RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C YHL050CP38721 697 aa6.12□□□□□ -1.43
SHU2YDR078C YHR219WP38900 624 aa6.12□□□□□ -1.43
SHU2YDR078C UBP1P25037 809 aa6.11□□□□□ -1.43
SHU2YDR078C NTH2P35172 780 aa6.11□□□□□ -1.43
SHU2YDR078C PPX1P38698 397 aa6.11□□□□□ -1.43
SHU2YDR078C ALD4P46367 519 aaKnown RBP6.11□□□□□ -1.43
SHU2YDR078C YDR215CQ12240 137 aa6.11□□□□□ -1.43
SHU2YDR078C FUR4P05316 633 aaKnown RBP6.1□□□□□ -1.43
SHU2YDR078C PAM1P37304 830 aaKnown RBP6.1□□□□□ -1.43
SHU2YDR078C SLN1P39928 1220 aaPredicted RBP6.1□□□□□ -1.43
SHU2YDR078C BOI2P39969 1040 aa6.1□□□□□ -1.43
SHU2YDR078C FPS1P23900 669 aa6.09□□□□□ -1.43
SHU2YDR078C SUV3P32580 737 aa6.09□□□□□ -1.43
SHU2YDR078C AMN1P38285 549 aaPredicted RBP6.09□□□□□ -1.43
SHU2YDR078C CYT1P07143 309 aa6.08□□□□□ -1.44
SHU2YDR078C RPS6AP0CX37 236 aaKnown RBP6.08□□□□□ -1.44
SHU2YDR078C RPS6BP0CX38 236 aaPredicted RBP6.08□□□□□ -1.44
SHU2YDR078C SHM1P37292 490 aaPredicted RBP6.08□□□□□ -1.44
SHU2YDR078C GLO3P38682 493 aaKnown RBP6.08□□□□□ -1.44
SHU2YDR078C QDR1P40475 563 aa6.08□□□□□ -1.44
SHU2YDR078C SUM1P46676 1062 aa6.08□□□□□ -1.44
SHU2YDR078C JJJ2P46997 583 aa6.08□□□□□ -1.44
SHU2YDR078C ACF4P47129 309 aa6.08□□□□□ -1.44
SHU2YDR078C SWI5P08153 709 aa6.07□□□□□ -1.44
SHU2YDR078C IRE1P32361 1115 aa6.07□□□□□ -1.44
SHU2YDR078C TBS1P38114 1094 aa6.07□□□□□ -1.44
SHU2YDR078C ALA1P40825 983 aaKnown RBP6.07□□□□□ -1.44
SHU2YDR078C CWH41P53008 833 aa6.07□□□□□ -1.44
SHU2YDR078C RRP15Q06511 250 aaPredicted RBP6.07□□□□□ -1.44
SHU2YDR078C MCA1Q08601 432 aa6.07□□□□□ -1.44
SHU2YDR078C LSO1Q3E827 93 aa6.07□□□□□ -1.44
SHU2YDR078C NGR1P32831 672 aaKnown RBP6.06□□□□□ -1.44
SHU2YDR078C NUT2Q06213 157 aa6.06□□□□□ -1.44
SHU2YDR078C WHI5Q12416 295 aa6.06□□□□□ -1.44
SHU2YDR078C MRPL16P38064 232 aa6.05□□□□□ -1.44
SHU2YDR078C MET10P39692 1035 aa6.05□□□□□ -1.44
SHU2YDR078C POL32P47110 350 aa6.05□□□□□ -1.44
SHU2YDR078C ALD2P47771 506 aa6.05□□□□□ -1.44
SHU2YDR078C ORC1P54784 914 aaPredicted RBP6.05□□□□□ -1.44
SHU2YDR078C PSH1Q12161 406 aa6.04□□□□□ -1.44
SHU2YDR078C FRT1Q99332 602 aa6.04□□□□□ -1.44
SHU2YDR078C PDC5P16467 563 aaKnown RBP6.03□□□□□ -1.44
SHU2YDR078C ATE1P16639 503 aa6.03□□□□□ -1.44
SHU2YDR078C THI12P42883 340 aa6.03□□□□□ -1.44
SHU2YDR078C LSB6P42951 607 aa6.03□□□□□ -1.44
SHU2YDR078C THI5P43534 340 aa6.03□□□□□ -1.44
SHU2YDR078C THI11P47183 340 aa6.03□□□□□ -1.44
SHU2YDR078C THI13Q07748 340 aa6.03□□□□□ -1.44
SHU2YDR078C AIM44Q99299 758 aa6.03□□□□□ -1.44
SHU2YDR078C PDC6P26263 563 aaKnown RBP6.02□□□□□ -1.45
SHU2YDR078C KNS1P32350 737 aaPredicted RBP6.02□□□□□ -1.45
SHU2YDR078C BOI1P38041 980 aaKnown RBP6.02□□□□□ -1.45
SHU2YDR078C YBR197CP38306 217 aa6.02□□□□□ -1.45
SHU2YDR078C SPR3P41901 512 aa6.02□□□□□ -1.45
SHU2YDR078C STB3Q12427 513 aa6.02□□□□□ -1.45
SHU2YDR078C ISC10P32645 267 aa6.01□□□□□ -1.45
SHU2YDR078C MET1P36150 593 aa6.01□□□□□ -1.45
SHU2YDR078C CAB1Q04430 367 aa6.01□□□□□ -1.45
SHU2YDR078C FOX2Q02207 900 aaKnown RBP6□□□□□ -1.45
SHU2YDR078C TY1A-DR2Q03964 440 aaKnown RBP6□□□□□ -1.45
SHU2YDR078C RPS31P05759 152 aaKnown RBP5.99□□□□□ -1.45
SHU2YDR078C MCM1P11746 286 aa5.99□□□□□ -1.45
SHU2YDR078C MET4P32389 672 aa5.99□□□□□ -1.45
SHU2YDR078C TAT1P38085 619 aa5.99□□□□□ -1.45
SHU2YDR078C PRY1P47032 299 aa5.99□□□□□ -1.45
SHU2YDR078C TRS120Q04183 1289 aa5.99□□□□□ -1.45
SHU2YDR078C APC11Q12157 165 aa5.99□□□□□ -1.45
SHU2YDR078C YPQ2Q06328 317 aa5.98□□□□□ -1.45
SHU2YDR078C MGE1P38523 228 aa5.97□□□□□ -1.45
SHU2YDR078C HXT5P38695 592 aa5.97□□□□□ -1.45
SHU2YDR078C SVF1Q05515 481 aa5.97□□□□□ -1.45
SHU2YDR078C RPB10P22139 70 aa5.96□□□□□ -1.46
SHU2YDR078C SEC8P32855 1065 aa5.96□□□□□ -1.46
SHU2YDR078C YJR107WP47145 328 aa5.96□□□□□ -1.46
SHU2YDR078C UFD2P54860 961 aa5.96□□□□□ -1.46
SHU2YDR078C SCD5P34758 872 aa5.95□□□□□ -1.46
SHU2YDR078C OYE2Q03558 400 aaKnown RBP5.95□□□□□ -1.46
SHU2YDR078C GPI13Q07830 1017 aa5.95□□□□□ -1.46
SHU2YDR078C MRPL33P20084 86 aa5.94□□□□□ -1.46
SHU2YDR078C MSC7P38694 644 aa5.94□□□□□ -1.46
SHU2YDR078C YPL034WQ03083 165 aa5.94□□□□□ -1.46
SHU2YDR078C LEU1P07264 779 aaKnown RBP5.93□□□□□ -1.46
SHU2YDR078C KTR2P33550 425 aa5.93□□□□□ -1.46
SHU2YDR078C MAC1P35192 417 aa5.93□□□□□ -1.46
SHU2YDR078C MNL2Q12205 849 aa5.93□□□□□ -1.46
SHU2YDR078C PHO4P07270 312 aaKnown RBP5.92□□□□□ -1.46
SHU2YDR078C SUT1P53032 299 aaKnown RBP5.92□□□□□ -1.46
SHU2YDR078C ALO1P54783 526 aaKnown RBP5.91□□□□□ -1.46
SHU2YDR078C UTP4Q06679 776 aaKnown RBP5.91□□□□□ -1.46
SHU2YDR078C VMA3P25515 160 aa5.9□□□□□ -1.46
SHU2YDR078C YNL165WP53891 406 aa5.9□□□□□ -1.46
SHU2YDR078C GCD6P32501 712 aaKnown RBP5.89□□□□□ -1.47
SHU2YDR078C SMC1P32908 1225 aa5.89□□□□□ -1.47
SHU2YDR078C RPT1P33299 467 aaKnown RBP5.89□□□□□ -1.47
SHU2YDR078C FYV10P40492 516 aa5.89□□□□□ -1.47
SHU2YDR078C CDC55Q00362 526 aa5.89□□□□□ -1.47
SHU2YDR078C HXT8P40886 569 aa5.88□□□□□ -1.47
SHU2YDR078C DAK2P43550 591 aa5.88□□□□□ -1.47
SHU2YDR078C YNL011CP53980 444 aa5.88□□□□□ -1.47
SHU2YDR078C Q0182Q9ZZW1 134 aa5.88□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 26.8 ms