RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-238	ENST00000640421	MINK1	Q8N4C8	1332 aa	Predicted RBP	24.78	■■□□□ 1.56
SPIN3-238	ENST00000640421	TMF1	P82094	1093 aa		24.78	■■□□□ 1.56
SPIN3-238	ENST00000640421	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	24.77	■■□□□ 1.56
SPIN3-238	ENST00000640421	POLR3GL	Q9BT43	218 aa		24.73	■■□□□ 1.55
SPIN3-238	ENST00000640421	AEBP2	Q6ZN18	517 aa	Predicted RBP	24.72	■■□□□ 1.55
SPIN3-238	ENST00000640421	DDX10	Q13206	875 aa	Known RBP	24.71	■■□□□ 1.55
SPIN3-238	ENST00000640421	RBM33	Q96EV2	1170 aa	Known RBP	24.71	■■□□□ 1.55
SPIN3-238	ENST00000640421	NKTR	P30414	1462 aa	Known RBP	24.7	■■□□□ 1.54
SPIN3-238	ENST00000640421	ADGRB2	O60241	1585 aa		24.69	■■□□□ 1.54
SPIN3-238	ENST00000640421	SLC24A1	O60721	1099 aa		24.69	■■□□□ 1.54
SPIN3-238	ENST00000640421	EVC2	Q86UK5	1308 aa		24.69	■■□□□ 1.54
SPIN3-238	ENST00000640421	NALCN	Q8IZF0	1738 aa		24.68	■■□□□ 1.54
SPIN3-238	ENST00000640421	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	24.68	■■□□□ 1.54
SPIN3-238	ENST00000640421	MYOM1	P52179	1685 aa		24.67	■■□□□ 1.54
SPIN3-238	ENST00000640421	DMRT2	Q9Y5R5	561 aa		24.67	■■□□□ 1.54
SPIN3-238	ENST00000640421	CABP2	Q9NPB3	220 aa		24.66	■■□□□ 1.54
SPIN3-238	ENST00000640421	CDK19	Q9BWU1	502 aa		24.65	■■□□□ 1.54
SPIN3-238	ENST00000640421	CDCA8	Q53HL2	280 aa		24.64	■■□□□ 1.54
SPIN3-238	ENST00000640421	WASL	O00401	505 aa	Predicted RBP	24.64	■■□□□ 1.53
SPIN3-238	ENST00000640421	PROSER2	Q86WR7	435 aa	Predicted RBP	24.62	■■□□□ 1.53
SPIN3-238	ENST00000640421	SRPK2	P78362	688 aa	Known RBP	24.62	■■□□□ 1.53
SPIN3-238	ENST00000640421	ADGRL3	Q9HAR2	1447 aa		24.6	■■□□□ 1.53
SPIN3-238	ENST00000640421	DIEXF	Q68CQ4	756 aa	Known RBP	24.6	■■□□□ 1.53
SPIN3-238	ENST00000640421	PUS7	Q96PZ0	661 aa	Known RBP	24.6	■■□□□ 1.53
SPIN3-238	ENST00000640421	TMEM94	Q12767	1356 aa		24.59	■■□□□ 1.53
SPIN3-238	ENST00000640421	XIRP1	Q702N8	1843 aa	Known RBP	24.59	■■□□□ 1.53
SPIN3-238	ENST00000640421	CDC42BPG	Q6DT37	1551 aa		24.57	■■□□□ 1.52
SPIN3-238	ENST00000640421	LRRC7	Q96NW7	1537 aa		24.57	■■□□□ 1.52
SPIN3-238	ENST00000640421	ATP7B	P35670	1465 aa		24.56	■■□□□ 1.52
SPIN3-238	ENST00000640421	PRR36	Q9H6K5	1346 aa		24.56	■■□□□ 1.52
SPIN3-238	ENST00000640421	USP32	Q8NFA0	1604 aa		24.56	■■□□□ 1.52
SPIN3-238	ENST00000640421	ATAD2	Q6PL18	1390 aa		24.55	■■□□□ 1.52
