RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 GOLGA2Q08379 1002 aa22.53■■□□□ 1.2
PHGDH-211ENST00000641213 DUSP27Q5VZP5 1158 aa22.53■■□□□ 1.2
PHGDH-211ENST00000641213 ALKQ9UM73 1620 aa22.52■■□□□ 1.2
PHGDH-211ENST00000641213 SENP3Q9H4L4 574 aaPredicted RBP22.52■■□□□ 1.2
PHGDH-211ENST00000641213 STK26Q9P289 416 aa22.52■■□□□ 1.2
PHGDH-211ENST00000641213 ANKRD36BQ8N2N9 1353 aa22.52■■□□□ 1.2
PHGDH-211ENST00000641213 SPATA31D1Q6ZQQ2 1576 aa22.51■■□□□ 1.19
PHGDH-211ENST00000641213 CGNL1Q0VF96 1302 aa22.51■■□□□ 1.19
PHGDH-211ENST00000641213 SAFB2Q14151 953 aaKnown RBP eCLIP22.51■■□□□ 1.19
PHGDH-211ENST00000641213 APAF1O14727 1248 aa22.5■■□□□ 1.19
PHGDH-211ENST00000641213 CABP2Q9NPB3 220 aa22.5■■□□□ 1.19
PHGDH-211ENST00000641213 YTHDC2Q9H6S0 1430 aaKnown RBP22.5■■□□□ 1.19
PHGDH-211ENST00000641213 ARHGEF40Q8TER5 1519 aa22.5■■□□□ 1.19
PHGDH-211ENST00000641213 PLIN1O60240 522 aa22.5■■□□□ 1.19
PHGDH-211ENST00000641213 FANCIQ9NVI1 1328 aa22.49■■□□□ 1.19
PHGDH-211ENST00000641213 SLFN5Q08AF3 891 aa22.48■■□□□ 1.19
PHGDH-211ENST00000641213 TNNT2P45379 298 aaPredicted RBP22.47■■□□□ 1.19
PHGDH-211ENST00000641213 TRMT2AQ8IZ69 625 aaKnown RBP22.46■■□□□ 1.19
PHGDH-211ENST00000641213 STAG3Q9UJ98 1225 aa22.46■■□□□ 1.19
PHGDH-211ENST00000641213 NSD2O96028 1365 aa22.46■■□□□ 1.19
PHGDH-211ENST00000641213 A2ML1A8K2U0 1454 aa22.46■■□□□ 1.19
PHGDH-211ENST00000641213 NINLQ9Y2I6 1382 aa22.45■■□□□ 1.19
PHGDH-211ENST00000641213 SETD1AO15047 1707 aaKnown RBP22.45■■□□□ 1.18
PHGDH-211ENST00000641213 NGEFQ8N5V2 710 aa22.45■■□□□ 1.18
PHGDH-211ENST00000641213 PRAM1Q96QH2 718 aa22.44■■□□□ 1.18
PHGDH-211ENST00000641213 ANKRD26Q9UPS8 1709 aa22.44■■□□□ 1.18
PHGDH-211ENST00000641213 SRPK2P78362 688 aaKnown RBP22.43■■□□□ 1.18
PHGDH-211ENST00000641213 MLECQ14165 292 aa22.43■■□□□ 1.18
PHGDH-211ENST00000641213 CRBNQ96SW2 442 aa22.42■■□□□ 1.18
PHGDH-211ENST00000641213 MINK1Q8N4C8 1332 aaPredicted RBP22.42■■□□□ 1.18
PHGDH-211ENST00000641213 A0A1W2PP64 1363 aa22.42■■□□□ 1.18
PHGDH-211ENST00000641213 SPINK5Q9NQ38 1064 aaPredicted RBP22.42■■□□□ 1.18
PHGDH-211ENST00000641213 POGKQ9P215 609 aa22.42■■□□□ 1.18
PHGDH-211ENST00000641213 MTHFSP49914 203 aa22.41■■□□□ 1.18
PHGDH-211ENST00000641213 NKTRP30414 1462 aaKnown RBP22.4■■□□□ 1.18
PHGDH-211ENST00000641213 ATAD2Q6PL18 1390 aa22.4■■□□□ 1.18
PHGDH-211ENST00000641213 ABCC11Q96J66 1382 aa22.4■■□□□ 1.18
PHGDH-211ENST00000641213 RIMS2Q9UQ26 1411 aa22.4■■□□□ 1.18
PHGDH-211ENST00000641213 E9PSI1 815 aa22.38■■□□□ 1.17
PHGDH-211ENST00000641213 MSH5O43196 834 aa22.38■■□□□ 1.17
PHGDH-211ENST00000641213 C20orf194Q5TEA3 1177 aa22.38■■□□□ 1.17
PHGDH-211ENST00000641213 DLC1Q96QB1 1528 aa22.37■■□□□ 1.17
PHGDH-211ENST00000641213 CFAP53Q96M91 514 aa22.37■■□□□ 1.17
PHGDH-211ENST00000641213 ANP32EQ9BTT0 268 aa22.37■■□□□ 1.17
PHGDH-211ENST00000641213 DMRT2Q9Y5R5 561 aa22.37■■□□□ 1.17
PHGDH-211ENST00000641213 CD163L1Q9NR16 1453 aa22.37■■□□□ 1.17
PHGDH-211ENST00000641213 IQSEC2Q5JU85 1478 aa22.37■■□□□ 1.17
PHGDH-211ENST00000641213 NRXN3Q9Y4C0 1643 aa22.36■■□□□ 1.17
PHGDH-211ENST00000641213 RUNDC1Q96C34 613 aa22.36■■□□□ 1.17
PHGDH-211ENST00000641213 KIF20BQ96Q89 1820 aa22.35■■□□□ 1.17
PHGDH-211ENST00000641213 WWC1Q8IX03 1113 aa22.35■■□□□ 1.17
PHGDH-211ENST00000641213 TERF2IPQ9NYB0 399 aa22.34■■□□□ 1.17
PHGDH-211ENST00000641213 MYT1Q01538 1121 aa22.34■■□□□ 1.17
PHGDH-211ENST00000641213 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.33■■□□□ 1.17
PHGDH-211ENST00000641213 CDK19Q9BWU1 502 aa22.33■■□□□ 1.17
PHGDH-211ENST00000641213 ZMYM3Q14202 1370 aa22.33■■□□□ 1.17
PHGDH-211ENST00000641213 MED14O60244 1454 aa22.32■■□□□ 1.16
PHGDH-211ENST00000641213 TCP11L2Q8N4U5 519 aa22.31■■□□□ 1.16
PHGDH-211ENST00000641213 NLRP1Q9C000 1473 aa22.31■■□□□ 1.16
PHGDH-211ENST00000641213 GGNBP2Q9H3C7 697 aa22.3■■□□□ 1.16
PHGDH-211ENST00000641213 ESF1Q9H501 851 aaKnown RBP22.3■■□□□ 1.16
PHGDH-211ENST00000641213 FYB1O15117 783 aa22.29■■□□□ 1.16
PHGDH-211ENST00000641213 PHF23Q9BUL5 403 aaPredicted RBP22.29■■□□□ 1.16
PHGDH-211ENST00000641213 NEUROD2Q15784 382 aa22.28■■□□□ 1.16
PHGDH-211ENST00000641213 RRP7AQ9Y3A4 280 aaKnown RBP22.28■■□□□ 1.16
PHGDH-211ENST00000641213 ADGRB2O60241 1585 aa22.27■■□□□ 1.16
PHGDH-211ENST00000641213 TCERG1O14776 1098 aaKnown RBP22.27■■□□□ 1.16
PHGDH-211ENST00000641213 WAPLQ7Z5K2 1190 aa22.27■■□□□ 1.16
PHGDH-211ENST00000641213 HDGFL2Q7Z4V5 671 aaPredicted RBP22.27■■□□□ 1.16
PHGDH-211ENST00000641213 COL3A1P02461 1466 aaPredicted RBP22.27■■□□□ 1.15
PHGDH-211ENST00000641213 KNDC1Q76NI1 1749 aa22.26■■□□□ 1.15
PHGDH-211ENST00000641213 BCAR3O75815 825 aa22.26■■□□□ 1.15
PHGDH-211ENST00000641213 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.26■■□□□ 1.15
PHGDH-211ENST00000641213 CABP1Q9NZU7 370 aa22.26■■□□□ 1.15
PHGDH-211ENST00000641213 UBR1Q8IWV7 1749 aa22.26■■□□□ 1.15
PHGDH-211ENST00000641213 U2AF1L5P0DN76 240 aaPredicted RBP22.25■■□□□ 1.15
PHGDH-211ENST00000641213 U2AF1Q01081 240 aaKnown RBP eCLIP22.25■■□□□ 1.15
PHGDH-211ENST00000641213 CCDC27Q2M243 656 aa22.24■■□□□ 1.15
PHGDH-211ENST00000641213 WDR63Q8IWG1 891 aa22.24■■□□□ 1.15
PHGDH-211ENST00000641213 NCBP3Q53F19 620 aaKnown RBP22.23■■□□□ 1.15
PHGDH-211ENST00000641213 ATP7BP35670 1465 aa22.23■■□□□ 1.15
PHGDH-211ENST00000641213 METP08581 1390 aa22.23■■□□□ 1.15
PHGDH-211ENST00000641213 TNRQ92752 1358 aa22.22■■□□□ 1.15
PHGDH-211ENST00000641213 KDM2BQ8NHM5 1336 aa22.22■■□□□ 1.15
PHGDH-211ENST00000641213 MAP2P11137 1827 aaKnown RBP22.2■■□□□ 1.14
PHGDH-211ENST00000641213 MS4A1P11836 297 aa22.2■■□□□ 1.14
PHGDH-211ENST00000641213 HDGFP51858 240 aaKnown RBP22.18■■□□□ 1.14
PHGDH-211ENST00000641213 CENPQQ7L2Z9 268 aaPredicted RBP22.17■■□□□ 1.14
PHGDH-211ENST00000641213 PLEKHF1Q96S99 279 aa22.17■■□□□ 1.14
PHGDH-211ENST00000641213 CPS1P31327 1500 aa22.17■■□□□ 1.14
PHGDH-211ENST00000641213 U2SURPO15042 1029 aaKnown RBP22.16■■□□□ 1.14
PHGDH-211ENST00000641213 TECPR2O15040 1411 aa22.16■■□□□ 1.14
PHGDH-211ENST00000641213 PNPLA6Q8IY17 1366 aa22.16■■□□□ 1.14
PHGDH-211ENST00000641213 WASLO00401 505 aaPredicted RBP22.16■■□□□ 1.14
PHGDH-211ENST00000641213 TMEM2Q9UHN6 1383 aa22.15■■□□□ 1.14
PHGDH-211ENST00000641213 PDE4AP27815 886 aa22.15■■□□□ 1.14
PHGDH-211ENST00000641213 TXNDC2Q86VQ3 553 aa22.15■■□□□ 1.14
PHGDH-211ENST00000641213 FAM135BQ49AJ0 1406 aa22.15■■□□□ 1.14
PHGDH-211ENST00000641213 PDE3AQ14432 1141 aa22.15■■□□□ 1.14
PHGDH-211ENST00000641213 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms