RNA–Protein interactions for RNA: YDL166C

FAP7, Transcript of Essential NTPase required for small ribosome subunit synthesis, yeast

Gene FAP7, Length 594 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FAP7	YDL166C	GIN4	Q12263	1142 aa		3.9	□□□□□ -1.79
FAP7	YDL166C	LYS2	P07702	1392 aa		3.89	□□□□□ -1.79
FAP7	YDL166C	SES1	P07284	462 aa	Known RBP	3.89	□□□□□ -1.79
FAP7	YDL166C	DIT2	P21595	489 aa		3.89	□□□□□ -1.79
FAP7	YDL166C	MRC1	P25588	1096 aa		3.89	□□□□□ -1.79
FAP7	YDL166C	UGA3	P26370	528 aa		3.89	□□□□□ -1.79
FAP7	YDL166C	HSP104	P31539	908 aa	Known RBP	3.89	□□□□□ -1.79
FAP7	YDL166C	ELM1	P32801	640 aa		3.89	□□□□□ -1.79
FAP7	YDL166C	PTC4	P38089	393 aa		3.89	□□□□□ -1.79
FAP7	YDL166C	IES2	P40154	320 aa		3.89	□□□□□ -1.79
FAP7	YDL166C	KRE33	P53914	1056 aa	Known RBP	3.89	□□□□□ -1.79
FAP7	YDL166C	CTF4	Q01454	927 aa		3.89	□□□□□ -1.79
FAP7	YDL166C	GCD7	P32502	381 aa	Predicted RBP	3.88	□□□□□ -1.79
FAP7	YDL166C	RTG1	P32607	177 aa		3.88	□□□□□ -1.79
FAP7	YDL166C	PRX1	P34227	261 aa	Known RBP	3.88	□□□□□ -1.79
FAP7	YDL166C	SLI15	P38283	698 aa		3.88	□□□□□ -1.79
FAP7	YDL166C	MID1	P41821	548 aa		3.88	□□□□□ -1.79
FAP7	YDL166C	PRP43	P53131	767 aa	Known RBP	3.88	□□□□□ -1.79
FAP7	YDL166C	HXT17	P53631	564 aa		3.88	□□□□□ -1.79
FAP7	YDL166C	ARP5	P53946	755 aa		3.88	□□□□□ -1.79
FAP7	YDL166C	YNL035C	P53962	389 aa	Known RBP	3.88	□□□□□ -1.79
FAP7	YDL166C	YDR344C	Q05510	147 aa		3.88	□□□□□ -1.79
FAP7	YDL166C	SGD1	Q06132	899 aa		3.88	□□□□□ -1.79
FAP7	YDL166C	BRE1	Q07457	700 aa	Known RBP	3.88	□□□□□ -1.79
FAP7	YDL166C	PSK2	Q08217	1101 aa		3.88	□□□□□ -1.79
FAP7	YDL166C	NOP14	Q99207	810 aa	Known RBP	3.88	□□□□□ -1.79
FAP7	YDL166C	COQ4	O13525	335 aa		3.87	□□□□□ -1.79
FAP7	YDL166C	TRL1	P09880	827 aa	Known RBP	3.87	□□□□□ -1.79
FAP7	YDL166C	MRP7	P12687	371 aa		3.87	□□□□□ -1.79
FAP7	YDL166C	KCC4	P25389	1037 aa		3.87	□□□□□ -1.79
FAP7	YDL166C	CLB5	P30283	435 aa		3.87	□□□□□ -1.79
FAP7	YDL166C	RAD54	P32863	898 aa		3.87	□□□□□ -1.79
FAP7	YDL166C	RRM3	P38766	723 aa		3.87	□□□□□ -1.79
FAP7	YDL166C	SPO22	P40511	975 aa		3.87	□□□□□ -1.79
FAP7	YDL166C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	3.87	□□□□□ -1.79	not detected
FAP7	YDL166C	JIP4	Q03361	876 aa		3.87	□□□□□ -1.79
FAP7	YDL166C	YOL057W	Q08225	711 aa		3.87	□□□□□ -1.79
FAP7	YDL166C	MAM3	Q12296	706 aa		3.87	□□□□□ -1.79
FAP7	YDL166C	PDR18	P53756	1333 aa		3.87	□□□□□ -1.79
FAP7	YDL166C	PET111	P08468	800 aa		3.86	□□□□□ -1.79
FAP7	YDL166C	RAD24	P32641	659 aa		3.86	□□□□□ -1.79
FAP7	YDL166C	NPR3	P38742	1146 aa		3.86	□□□□□ -1.79
FAP7	YDL166C	SSF1	P38789	453 aa	Predicted RBP	3.86	□□□□□ -1.79
FAP7	YDL166C	DSN1	P40568	576 aa		3.86	□□□□□ -1.79
FAP7	YDL166C	MLC1	P53141	149 aa		3.86	□□□□□ -1.79
FAP7	YDL166C	YNR029C	P53729	429 aa	Known RBP	3.86	□□□□□ -1.79
FAP7	YDL166C	ITT1	Q04638	464 aa		3.86	□□□□□ -1.79
FAP7	YDL166C	UTP13	Q05946	817 aa	Known RBP	3.86	□□□□□ -1.79
FAP7	YDL166C	SUP35	P05453	685 aa	Known RBP	3.85	□□□□□ -1.79
FAP7	YDL166C	RAD4	P14736	754 aa		3.85	□□□□□ -1.79
FAP7	YDL166C	ATE1	P16639	503 aa		3.85	□□□□□ -1.79
FAP7	YDL166C	MNR2	P35724	969 aa		3.85	□□□□□ -1.79
FAP7	YDL166C	ORC6	P38826	435 aa		3.85	□□□□□ -1.79
FAP7	YDL166C	STM1	P39015	273 aa	Known RBP	3.85	□□□□□ -1.79
FAP7	YDL166C	BOI2	P39969	1040 aa		3.85	□□□□□ -1.79
FAP7	YDL166C	DNM1	P54861	757 aa		3.85	□□□□□ -1.79
FAP7	YDL166C	RMD1	Q03441	430 aa		3.85	□□□□□ -1.79
FAP7	YDL166C	PML39	Q03760	334 aa		3.85	□□□□□ -1.79
FAP7	YDL166C	YCG1	Q06680	1035 aa		3.85	□□□□□ -1.79
FAP7	YDL166C	CDC73	Q06697	393 aa		3.85	□□□□□ -1.79
FAP7	YDL166C	RIM20	Q12033	661 aa		3.85	□□□□□ -1.79
FAP7	YDL166C	ELG1	Q12050	791 aa		3.85	□□□□□ -1.79
FAP7	YDL166C	AIR2	Q12476	344 aa	Known RBP	3.85	□□□□□ -1.79
FAP7	YDL166C	DDP1	Q99321	188 aa	Known RBP	3.85	□□□□□ -1.79
FAP7	YDL166C	TRS33	Q99394	268 aa		3.85	□□□□□ -1.79
FAP7	YDL166C	TY1B-NL2	Q99337	1749 aa	Known RBP	3.84	□□□□□ -1.79
FAP7	YDL166C	SEC61	P32915	480 aa		3.84	□□□□□ -1.79
FAP7	YDL166C	RRP1	P35178	278 aa	Predicted RBP	3.84	□□□□□ -1.79
FAP7	YDL166C	ECM21	P38167	1117 aa	Known RBP	3.84	□□□□□ -1.79
FAP7	YDL166C	YHL017W	P38745	532 aa		3.84	□□□□□ -1.79
FAP7	YDL166C	RTT107	P38850	1070 aa		3.84	□□□□□ -1.79
FAP7	YDL166C	CAJ1	P39101	391 aa		3.84	□□□□□ -1.79
FAP7	YDL166C	NOC2	P39744	710 aa	Known RBP	3.84	□□□□□ -1.79
FAP7	YDL166C	PRP31	P49704	494 aa	Predicted RBP	3.84	□□□□□ -1.79
FAP7	YDL166C	CTF18	P49956	741 aa		3.84	□□□□□ -1.79
FAP7	YDL166C	YKE2	P52553	114 aa		3.84	□□□□□ -1.79
FAP7	YDL166C	MRS2	Q01926	470 aa		3.84	□□□□□ -1.79
FAP7	YDL166C	DUR1,2	P32528	1835 aa	Known RBP	3.84	□□□□□ -1.8
FAP7	YDL166C	FRS2	P15625	503 aa	Known RBP	3.83	□□□□□ -1.8
FAP7	YDL166C	GAP1	P19145	602 aa	Predicted RBP	3.83	□□□□□ -1.8
FAP7	YDL166C	KTR1	P27810	393 aa	Known RBP	3.83	□□□□□ -1.8
FAP7	YDL166C	GLC3	P32775	704 aa		3.83	□□□□□ -1.8
FAP7	YDL166C	SLD2	P34252	453 aa		3.83	□□□□□ -1.8
FAP7	YDL166C	YKT6	P36015	200 aa	Known RBP	3.83	□□□□□ -1.8
FAP7	YDL166C	AAP1	P37898	856 aa	Known RBP	3.83	□□□□□ -1.8
FAP7	YDL166C	NUG1	P40010	520 aa	Known RBP	3.83	□□□□□ -1.8
FAP7	YDL166C	CST6	P40535	587 aa		3.83	□□□□□ -1.8
FAP7	YDL166C	BUD6	P41697	788 aa		3.83	□□□□□ -1.8
FAP7	YDL166C	RPS0B	P46654	252 aa	Known RBP	3.83	□□□□□ -1.8
FAP7	YDL166C	ENT3	P47160	408 aa		3.83	□□□□□ -1.8
FAP7	YDL166C	CTH1	P47976	325 aa		3.83	□□□□□ -1.8
FAP7	YDL166C	RBA50	Q04418	439 aa		3.83	□□□□□ -1.8
FAP7	YDL166C	COG4	Q06096	861 aa		3.83	□□□□□ -1.8
FAP7	YDL166C	NCR1	Q12200	1170 aa		3.83	□□□□□ -1.8
FAP7	YDL166C	SWI1	P09547	1314 aa		3.83	□□□□□ -1.8
FAP7	YDL166C	URB1	P34241	1764 aa	Known RBP	3.82	□□□□□ -1.8
FAP7	YDL166C	ADE6	P38972	1358 aa	Known RBP	3.82	□□□□□ -1.8
FAP7	YDL166C	CPA2	P03965	1118 aa	Known RBP	3.82	□□□□□ -1.8
FAP7	YDL166C	PET123	P17558	318 aa		3.82	□□□□□ -1.8
FAP7	YDL166C	SIS1	P25294	352 aa	Known RBP	3.82	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms