RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 DHX8Q14562 1220 aaKnown RBP13.08□□□□□ -0.32
KCNMA1-259ENST00000639406 FAM107BQ9H098 131 aa13.08□□□□□ -0.32
KCNMA1-259ENST00000639406 DYNC1I1O14576 645 aa13.08□□□□□ -0.32
KCNMA1-259ENST00000639406 XPCQ01831 940 aaPredicted RBP13.08□□□□□ -0.32
KCNMA1-259ENST00000639406 MCM4P33991 863 aa13.07□□□□□ -0.32
KCNMA1-259ENST00000639406 TRIM29Q14134 588 aa13.07□□□□□ -0.32
KCNMA1-259ENST00000639406 TOMM22Q9NS69 142 aa13.07□□□□□ -0.32
KCNMA1-259ENST00000639406 CFDP1Q9UEE9 299 aaPredicted RBP13.07□□□□□ -0.32
KCNMA1-259ENST00000639406 HDAC5Q9UQL6 1122 aa13.07□□□□□ -0.32
KCNMA1-259ENST00000639406 CARMIL2Q6F5E8 1435 aa13.06□□□□□ -0.32
KCNMA1-259ENST00000639406 NBPF1Q3BBV0 1214 aa13.06□□□□□ -0.32
KCNMA1-259ENST00000639406 DDX19BQ9UMR2 479 aa13.06□□□□□ -0.32
KCNMA1-259ENST00000639406 POLR3GO15318 223 aaPredicted RBP13.06□□□□□ -0.32
KCNMA1-259ENST00000639406 CLASRPQ8N2M8 674 aaKnown RBP13.06□□□□□ -0.32
KCNMA1-259ENST00000639406 RUFY2Q8WXA3 655 aa13.06□□□□□ -0.32
KCNMA1-259ENST00000639406 SMARCE1Q969G3 411 aa13.06□□□□□ -0.32
KCNMA1-259ENST00000639406 GTPBP4Q9BZE4 634 aaKnown RBP13.06□□□□□ -0.32
KCNMA1-259ENST00000639406 UBXN4Q92575 508 aa13.06□□□□□ -0.32
KCNMA1-259ENST00000639406 BAZ1AQ9NRL2 1556 aaPredicted RBP13.06□□□□□ -0.32
KCNMA1-259ENST00000639406 CCDC192P0DO97 292 aa13.05□□□□□ -0.32
KCNMA1-259ENST00000639406 SRPK2P78362 688 aaKnown RBP13.05□□□□□ -0.32
KCNMA1-259ENST00000639406 AKAP17AQ02040 695 aaKnown RBP13.05□□□□□ -0.32
KCNMA1-259ENST00000639406 CCDC27Q2M243 656 aa13.05□□□□□ -0.32
KCNMA1-259ENST00000639406 SDF4Q9BRK5 362 aa13.05□□□□□ -0.32
KCNMA1-259ENST00000639406 MNAT1P51948 309 aa13.04□□□□□ -0.32
KCNMA1-259ENST00000639406 WWC1Q8IX03 1113 aa13.04□□□□□ -0.32
KCNMA1-259ENST00000639406 DNAAF4Q8WXU2 420 aa13.04□□□□□ -0.32
KCNMA1-259ENST00000639406 HSP90AB2PQ58FF8 381 aa13.04□□□□□ -0.32
KCNMA1-259ENST00000639406 RBM33Q96EV2 1170 aaKnown RBP13.04□□□□□ -0.32
KCNMA1-259ENST00000639406 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.04□□□□□ -0.32
KCNMA1-259ENST00000639406 ODF2Q5BJF6 829 aa13.04□□□□□ -0.32
KCNMA1-259ENST00000639406 RRP7AQ9Y3A4 280 aaKnown RBP13.04□□□□□ -0.32
KCNMA1-259ENST00000639406 TDO2P48775 406 aa13.03□□□□□ -0.32
KCNMA1-259ENST00000639406 CDC45O75419 566 aa13.03□□□□□ -0.32
KCNMA1-259ENST00000639406 NF2P35240 595 aa13.03□□□□□ -0.32
KCNMA1-259ENST00000639406 FAM177A1Q8N128 213 aaPredicted RBP13.03□□□□□ -0.32
KCNMA1-259ENST00000639406 EIF3AQ14152 1382 aaKnown RBP13.03□□□□□ -0.32
KCNMA1-259ENST00000639406 ERLIN2O94905 339 aa13.03□□□□□ -0.32
KCNMA1-259ENST00000639406 FOSBP53539 338 aa13.03□□□□□ -0.32
KCNMA1-259ENST00000639406 ENOX2Q16206 610 aaKnown RBP13.02□□□□□ -0.32
KCNMA1-259ENST00000639406 CPLX2Q6PUV4 134 aaKnown RBP13.02□□□□□ -0.33
KCNMA1-259ENST00000639406 RABEP1Q15276 862 aa13.02□□□□□ -0.33
KCNMA1-259ENST00000639406 SYNE3Q6ZMZ3 975 aa13.02□□□□□ -0.33
KCNMA1-259ENST00000639406 CPLX1O14810 134 aa13.01□□□□□ -0.33
KCNMA1-259ENST00000639406 SOX12O15370 315 aa13.01□□□□□ -0.33
KCNMA1-259ENST00000639406 LMOD3Q0VAK6 560 aa13.01□□□□□ -0.33
KCNMA1-259ENST00000639406 FMNL2Q96PY5 1086 aa13.01□□□□□ -0.33
KCNMA1-259ENST00000639406 SPAG9O60271 1321 aaKnown RBP13.01□□□□□ -0.33
KCNMA1-259ENST00000639406 MICALCLQ6ZW33 695 aa13.01□□□□□ -0.33
KCNMA1-259ENST00000639406 TXLNBQ8N3L3 684 aa13.01□□□□□ -0.33
KCNMA1-259ENST00000639406 KIF7Q2M1P5 1343 aa13.01□□□□□ -0.33
KCNMA1-259ENST00000639406 DZIP1LQ8IYY4 767 aaKnown RBP13.01□□□□□ -0.33
KCNMA1-259ENST00000639406 KINO60870 393 aaKnown RBP13□□□□□ -0.33
KCNMA1-259ENST00000639406 VPS53Q5VIR6 699 aa13□□□□□ -0.33
KCNMA1-259ENST00000639406 FILIP1Q7Z7B0 1213 aa13□□□□□ -0.33
KCNMA1-259ENST00000639406 CLCN1P35523 988 aa13□□□□□ -0.33
KCNMA1-259ENST00000639406 CWC22Q9HCG8 908 aaKnown RBP13□□□□□ -0.33
KCNMA1-259ENST00000639406 RNF187Q5TA31 235 aaPredicted RBP13□□□□□ -0.33
KCNMA1-259ENST00000639406 GBP3Q9H0R5 595 aa13□□□□□ -0.33
KCNMA1-259ENST00000639406 LNPKQ9C0E8 428 aa13□□□□□ -0.33
KCNMA1-259ENST00000639406 SSR1P43307 286 aaKnown RBP12.99□□□□□ -0.33
KCNMA1-259ENST00000639406 FILIP1LQ4L180 1135 aa12.99□□□□□ -0.33
KCNMA1-259ENST00000639406 CSB-PGBD3P0DP91 1061 aa12.99□□□□□ -0.33
KCNMA1-259ENST00000639406 CCDC181Q5TID7 509 aa12.99□□□□□ -0.33
KCNMA1-259ENST00000639406 TAX1BP1Q86VP1 789 aa12.99□□□□□ -0.33
KCNMA1-259ENST00000639406 FIBPO43427 364 aa12.99□□□□□ -0.33
KCNMA1-259ENST00000639406 HDGFL2Q7Z4V5 671 aaPredicted RBP12.99□□□□□ -0.33
KCNMA1-259ENST00000639406 SERPINC1P01008 464 aa12.99□□□□□ -0.33
KCNMA1-259ENST00000639406 KIF2AO00139 706 aaPredicted RBP12.99□□□□□ -0.33
KCNMA1-259ENST00000639406 CLGNO14967 610 aa12.99□□□□□ -0.33
KCNMA1-259ENST00000639406 AAMPQ13685 434 aa12.99□□□□□ -0.33
KCNMA1-259ENST00000639406 PTPN14Q15678 1187 aa12.99□□□□□ -0.33
KCNMA1-259ENST00000639406 SMAP1Q8IYB5 467 aaPredicted RBP12.99□□□□□ -0.33
KCNMA1-259ENST00000639406 ZFP91Q96JP5 570 aaPredicted RBP12.99□□□□□ -0.33
KCNMA1-259ENST00000639406 TNMDQ9H2S6 317 aa12.98□□□□□ -0.33
KCNMA1-259ENST00000639406 IQCEQ6IPM2 695 aa12.98□□□□□ -0.33
KCNMA1-259ENST00000639406 CRACR2AQ9BSW2 395 aa12.98□□□□□ -0.33
KCNMA1-259ENST00000639406 GBP2P32456 591 aaPredicted RBP12.98□□□□□ -0.33
KCNMA1-259ENST00000639406 TRIM34Q9BYJ4 488 aa12.97□□□□□ -0.33
KCNMA1-259ENST00000639406 OFD1O75665 1012 aa12.97□□□□□ -0.33
KCNMA1-259ENST00000639406 LMAN1P49257 510 aa12.97□□□□□ -0.33
KCNMA1-259ENST00000639406 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.97□□□□□ -0.33
KCNMA1-259ENST00000639406 CCDC94Q9BW85 323 aaPredicted RBP12.97□□□□□ -0.33
KCNMA1-259ENST00000639406 K7ELQ4 463 aaPredicted RBP12.97□□□□□ -0.33
KCNMA1-259ENST00000639406 KRT222Q8N1A0 295 aa12.96□□□□□ -0.33
KCNMA1-259ENST00000639406 CIZ1Q9ULV3 898 aaPredicted RBP12.96□□□□□ -0.33
KCNMA1-259ENST00000639406 CTR9Q6PD62 1173 aa12.96□□□□□ -0.33
KCNMA1-259ENST00000639406 MCM5P33992 734 aa12.96□□□□□ -0.34
KCNMA1-259ENST00000639406 MCM2P49736 904 aa12.96□□□□□ -0.34
KCNMA1-259ENST00000639406 BMS1Q14692 1282 aaKnown RBP12.96□□□□□ -0.34
KCNMA1-259ENST00000639406 PRIMPOLQ96LW4 560 aa12.96□□□□□ -0.34
KCNMA1-259ENST00000639406 MPHOSPH9Q99550 1183 aa12.96□□□□□ -0.34
KCNMA1-259ENST00000639406 SYCE3A1L190 88 aa12.96□□□□□ -0.34
KCNMA1-259ENST00000639406 BRPF1P55201 1214 aaPredicted RBP12.96□□□□□ -0.34
KCNMA1-259ENST00000639406 PKD2Q13563 968 aa12.96□□□□□ -0.34
KCNMA1-259ENST00000639406 SEPT7Q16181 437 aaKnown RBP12.96□□□□□ -0.34
KCNMA1-259ENST00000639406 KIF18AQ8NI77 898 aa12.96□□□□□ -0.34
KCNMA1-259ENST00000639406 PPFIBP1Q86W92 1011 aa12.95□□□□□ -0.34
KCNMA1-259ENST00000639406 L3MBTL2Q969R5 705 aa12.95□□□□□ -0.34
KCNMA1-259ENST00000639406 SLC26A8Q96RN1 970 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms