RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C UTP4Q06679 776 aaKnown RBP5.41□□□□□ -1.54
RRP42YDL111C SUB2Q07478 446 aaKnown RBP5.41□□□□□ -1.54
RRP42YDL111C GLT1Q12680 2145 aaKnown RBP5.41□□□□□ -1.54
RRP42YDL111C NGR1P32831 672 aaKnown RBP5.4□□□□□ -1.54
RRP42YDL111C ROM1P53046 1155 aa5.4□□□□□ -1.54
RRP42YDL111C SSA4P22202 642 aaKnown RBP5.39□□□□□ -1.55
RRP42YDL111C HXT5P38695 592 aa5.39□□□□□ -1.55
RRP42YDL111C SKP1P52286 194 aa5.39□□□□□ -1.55
RRP42YDL111C YPL034WQ03083 165 aa5.39□□□□□ -1.55
RRP42YDL111C SCD5P34758 872 aa5.38□□□□□ -1.55
RRP42YDL111C TPS3P38426 1054 aaKnown RBP5.38□□□□□ -1.55
RRP42YDL111C MTO1P53070 669 aa5.38□□□□□ -1.55
RRP42YDL111C NHA1Q99271 985 aa5.38□□□□□ -1.55
RRP42YDL111C KAP122P32767 1081 aa5.37□□□□□ -1.55
RRP42YDL111C TTI1P36097 1038 aa5.37□□□□□ -1.55
RRP42YDL111C OMA1P36163 345 aa5.37□□□□□ -1.55
RRP42YDL111C TGL4P36165 910 aa5.37□□□□□ -1.55
RRP42YDL111C PRK1P40494 810 aa5.37□□□□□ -1.55
RRP42YDL111C NCL1P38205 684 aaKnown RBP5.36□□□□□ -1.55
RRP42YDL111C ALG14P38242 237 aa5.36□□□□□ -1.55
RRP42YDL111C YML020WQ03722 664 aa5.36□□□□□ -1.55
RRP42YDL111C NOP8Q08287 484 aaPredicted RBP5.36□□□□□ -1.55
RRP42YDL111C VAN1P23642 535 aa5.35□□□□□ -1.55
RRP42YDL111C PGM2P37012 569 aaKnown RBP5.35□□□□□ -1.55
RRP42YDL111C BUD9P53226 547 aa5.34□□□□□ -1.55
RRP42YDL111C CUS1Q02554 436 aaPredicted RBP5.34□□□□□ -1.55
RRP42YDL111C RPC31P17890 251 aa5.33□□□□□ -1.56
RRP42YDL111C ECM23Q02710 187 aa5.33□□□□□ -1.56
RRP42YDL111C GIS4Q04233 774 aa5.33□□□□□ -1.56
RRP42YDL111C NAR1P23503 491 aaKnown RBP5.32□□□□□ -1.56
RRP42YDL111C SUV3P32580 737 aa5.32□□□□□ -1.56
RRP42YDL111C APM2P38700 605 aa5.32□□□□□ -1.56
RRP42YDL111C CWH41P53008 833 aa5.32□□□□□ -1.56
RRP42YDL111C YNR040WP53736 256 aa5.32□□□□□ -1.56
RRP42YDL111C IRC24P40580 263 aa5.31□□□□□ -1.56
RRP42YDL111C TRS33Q99394 268 aa5.31□□□□□ -1.56
RRP42YDL111C QDR2P40474 542 aa5.3□□□□□ -1.56
RRP42YDL111C CAB1Q04430 367 aa5.3□□□□□ -1.56
RRP42YDL111C AI3P03877 415 aa5.29□□□□□ -1.56
RRP42YDL111C PUP1P25043 261 aa5.28□□□□□ -1.56
RRP42YDL111C CPS1P27614 576 aa5.28□□□□□ -1.56
RRP42YDL111C UBX7P38349 436 aa5.28□□□□□ -1.56
RRP42YDL111C INP52P50942 1183 aa5.28□□□□□ -1.56
RRP42YDL111C MRPL33P20084 86 aa5.27□□□□□ -1.57
RRP42YDL111C VMA3P25515 160 aa5.27□□□□□ -1.57
RRP42YDL111C NAB2P32505 525 aaKnown RBP RIP-Chip data5.27□□□□□ -1.57not detected
RRP42YDL111C YBR197CP38306 217 aa5.27□□□□□ -1.57
RRP42YDL111C ITC1P53125 1264 aa5.27□□□□□ -1.57
RRP42YDL111C RPL34AP87262 121 aaPredicted RBP5.27□□□□□ -1.57
RRP42YDL111C GAS5Q08193 484 aa5.27□□□□□ -1.57
RRP42YDL111C SAC7P17121 654 aa5.26□□□□□ -1.57
RRP42YDL111C PGM1P33401 570 aaKnown RBP5.26□□□□□ -1.57
RRP42YDL111C IDI1P15496 288 aa5.25□□□□□ -1.57
RRP42YDL111C CDC3P32457 520 aaKnown RBP5.25□□□□□ -1.57
RRP42YDL111C SFA1P32771 386 aa5.25□□□□□ -1.57
RRP42YDL111C SLD2P34252 453 aa5.25□□□□□ -1.57
RRP42YDL111C RRM3P38766 723 aa5.25□□□□□ -1.57
RRP42YDL111C DYS1P38791 387 aa5.25□□□□□ -1.57
RRP42YDL111C YER156CP40093 338 aaKnown RBP5.25□□□□□ -1.57
RRP42YDL111C AVT1P47082 602 aa5.25□□□□□ -1.57
RRP42YDL111C ARI1P53111 347 aaKnown RBP5.25□□□□□ -1.57
RRP42YDL111C PUF6Q04373 656 aaKnown RBP5.25□□□□□ -1.57
RRP42YDL111C YOR296WQ08748 1289 aa5.25□□□□□ -1.57
RRP42YDL111C SLP1Q12232 587 aa5.25□□□□□ -1.57
RRP42YDL111C MRP10O75012 95 aa5.24□□□□□ -1.57
RRP42YDL111C NOB1Q08444 459 aaKnown RBP5.24□□□□□ -1.57
RRP42YDL111C ALD4P46367 519 aaKnown RBP5.23□□□□□ -1.57
RRP42YDL111C FOX2Q02207 900 aaKnown RBP5.23□□□□□ -1.57
RRP42YDL111C LDH1P38139 375 aa5.22□□□□□ -1.57
RRP42YDL111C GIP1P38229 639 aa5.22□□□□□ -1.57
RRP42YDL111C ISC10P32645 267 aa5.21□□□□□ -1.58
RRP42YDL111C BSD2P38356 321 aa5.21□□□□□ -1.58
RRP42YDL111C PUN1Q06991 263 aa5.21□□□□□ -1.58
RRP42YDL111C SRS2P12954 1174 aa5.2□□□□□ -1.58
RRP42YDL111C CWC15Q03772 175 aaKnown RBP5.2□□□□□ -1.58
RRP42YDL111C TY4B-PA0A0B7P3V8 1104 aa5.19□□□□□ -1.58
RRP42YDL111C COQ2P32378 372 aa5.19□□□□□ -1.58
RRP42YDL111C ISW1P38144 1129 aa5.19□□□□□ -1.58
RRP42YDL111C SSF1P38789 453 aaPredicted RBP5.19□□□□□ -1.58
RRP42YDL111C YML083CQ04526 418 aa5.19□□□□□ -1.58
RRP42YDL111C RSC2Q06488 889 aa5.19□□□□□ -1.58
RRP42YDL111C TY4A-HQ6Q5P6 413 aa5.19□□□□□ -1.58
RRP42YDL111C MSN1P22148 382 aa5.18□□□□□ -1.58
RRP42YDL111C RSC6P25632 483 aa5.18□□□□□ -1.58
RRP42YDL111C LIP5P32875 414 aa5.18□□□□□ -1.58
RRP42YDL111C YIL165CP40446 119 aa5.18□□□□□ -1.58
RRP42YDL111C KAE1P36132 386 aa5.17□□□□□ -1.58
RRP42YDL111C YKR073CP36153 106 aa5.17□□□□□ -1.58
RRP42YDL111C GIP2P40036 548 aa5.17□□□□□ -1.58
RRP42YDL111C MED7Q08278 222 aa5.17□□□□□ -1.58
RRP42YDL111C AIM44Q99299 758 aa5.17□□□□□ -1.58
RRP42YDL111C TRP3P00937 484 aa5.16□□□□□ -1.58
RRP42YDL111C TED1P40533 473 aa5.16□□□□□ -1.58
RRP42YDL111C TY1A-NL1Q12391 440 aaKnown RBP5.16□□□□□ -1.58
RRP42YDL111C HEM3P28789 327 aa5.15□□□□□ -1.59
RRP42YDL111C SOK2P53438 785 aaPredicted RBP5.15□□□□□ -1.59
RRP42YDL111C DSE4P53753 1117 aa5.15□□□□□ -1.59
RRP42YDL111C YLR122CQ12312 125 aa5.15□□□□□ -1.59
RRP42YDL111C TOS1P38288 455 aa5.14□□□□□ -1.59
RRP42YDL111C SAF1P38352 637 aa5.14□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 49.5 ms