SPIN3-238	ENST00000640421	FMN2	Q9NZ56	1722 aa		24.55	■■□□□ 1.52
SPIN3-238	ENST00000640421	NUTM2F	A1L443	756 aa		24.54	■■□□□ 1.52
SPIN3-238	ENST00000640421	SLC12A5	Q9H2X9	1139 aa		24.54	■■□□□ 1.52
SPIN3-238	ENST00000640421	C14orf37	Q86TY3	774 aa		24.53	■■□□□ 1.52
SPIN3-238	ENST00000640421	TMC1	Q8TDI8	760 aa		24.52	■■□□□ 1.52
SPIN3-238	ENST00000640421	NUDT16	Q96DE0	195 aa	Known RBP	24.52	■■□□□ 1.52
SPIN3-238	ENST00000640421	PANK3	Q9H999	370 aa		24.52	■■□□□ 1.52
SPIN3-238	ENST00000640421	RGPD8	O14715	1765 aa	Predicted RBP	24.52	■■□□□ 1.52
SPIN3-238	ENST00000640421	TOPAZ1	Q8N9V7	1692 aa		24.51	■■□□□ 1.51
SPIN3-238	ENST00000640421	NCOA3	Q9Y6Q9	1424 aa		24.51	■■□□□ 1.51
SPIN3-238	ENST00000640421	LTBP4	Q8N2S1	1624 aa		24.51	■■□□□ 1.51
SPIN3-238	ENST00000640421	CD163L1	Q9NR16	1453 aa		24.49	■■□□□ 1.51
SPIN3-238	ENST00000640421	CABP1	Q9NZU7	370 aa		24.49	■■□□□ 1.51
SPIN3-238	ENST00000640421	PPIP5K1	Q6PFW1	1433 aa		24.48	■■□□□ 1.51
SPIN3-238	ENST00000640421	C19orf44	Q9H6X5	657 aa		24.48	■■□□□ 1.51
SPIN3-238	ENST00000640421	PER1	O15534	1290 aa	Predicted RBP	24.47	■■□□□ 1.51
SPIN3-238	ENST00000640421	CCDC61	Q9Y6R9	512 aa		24.47	■■□□□ 1.51
SPIN3-238	ENST00000640421	NINL	Q9Y2I6	1382 aa		24.47	■■□□□ 1.51
SPIN3-238	ENST00000640421	ANKAR	Q7Z5J8	1434 aa		24.46	■■□□□ 1.51
SPIN3-238	ENST00000640421	CARD14	Q9BXL6	1004 aa		24.45	■■□□□ 1.5
SPIN3-238	ENST00000640421	DCC	P43146	1447 aa		24.44	■■□□□ 1.5
SPIN3-238	ENST00000640421		A0A1W2PP64	1363 aa		24.44	■■□□□ 1.5
SPIN3-238	ENST00000640421	ANKRD36B	Q8N2N9	1353 aa		24.44	■■□□□ 1.5
SPIN3-238	ENST00000640421	ITSN1	Q15811	1721 aa		24.44	■■□□□ 1.5
SPIN3-238	ENST00000640421	MSH6	P52701	1360 aa		24.42	■■□□□ 1.5
SPIN3-238	ENST00000640421	MST1R	Q04912	1400 aa		24.4	■■□□□ 1.5
SPIN3-238	ENST00000640421	CPSF1	Q10570	1443 aa	Known RBP	24.4	■■□□□ 1.5
SPIN3-238	ENST00000640421	PLEKHG3	A1L390	1219 aa		24.38	■■□□□ 1.49
SPIN3-238	ENST00000640421	NSD3	Q9BZ95	1437 aa		24.38	■■□□□ 1.49
SPIN3-238	ENST00000640421	AKAP12	Q02952	1782 aa		24.38	■■□□□ 1.49
SPIN3-238	ENST00000640421	ATF3	P18847	181 aa		24.38	■■□□□ 1.49
SPIN3-238	ENST00000640421	C1orf167	Q5SNV9	1468 aa		24.38	■■□□□ 1.49
SPIN3-238	ENST00000640421	PMFBP1	Q8TBY8	1022 aa		24.37	■■□□□ 1.49
SPIN3-238	ENST00000640421	TERF2IP	Q9NYB0	399 aa		24.37	■■□□□ 1.49
SPIN3-238	ENST00000640421	ACE	P12821	1306 aa		24.35	■■□□□ 1.49
SPIN3-238	ENST00000640421	MON2	Q7Z3U7	1717 aa		24.35	■■□□□ 1.49
SPIN3-238	ENST00000640421	CADPS2	Q86UW7	1296 aa		24.35	■■□□□ 1.49
SPIN3-238	ENST00000640421	ORAI2	Q96SN7	254 aa		24.35	■■□□□ 1.49
SPIN3-238	ENST00000640421	CNGB1	Q14028	1251 aa	Predicted RBP	24.34	■■□□□ 1.49
SPIN3-238	ENST00000640421	AMER1	Q5JTC6	1135 aa	Predicted RBP	24.34	■■□□□ 1.49
SPIN3-238	ENST00000640421	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	24.34	■■□□□ 1.49
SPIN3-238	ENST00000640421	MIER1	Q8N108	512 aa		24.34	■■□□□ 1.49
SPIN3-238	ENST00000640421	KNSTRN	Q9Y448	316 aa		24.34	■■□□□ 1.49
SPIN3-238	ENST00000640421	POLR3A	O14802	1390 aa	Predicted RBP	24.34	■■□□□ 1.49
SPIN3-238	ENST00000640421	ESCO1	Q5FWF5	840 aa		24.33	■■□□□ 1.49
SPIN3-238	ENST00000640421	KTN1	Q86UP2	1357 aa	Known RBP	24.33	■■□□□ 1.48
SPIN3-238	ENST00000640421	PHF8	Q9UPP1	1060 aa		24.32	■■□□□ 1.48
SPIN3-238	ENST00000640421	NRK	Q7Z2Y5	1582 aa		24.31	■■□□□ 1.48
SPIN3-238	ENST00000640421	USP6	P35125	1406 aa		24.29	■■□□□ 1.48
SPIN3-238	ENST00000640421	ANP32C	O43423	234 aa		24.29	■■□□□ 1.48
SPIN3-238	ENST00000640421	CC2D1B	Q5T0F9	858 aa	Known RBP	24.29	■■□□□ 1.48
SPIN3-238	ENST00000640421	NGDN	Q8NEJ9	315 aa	Known RBP	24.29	■■□□□ 1.48
SPIN3-238	ENST00000640421	PRKRIP1	Q9H875	184 aa	Predicted RBP	24.29	■■□□□ 1.48
SPIN3-238	ENST00000640421	EDC4	Q6P2E9	1401 aa	Known RBP	24.28	■■□□□ 1.48
SPIN3-238	ENST00000640421	SSH2	Q76I76	1423 aa		24.27	■■□□□ 1.48
SPIN3-238	ENST00000640421	ZNF692	Q9BU19	519 aa	Predicted RBP	24.27	■■□□□ 1.48
SPIN3-238	ENST00000640421	NPC1L1	Q9UHC9	1359 aa		24.26	■■□□□ 1.47
SPIN3-238	ENST00000640421	SLAIN2	Q9P270	581 aa		24.26	■■□□□ 1.47
SPIN3-238	ENST00000640421	KIF1A	Q12756	1690 aa		24.26	■■□□□ 1.47
SPIN3-238	ENST00000640421	CGNL1	Q0VF96	1302 aa		24.25	■■□□□ 1.47
SPIN3-238	ENST00000640421	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	24.25	■■□□□ 1.47
SPIN3-238	ENST00000640421	PARD3	Q8TEW0	1356 aa		24.24	■■□□□ 1.47
SPIN3-238	ENST00000640421	KIF20B	Q96Q89	1820 aa		24.24	■■□□□ 1.47
SPIN3-238	ENST00000640421	FOXO3	O43524	673 aa		24.23	■■□□□ 1.47
SPIN3-238	ENST00000640421	FYB1	O15117	783 aa		24.22	■■□□□ 1.47
SPIN3-238	ENST00000640421	BRINP3	Q76B58	766 aa		24.22	■■□□□ 1.47
SPIN3-238	ENST00000640421	TTC21B	Q7Z4L5	1316 aa		24.22	■■□□□ 1.47
SPIN3-238	ENST00000640421	DDX17	Q92841	729 aa	Known RBP	24.21	■■□□□ 1.47

Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms