RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C RIM15P43565 1770 aa2.5□□□□□ -2.01
BRE1YDL074C VAS1P07806 1104 aaKnown RBP2.5□□□□□ -2.01
BRE1YDL074C CDC16P09798 840 aa2.5□□□□□ -2.01
BRE1YDL074C RNR2P09938 399 aaKnown RBP2.5□□□□□ -2.01
BRE1YDL074C PCT1P13259 424 aa2.5□□□□□ -2.01
BRE1YDL074C OSM1P21375 501 aaKnown RBP2.5□□□□□ -2.01
BRE1YDL074C SIS2P36024 562 aa2.5□□□□□ -2.01
BRE1YDL074C SLI15P38283 698 aa2.5□□□□□ -2.01
BRE1YDL074C SSP1P38871 571 aa2.5□□□□□ -2.01
BRE1YDL074C BOI2P39969 1040 aa2.5□□□□□ -2.01
BRE1YDL074C MLC1P53141 149 aa2.5□□□□□ -2.01
BRE1YDL074C IMH1Q06704 911 aaKnown RBP2.5□□□□□ -2.01
BRE1YDL074C ENV9Q08651 330 aa2.5□□□□□ -2.01
BRE1YDL074C NOP53Q12080 455 aaKnown RBP2.5□□□□□ -2.01
BRE1YDL074C SRS2P12954 1174 aa2.49□□□□□ -2.01
BRE1YDL074C RAD24P32641 659 aa2.49□□□□□ -2.01
BRE1YDL074C PRP40P33203 583 aaKnown RBP2.49□□□□□ -2.01
BRE1YDL074C MNN4P36044 1178 aa2.49□□□□□ -2.01
BRE1YDL074C NUP133P36161 1157 aa2.49□□□□□ -2.01
BRE1YDL074C YJL181WP46987 611 aa2.49□□□□□ -2.01
BRE1YDL074C FPR4Q06205 392 aaPredicted RBP2.49□□□□□ -2.01
BRE1YDL074C BRE1Q07457 700 aaKnown RBP2.49□□□□□ -2.01
BRE1YDL074C ALE1Q08548 619 aa2.49□□□□□ -2.01
BRE1YDL074C PHM7Q12252 991 aa2.49□□□□□ -2.01
BRE1YDL074C PDR18P53756 1333 aa2.49□□□□□ -2.01
BRE1YDL074C DLD1P32891 587 aa2.48□□□□□ -2.01
BRE1YDL074C EBP2P36049 427 aaKnown RBP2.48□□□□□ -2.01
BRE1YDL074C OSH3P38713 996 aaKnown RBP2.48□□□□□ -2.01
BRE1YDL074C UBP12P39538 1254 aa2.48□□□□□ -2.01
BRE1YDL074C ENP2P48234 707 aaKnown RBP2.48□□□□□ -2.01
BRE1YDL074C CLA4P48562 842 aa2.48□□□□□ -2.01
BRE1YDL074C PKH1Q03407 766 aa2.48□□□□□ -2.01
BRE1YDL074C ETT1Q08421 412 aaKnown RBP2.48□□□□□ -2.01
BRE1YDL074C YDL176WQ12027 708 aa2.48□□□□□ -2.01
BRE1YDL074C ROX1P25042 368 aa2.48□□□□□ -2.01
BRE1YDL074C TTI1P36097 1038 aa2.48□□□□□ -2.01
BRE1YDL074C SPO22P40511 975 aa2.48□□□□□ -2.01
BRE1YDL074C ADE16P54113 591 aaKnown RBP2.48□□□□□ -2.01
BRE1YDL074C VPS64Q03944 604 aa2.48□□□□□ -2.01
BRE1YDL074C ISU2Q12056 156 aa2.48□□□□□ -2.01
BRE1YDL074C SNU66Q12420 587 aaPredicted RBP2.48□□□□□ -2.01
BRE1YDL074C MSP1P28737 362 aa2.47□□□□□ -2.01
BRE1YDL074C MRF1P30775 413 aaPredicted RBP2.47□□□□□ -2.01
BRE1YDL074C SET1P38827 1080 aaKnown RBP2.47□□□□□ -2.01
BRE1YDL074C RSM25P40496 264 aa2.47□□□□□ -2.01
BRE1YDL074C PEX14P53112 341 aa2.47□□□□□ -2.01
BRE1YDL074C DIB1Q06819 143 aaPredicted RBP2.47□□□□□ -2.01
BRE1YDL074C PSH1Q12161 406 aa2.47□□□□□ -2.01
BRE1YDL074C RLF2Q12495 606 aa2.47□□□□□ -2.01
BRE1YDL074C SWI1P09547 1314 aa2.47□□□□□ -2.01
BRE1YDL074C SSK22P25390 1331 aaPredicted RBP2.47□□□□□ -2.01
BRE1YDL074C PIF1P07271 859 aa2.47□□□□□ -2.01
BRE1YDL074C LPD1P09624 499 aaKnown RBP2.47□□□□□ -2.01
BRE1YDL074C BIK1P11709 440 aa2.47□□□□□ -2.01
BRE1YDL074C TAF13P11747 167 aa2.47□□□□□ -2.01
BRE1YDL074C PDR1P12383 1068 aa2.47□□□□□ -2.01
BRE1YDL074C UBP1P25037 809 aa2.47□□□□□ -2.01
BRE1YDL074C ARL1P38116 183 aaKnown RBP2.47□□□□□ -2.01
BRE1YDL074C ECM21P38167 1117 aaKnown RBP2.47□□□□□ -2.01
BRE1YDL074C BRN1P38170 754 aa2.47□□□□□ -2.01
BRE1YDL074C STM1P39015 273 aaKnown RBP2.47□□□□□ -2.01
BRE1YDL074C BDH2P39713 417 aa2.47□□□□□ -2.01
BRE1YDL074C HYR1P40581 163 aaKnown RBP2.47□□□□□ -2.01
BRE1YDL074C KRI1P42846 591 aaKnown RBP2.47□□□□□ -2.01
BRE1YDL074C YGL242CP53066 181 aa2.47□□□□□ -2.01
BRE1YDL074C PIL1P53252 339 aaKnown RBP2.47□□□□□ -2.01
BRE1YDL074C YGR273CP53329 174 aa2.47□□□□□ -2.01
BRE1YDL074C FRK1Q03002 865 aaPredicted RBP2.47□□□□□ -2.01
BRE1YDL074C PSK2Q08217 1101 aa2.47□□□□□ -2.01
BRE1YDL074C AIM44Q99299 758 aa2.47□□□□□ -2.01
BRE1YDL074C UTP10P42945 1769 aaKnown RBP2.46□□□□□ -2.02
BRE1YDL074C KEX1P09620 729 aa2.46□□□□□ -2.02
BRE1YDL074C NPL4P33755 580 aa2.46□□□□□ -2.02
BRE1YDL074C GEF1P37020 779 aa2.46□□□□□ -2.02
BRE1YDL074C HST1P53685 503 aa2.46□□□□□ -2.02
BRE1YDL074C SAC3P46674 1301 aa2.46□□□□□ -2.02
BRE1YDL074C NOT3P06102 836 aaKnown RBP2.45□□□□□ -2.02
BRE1YDL074C OPI1P21957 404 aa2.45□□□□□ -2.02
BRE1YDL074C KTR1P27810 393 aaKnown RBP2.45□□□□□ -2.02
BRE1YDL074C LSB3P43603 459 aaKnown RBP2.45□□□□□ -2.02
BRE1YDL074C FAR11P53917 953 aa2.45□□□□□ -2.02
BRE1YDL074C RAT1Q02792 1006 aaKnown RBP2.45□□□□□ -2.02
BRE1YDL074C YDR444WQ04093 687 aa2.45□□□□□ -2.02
BRE1YDL074C HAT1Q12341 374 aa2.45□□□□□ -2.02
BRE1YDL074C COBP00163 385 aa2.45□□□□□ -2.02
BRE1YDL074C RPL19AP0CX82 189 aaKnown RBP2.45□□□□□ -2.02
BRE1YDL074C RPL19BP0CX83 189 aaPredicted RBP2.45□□□□□ -2.02
BRE1YDL074C MAK11P20484 414 aaKnown RBP2.45□□□□□ -2.02
BRE1YDL074C SWC3P31376 625 aa2.45□□□□□ -2.02
BRE1YDL074C NUG1P40010 520 aaKnown RBP2.45□□□□□ -2.02
BRE1YDL074C TEA1P47988 759 aa2.45□□□□□ -2.02
BRE1YDL074C UTP22P53254 1237 aaPredicted RBP2.45□□□□□ -2.02
BRE1YDL074C ZDS2P54786 942 aa2.45□□□□□ -2.02
BRE1YDL074C RIM20Q12033 661 aa2.45□□□□□ -2.02
BRE1YDL074C PSF3Q12146 194 aa2.45□□□□□ -2.02
BRE1YDL074C SSF2Q12153 453 aaPredicted RBP2.45□□□□□ -2.02
BRE1YDL074C BUG1Q12191 341 aa2.45□□□□□ -2.02
BRE1YDL074C DUR1,2P32528 1835 aaKnown RBP2.44□□□□□ -2.02
BRE1YDL074C SER1P33330 395 aaKnown RBP2.44□□□□□ -2.02
BRE1YDL074C PBY1P38254 753 aa2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 34.2 ms