□ -1.74
TIF35	YDR429C	STM1	P39015	273 aa	Known RBP	4.17	□□□□□ -1.74
TIF35	YDR429C	QDR2	P40474	542 aa		4.17	□□□□□ -1.74
TIF35	YDR429C	GIS4	Q04233	774 aa		4.17	□□□□□ -1.74
TIF35	YDR429C	MSC6	Q08818	692 aa	Known RBP	4.17	□□□□□ -1.74
TIF35	YDR429C	MRP10	O75012	95 aa		4.16	□□□□□ -1.74
TIF35	YDR429C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
TIF35	YDR429C	ACF4	P47129	309 aa		4.16	□□□□□ -1.74
TIF35	YDR429C	GPI13	Q07830	1017 aa		4.16	□□□□□ -1.74
TIF35	YDR429C	GAS5	Q08193	484 aa		4.16	□□□□□ -1.74
TIF35	YDR429C	VMA3	P25515	160 aa		4.15	□□□□□ -1.75
TIF35	YDR429C	RRN6	P32786	894 aa		4.15	□□□□□ -1.75
TIF35	YDR429C	SUT1	P53032	299 aa	Known RBP	4.15	□□□□□ -1.75
TIF35	YDR429C	ALO1	P54783	526 aa	Known RBP	4.15	□□□□□ -1.75
TIF35	YDR429C	RRP15	Q06511	250 aa	Predicted RBP	4.15	□□□□□ -1.75
TIF35	YDR429C	MNL2	Q12205	849 aa		4.15	□□□□□ -1.75
TIF35	YDR429C	IDI1	P15496	288 aa		4.14	□□□□□ -1.75
TIF35	YDR429C	ATE1	P16639	503 aa		4.14	□□□□□ -1.75
TIF35	YDR429C	MAC1	P35192	417 aa		4.14	□□□□□ -1.75
TIF35	YDR429C	PPX1	P38698	397 aa		4.14	□□□□□ -1.75
TIF35	YDR429C	RRM3	P38766	723 aa		4.14	□□□□□ -1.75
TIF35	YDR429C	ITC1	P53125	1264 aa		4.14	□□□□□ -1.75
TIF35	YDR429C	AI3	P03877	415 aa		4.13	□□□□□ -1.75
TIF35	YDR429C	HEM3	P28789	327 aa		4.13	□□□□□ -1.75
TIF35	YDR429C	MET4	P32389	672 aa		4.13	□□□□□ -1.75
TIF35	YDR429C	SEC20	P28791	383 aa		4.12	□□□□□ -1.75
TIF35	YDR429C	TRS120	Q04183	1289 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms