RNA–Protein interactions for RNA: ENST00000640717.1

SPIN3-243, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-243ENST00000640717 CGNL1Q0VF96 1302 aa16.82■□□□□ 0.28
SPIN3-243ENST00000640717 KDM5AP29375 1690 aaKnown RBP16.81■□□□□ 0.28
SPIN3-243ENST00000640717 U2AF1L5P0DN76 240 aaPredicted RBP16.81■□□□□ 0.28
SPIN3-243ENST00000640717 U2AF1Q01081 240 aaKnown RBP eCLIP16.81■□□□□ 0.28
SPIN3-243ENST00000640717 PPLO60437 1756 aa16.81■□□□□ 0.28
SPIN3-243ENST00000640717 SOX12O15370 315 aa16.8■□□□□ 0.28
SPIN3-243ENST00000640717 GLI2P10070 1586 aa16.8■□□□□ 0.28
SPIN3-243ENST00000640717 ARHGAP31Q2M1Z3 1444 aa16.8■□□□□ 0.28
SPIN3-243ENST00000640717 GOLGA2Q08379 1002 aa16.8■□□□□ 0.28
SPIN3-243ENST00000640717 MYOM1P52179 1685 aa16.8■□□□□ 0.28
SPIN3-243ENST00000640717 IFT172Q9UG01 1749 aa16.79■□□□□ 0.28
SPIN3-243ENST00000640717 SLC24A1O60721 1099 aa16.79■□□□□ 0.28
SPIN3-243ENST00000640717 CRBNQ96SW2 442 aa16.78■□□□□ 0.28
SPIN3-243ENST00000640717 ZRANB1Q9UGI0 708 aa16.78■□□□□ 0.28
SPIN3-243ENST00000640717 YTHDC2Q9H6S0 1430 aaKnown RBP16.78■□□□□ 0.28
SPIN3-243ENST00000640717 A0A1W2PP64 1363 aa16.78■□□□□ 0.28
SPIN3-243ENST00000640717 CLTCQ00610 1675 aaKnown RBP16.77■□□□□ 0.28
SPIN3-243ENST00000640717 BCL2L13Q9BXK5 485 aa16.77■□□□□ 0.28
SPIN3-243ENST00000640717 RIMS2Q9UQ26 1411 aa16.77■□□□□ 0.27
SPIN3-243ENST00000640717 BCAR3O75815 825 aa16.76■□□□□ 0.27
SPIN3-243ENST00000640717 DUSP27Q5VZP5 1158 aa16.76■□□□□ 0.27
SPIN3-243ENST00000640717 QRICH2Q9H0J4 1663 aa16.76■□□□□ 0.27
SPIN3-243ENST00000640717 BLMP54132 1417 aaPredicted RBP16.76■□□□□ 0.27
SPIN3-243ENST00000640717 METP08581 1390 aa16.76■□□□□ 0.27
SPIN3-243ENST00000640717 PDE3BQ13370 1112 aa16.76■□□□□ 0.27
SPIN3-243ENST00000640717 RBM33Q96EV2 1170 aaKnown RBP16.76■□□□□ 0.27
SPIN3-243ENST00000640717 PLEKHG5O94827 1062 aa16.75■□□□□ 0.27
SPIN3-243ENST00000640717 PREX1Q8TCU6 1659 aa16.75■□□□□ 0.27
SPIN3-243ENST00000640717 TULP4Q9NRJ4 1543 aa16.75■□□□□ 0.27
SPIN3-243ENST00000640717 FYB1O15117 783 aa16.75■□□□□ 0.27
SPIN3-243ENST00000640717 TCP11L2Q8N4U5 519 aa16.75■□□□□ 0.27
SPIN3-243ENST00000640717 SBNO2Q9Y2G9 1366 aa16.74■□□□□ 0.27
SPIN3-243ENST00000640717 KIAA1210Q9ULL0 1709 aa16.74■□□□□ 0.27
SPIN3-243ENST00000640717 LTKP29376 864 aa16.73■□□□□ 0.27
SPIN3-243ENST00000640717 RNF123Q5XPI4 1314 aa16.73■□□□□ 0.27
SPIN3-243ENST00000640717 TERF2IPQ9NYB0 399 aa16.73■□□□□ 0.27
SPIN3-243ENST00000640717 TMEM131LA2VDJ0 1609 aa16.72■□□□□ 0.27
SPIN3-243ENST00000640717 A2ML1A8K2U0 1454 aa16.72■□□□□ 0.27
SPIN3-243ENST00000640717 FRAT1Q92837 279 aaPredicted RBP16.72■□□□□ 0.27
SPIN3-243ENST00000640717 CFAP53Q96M91 514 aa16.72■□□□□ 0.27
SPIN3-243ENST00000640717 HDGFL2Q7Z4V5 671 aaPredicted RBP16.72■□□□□ 0.27
SPIN3-243ENST00000640717 ZMYM4Q5VZL5 1548 aa16.71■□□□□ 0.27
SPIN3-243ENST00000640717 ANKRD36BQ8N2N9 1353 aa16.71■□□□□ 0.27
SPIN3-243ENST00000640717 ERICH6BQ5W0A0 696 aa16.71■□□□□ 0.27
SPIN3-243ENST00000640717 SETBP1Q9Y6X0 1596 aa16.71■□□□□ 0.26
SPIN3-243ENST00000640717 SLFN5Q08AF3 891 aa16.7■□□□□ 0.26
SPIN3-243ENST00000640717 NME9Q86XW9 330 aa16.7■□□□□ 0.26
SPIN3-243ENST00000640717 NEURL4Q96JN8 1562 aa16.7■□□□□ 0.26
SPIN3-243ENST00000640717 WWC1Q8IX03 1113 aa16.7■□□□□ 0.26
SPIN3-243ENST00000640717 TNRQ92752 1358 aa16.69■□□□□ 0.26
SPIN3-243ENST00000640717 NPC1L1Q9UHC9 1359 aa16.68■□□□□ 0.26
SPIN3-243ENST00000640717 PTPRMP28827 1452 aa16.68■□□□□ 0.26
SPIN3-243ENST00000640717 HMOX1P09601 288 aa16.68■□□□□ 0.26
SPIN3-243ENST00000640717 ALKQ9UM73 1620 aa16.68■□□□□ 0.26
SPIN3-243ENST00000640717 CANXP27824 592 aaKnown RBP16.68■□□□□ 0.26
SPIN3-243ENST00000640717 KIF13AQ9H1H9 1805 aa16.68■□□□□ 0.26
SPIN3-243ENST00000640717 RRS1Q15050 365 aaKnown RBP16.67■□□□□ 0.26
SPIN3-243ENST00000640717 TSR2Q969E8 191 aaKnown RBP16.67■□□□□ 0.26
SPIN3-243ENST00000640717 EMILIN1Q9Y6C2 1016 aa16.67■□□□□ 0.26
SPIN3-243ENST00000640717 PMFBP1Q8TBY8 1022 aa16.66■□□□□ 0.26
SPIN3-243ENST00000640717 CLUAP1Q96AJ1 413 aa16.66■□□□□ 0.26
SPIN3-243ENST00000640717 ZNF521Q96K83 1311 aa16.66■□□□□ 0.26
SPIN3-243ENST00000640717 RUNDC1Q96C34 613 aa16.66■□□□□ 0.26
SPIN3-243ENST00000640717 NUDT16Q96DE0 195 aaKnown RBP16.66■□□□□ 0.26
SPIN3-243ENST00000640717 ARHGEF28Q8N1W1 1705 aaKnown RBP16.65■□□□□ 0.26
SPIN3-243ENST00000640717 NPM2Q86SE8 214 aaKnown RBP16.65■□□□□ 0.26
SPIN3-243ENST00000640717 PPP6R1Q9UPN7 881 aa16.65■□□□□ 0.26
SPIN3-243ENST00000640717 TNNQ9UQP3 1299 aa16.65■□□□□ 0.26
SPIN3-243ENST00000640717 LAS1LQ9Y4W2 734 aaKnown RBP16.65■□□□□ 0.26
SPIN3-243ENST00000640717 WASLO00401 505 aaPredicted RBP16.65■□□□□ 0.26
SPIN3-243ENST00000640717 ZC3H13Q5T200 1668 aaKnown RBP16.64■□□□□ 0.25
SPIN3-243ENST00000640717 ZFYVE9O95405 1425 aa16.63■□□□□ 0.25
SPIN3-243ENST00000640717 PANK1Q8TE04 598 aa16.63■□□□□ 0.25
SPIN3-243ENST00000640717 POLR3AO14802 1390 aaPredicted RBP16.63■□□□□ 0.25
SPIN3-243ENST00000640717 ATAD2Q6PL18 1390 aa16.63■□□□□ 0.25
SPIN3-243ENST00000640717 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.63■□□□□ 0.25
SPIN3-243ENST00000640717 THUMPD2Q9BTF0 503 aaKnown RBP16.62■□□□□ 0.25
SPIN3-243ENST00000640717 NUTM2GQ5VZR2 741 aa16.62■□□□□ 0.25
SPIN3-243ENST00000640717 MYO3AQ8NEV4 1616 aa16.61■□□□□ 0.25
SPIN3-243ENST00000640717 E9PSI1 815 aa16.61■□□□□ 0.25
SPIN3-243ENST00000640717 ARHGEF40Q8TER5 1519 aa16.61■□□□□ 0.25
SPIN3-243ENST00000640717 COG6Q9Y2V7 657 aa16.61■□□□□ 0.25
SPIN3-243ENST00000640717 AGLP35573 1532 aa16.6■□□□□ 0.25
SPIN3-243ENST00000640717 HDGFP51858 240 aaKnown RBP16.6■□□□□ 0.25
SPIN3-243ENST00000640717 ROBO2Q9HCK4 1378 aa16.6■□□□□ 0.25
SPIN3-243ENST00000640717 EID1Q9Y6B2 187 aa16.6■□□□□ 0.25
SPIN3-243ENST00000640717 MAPK8IP3Q9UPT6 1336 aa16.6■□□□□ 0.25
SPIN3-243ENST00000640717 ABCC11Q96J66 1382 aa16.59■□□□□ 0.25
SPIN3-243ENST00000640717 TMEM2Q9UHN6 1383 aa16.59■□□□□ 0.25
SPIN3-243ENST00000640717 MSH5O43196 834 aa16.59■□□□□ 0.25
SPIN3-243ENST00000640717 DIAPH1O60610 1272 aaKnown RBP16.59■□□□□ 0.25
SPIN3-243ENST00000640717 PRR36Q9H6K5 1346 aa16.59■□□□□ 0.25
SPIN3-243ENST00000640717 TCERG1O14776 1098 aaKnown RBP16.59■□□□□ 0.25
SPIN3-243ENST00000640717 POLKQ9UBT6 870 aa16.59■□□□□ 0.25
SPIN3-243ENST00000640717 AMOTL2Q9Y2J4 779 aa16.59■□□□□ 0.25
SPIN3-243ENST00000640717 PPIP5K1Q6PFW1 1433 aa16.58■□□□□ 0.24
SPIN3-243ENST00000640717 CCDC61Q9Y6R9 512 aa16.58■□□□□ 0.24
SPIN3-243ENST00000640717 CD163L1Q9NR16 1453 aa16.57■□□□□ 0.24
SPIN3-243ENST00000640717 ELL2O00472 640 aaPredicted RBP16.57■□□□□ 0.24
SPIN3-243ENST00000640717 RGS3P49796 1198 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 170.8 ms