RNA–Protein interactions for RNA: ENST00000638237.1

NECAP1-210, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene NECAP1, Length 2,517 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-210ENST00000638237 SLC12A5Q9H2X9 1139 aa11.35□□□□□ -0.59
NECAP1-210ENST00000638237 GLI2P10070 1586 aa11.35□□□□□ -0.59
NECAP1-210ENST00000638237 PIK3C2BO00750 1634 aa11.35□□□□□ -0.59
NECAP1-210ENST00000638237 ARHGEF28Q8N1W1 1705 aaKnown RBP11.34□□□□□ -0.59
NECAP1-210ENST00000638237 LAS1LQ9Y4W2 734 aaKnown RBP11.34□□□□□ -0.59
NECAP1-210ENST00000638237 C14orf93Q9H972 538 aaKnown RBP11.34□□□□□ -0.59
NECAP1-210ENST00000638237 NEXMIFQ5QGS0 1516 aa11.34□□□□□ -0.59
NECAP1-210ENST00000638237 IDI1Q13907 227 aa11.33□□□□□ -0.6
NECAP1-210ENST00000638237 DDRGK1Q96HY6 314 aa11.33□□□□□ -0.6
NECAP1-210ENST00000638237 NSD3Q9BZ95 1437 aa11.33□□□□□ -0.6
NECAP1-210ENST00000638237 C20orf194Q5TEA3 1177 aa11.33□□□□□ -0.6
NECAP1-210ENST00000638237 SKAP1Q86WV1 359 aa11.33□□□□□ -0.6
NECAP1-210ENST00000638237 SBNO2Q9Y2G9 1366 aa11.32□□□□□ -0.6
NECAP1-210ENST00000638237 SPINK5Q9NQ38 1064 aaPredicted RBP11.32□□□□□ -0.6
NECAP1-210ENST00000638237 PREX1Q8TCU6 1659 aa11.31□□□□□ -0.6
NECAP1-210ENST00000638237 APAF1O14727 1248 aa11.31□□□□□ -0.6
NECAP1-210ENST00000638237 DUSP27Q5VZP5 1158 aa11.31□□□□□ -0.6
NECAP1-210ENST00000638237 CRBNQ96SW2 442 aa11.31□□□□□ -0.6
NECAP1-210ENST00000638237 RTN4Q9NQC3 1192 aaKnown RBP11.31□□□□□ -0.6
NECAP1-210ENST00000638237 NPC1L1Q9UHC9 1359 aa11.31□□□□□ -0.6
NECAP1-210ENST00000638237 ARXQ96QS3 562 aa11.31□□□□□ -0.6
NECAP1-210ENST00000638237 STK26Q9P289 416 aa11.31□□□□□ -0.6
NECAP1-210ENST00000638237 FBXO31Q5XUX0 539 aaPredicted RBP11.3□□□□□ -0.6
NECAP1-210ENST00000638237 IL27Q8NEV9 243 aa11.3□□□□□ -0.6
NECAP1-210ENST00000638237 DMRT2Q9Y5R5 561 aa11.3□□□□□ -0.6
NECAP1-210ENST00000638237 ZNF521Q96K83 1311 aa11.3□□□□□ -0.6
NECAP1-210ENST00000638237 FAM69CQ0P6D2 419 aa11.3□□□□□ -0.6
NECAP1-210ENST00000638237 RIMBP3CA6NJZ7 1639 aa11.3□□□□□ -0.6
NECAP1-210ENST00000638237 RIMBP3BA6NNM3 1639 aa11.3□□□□□ -0.6
NECAP1-210ENST00000638237 RIMBP3Q9UFD9 1639 aa11.3□□□□□ -0.6
NECAP1-210ENST00000638237 TULP4Q9NRJ4 1543 aa11.29□□□□□ -0.6
NECAP1-210ENST00000638237 SHPRHQ149N8 1683 aa11.29□□□□□ -0.6
NECAP1-210ENST00000638237 KDM2BQ8NHM5 1336 aa11.29□□□□□ -0.6
NECAP1-210ENST00000638237 CABP2Q9NPB3 220 aa11.29□□□□□ -0.6
NECAP1-210ENST00000638237 GOLGA2Q08379 1002 aa11.28□□□□□ -0.6
NECAP1-210ENST00000638237 TMEM131LA2VDJ0 1609 aa11.27□□□□□ -0.61
NECAP1-210ENST00000638237 DIP2BQ9P265 1576 aa11.27□□□□□ -0.61
NECAP1-210ENST00000638237 VGFO15240 615 aaPredicted RBP11.27□□□□□ -0.61
NECAP1-210ENST00000638237 NEUROD2Q15784 382 aa11.27□□□□□ -0.61
NECAP1-210ENST00000638237 MORC1Q86VD1 984 aa11.27□□□□□ -0.61
NECAP1-210ENST00000638237 RPGRIP1LQ68CZ1 1315 aa11.26□□□□□ -0.61
NECAP1-210ENST00000638237 CENPQQ7L2Z9 268 aaPredicted RBP11.26□□□□□ -0.61
NECAP1-210ENST00000638237 RRP7AQ9Y3A4 280 aaKnown RBP11.26□□□□□ -0.61
NECAP1-210ENST00000638237 MLECQ14165 292 aa11.25□□□□□ -0.61
NECAP1-210ENST00000638237 ARHGAP31Q2M1Z3 1444 aa11.25□□□□□ -0.61
NECAP1-210ENST00000638237 SLFN5Q08AF3 891 aa11.25□□□□□ -0.61
NECAP1-210ENST00000638237 ANO8Q9HCE9 1232 aaPredicted RBP11.25□□□□□ -0.61
NECAP1-210ENST00000638237 GSE1Q14687 1217 aa11.24□□□□□ -0.61
NECAP1-210ENST00000638237 CLTCQ00610 1675 aaKnown RBP11.24□□□□□ -0.61
NECAP1-210ENST00000638237 MINK1Q8N4C8 1332 aaPredicted RBP11.24□□□□□ -0.61
NECAP1-210ENST00000638237 NFKBIBQ15653 356 aa11.24□□□□□ -0.61
NECAP1-210ENST00000638237 EVC2Q86UK5 1308 aa11.23□□□□□ -0.61
NECAP1-210ENST00000638237 BCAR3O75815 825 aa11.23□□□□□ -0.61
NECAP1-210ENST00000638237 MTHFSP49914 203 aa11.23□□□□□ -0.61
NECAP1-210ENST00000638237 FAM161AQ3B820 660 aa11.23□□□□□ -0.61
NECAP1-210ENST00000638237 SRPK2P78362 688 aaKnown RBP11.23□□□□□ -0.61
NECAP1-210ENST00000638237 POLR3AO14802 1390 aaPredicted RBP11.22□□□□□ -0.61
NECAP1-210ENST00000638237 SLC52A1Q9NWF4 448 aa11.22□□□□□ -0.61
NECAP1-210ENST00000638237 C8orf34Q49A92 452 aa11.22□□□□□ -0.61
NECAP1-210ENST00000638237 PRAM1Q96QH2 718 aa11.22□□□□□ -0.61
NECAP1-210ENST00000638237 CGNL1Q0VF96 1302 aa11.21□□□□□ -0.61
NECAP1-210ENST00000638237 A0A1W2PP64 1363 aa11.21□□□□□ -0.61
NECAP1-210ENST00000638237 STAG3Q9UJ98 1225 aa11.21□□□□□ -0.61
NECAP1-210ENST00000638237 PTPRMP28827 1452 aa11.21□□□□□ -0.62
NECAP1-210ENST00000638237 NKTRP30414 1462 aaKnown RBP11.21□□□□□ -0.62
NECAP1-210ENST00000638237 USP32Q8NFA0 1604 aa11.21□□□□□ -0.62
NECAP1-210ENST00000638237 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.2□□□□□ -0.62
NECAP1-210ENST00000638237 GGNBP2Q9H3C7 697 aa11.2□□□□□ -0.62
NECAP1-210ENST00000638237 ANKRD36BQ8N2N9 1353 aa11.2□□□□□ -0.62
NECAP1-210ENST00000638237 WWC1Q8IX03 1113 aa11.2□□□□□ -0.62
NECAP1-210ENST00000638237 TRMT2AQ8IZ69 625 aaKnown RBP11.2□□□□□ -0.62
NECAP1-210ENST00000638237 SLC4A3P48751 1232 aa11.19□□□□□ -0.62
NECAP1-210ENST00000638237 YTHDC2Q9H6S0 1430 aaKnown RBP11.19□□□□□ -0.62
NECAP1-210ENST00000638237 TCP11L2Q8N4U5 519 aa11.18□□□□□ -0.62
NECAP1-210ENST00000638237 POGKQ9P215 609 aa11.18□□□□□ -0.62
NECAP1-210ENST00000638237 ALKQ9UM73 1620 aa11.18□□□□□ -0.62
NECAP1-210ENST00000638237 KIF13AQ9H1H9 1805 aa11.18□□□□□ -0.62
NECAP1-210ENST00000638237 E9PSI1 815 aa11.17□□□□□ -0.62
NECAP1-210ENST00000638237 IQSEC2Q5JU85 1478 aa11.17□□□□□ -0.62
NECAP1-210ENST00000638237 ZFYVE9O95405 1425 aa11.17□□□□□ -0.62
NECAP1-210ENST00000638237 EIF5BO60841 1220 aaKnown RBP11.17□□□□□ -0.62
NECAP1-210ENST00000638237 FBLN1P23142 703 aa11.16□□□□□ -0.62
NECAP1-210ENST00000638237 WAPLQ7Z5K2 1190 aa11.16□□□□□ -0.62
NECAP1-210ENST00000638237 FRAT1Q92837 279 aaPredicted RBP11.16□□□□□ -0.62
NECAP1-210ENST00000638237 BCL2L13Q9BXK5 485 aa11.16□□□□□ -0.62
NECAP1-210ENST00000638237 BRPF3Q9ULD4 1205 aa11.16□□□□□ -0.62
NECAP1-210ENST00000638237 U2AF1L5P0DN76 240 aaPredicted RBP11.16□□□□□ -0.62
NECAP1-210ENST00000638237 U2AF1Q01081 240 aaKnown RBP eCLIP11.16□□□□□ -0.62
NECAP1-210ENST00000638237 CD163L1Q9NR16 1453 aa11.16□□□□□ -0.62
NECAP1-210ENST00000638237 RUNDC1Q96C34 613 aa11.15□□□□□ -0.62
NECAP1-210ENST00000638237 ABCC11Q96J66 1382 aa11.15□□□□□ -0.62
NECAP1-210ENST00000638237 SETD1AO15047 1707 aaKnown RBP11.15□□□□□ -0.62
NECAP1-210ENST00000638237 ANKRD26Q9UPS8 1709 aa11.14□□□□□ -0.63
NECAP1-210ENST00000638237 TNNQ9UQP3 1299 aa11.14□□□□□ -0.63
NECAP1-210ENST00000638237 U2SURPO15042 1029 aaKnown RBP11.14□□□□□ -0.63
NECAP1-210ENST00000638237 A2ML1A8K2U0 1454 aa11.14□□□□□ -0.63
NECAP1-210ENST00000638237 FYB1O15117 783 aa11.13□□□□□ -0.63
NECAP1-210ENST00000638237 PANK1Q8TE04 598 aa11.13□□□□□ -0.63
NECAP1-210ENST00000638237 CFAP53Q96M91 514 aa11.13□□□□□ -0.63
NECAP1-210ENST00000638237 CDK19Q9BWU1 502 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 162.2 ms