RNA–Protein interactions for RNA: ENST00000637387.1

CTSD-211, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-211ENST00000637387 TECPR2O15040 1411 aa21.29■■□□□ 1
CTSD-211ENST00000637387 XRN1Q8IZH2 1706 aaKnown RBP21.28■■□□□ 1
CTSD-211ENST00000637387 TBX22Q9Y458 520 aa21.27■■□□□ 1
CTSD-211ENST00000637387 TMEM94Q12767 1356 aa21.27■■□□□ 1
CTSD-211ENST00000637387 TMF1P82094 1093 aa21.27■□□□□ 0.99
CTSD-211ENST00000637387 NKTRP30414 1462 aaKnown RBP21.27■□□□□ 0.99
CTSD-211ENST00000637387 BCANQ96GW7 911 aa21.26■□□□□ 0.99
CTSD-211ENST00000637387 CHD2O14647 1828 aaKnown RBP21.25■□□□□ 0.99
CTSD-211ENST00000637387 ABCC11Q96J66 1382 aa21.24■□□□□ 0.99
CTSD-211ENST00000637387 PROSER2Q86WR7 435 aaPredicted RBP21.24■□□□□ 0.99
CTSD-211ENST00000637387 PTPRUQ92729 1446 aa21.23■□□□□ 0.99
CTSD-211ENST00000637387 POLR3GLQ9BT43 218 aa21.22■□□□□ 0.99
CTSD-211ENST00000637387 STK26Q9P289 416 aa21.21■□□□□ 0.99
CTSD-211ENST00000637387 ILDR2Q71H61 639 aa21.19■□□□□ 0.98
CTSD-211ENST00000637387 PIK3R4Q99570 1358 aa21.19■□□□□ 0.98
CTSD-211ENST00000637387 PLEKHH1Q9ULM0 1364 aa21.19■□□□□ 0.98
CTSD-211ENST00000637387 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.19■□□□□ 0.98
CTSD-211ENST00000637387 FAM135BQ49AJ0 1406 aa21.19■□□□□ 0.98
CTSD-211ENST00000637387 RBM33Q96EV2 1170 aaKnown RBP21.19■□□□□ 0.98
CTSD-211ENST00000637387 ADGRB2O60241 1585 aa21.18■□□□□ 0.98
CTSD-211ENST00000637387 PRAM1Q96QH2 718 aa21.17■□□□□ 0.98
CTSD-211ENST00000637387 SLC24A1O60721 1099 aa21.15■□□□□ 0.98
CTSD-211ENST00000637387 NCOA3Q9Y6Q9 1424 aa21.15■□□□□ 0.98
CTSD-211ENST00000637387 ROBO2Q9HCK4 1378 aa21.15■□□□□ 0.98
CTSD-211ENST00000637387 PTCH1Q13635 1447 aa21.14■□□□□ 0.98
CTSD-211ENST00000637387 CDCA8Q53HL2 280 aa21.14■□□□□ 0.97
CTSD-211ENST00000637387 MSH6P52701 1360 aa21.12■□□□□ 0.97
CTSD-211ENST00000637387 MED1Q15648 1581 aaPredicted RBP21.12■□□□□ 0.97
CTSD-211ENST00000637387 SAFB2Q14151 953 aaKnown RBP eCLIP21.12■□□□□ 0.97
CTSD-211ENST00000637387 SIRT1Q96EB6 747 aa21.11■□□□□ 0.97
CTSD-211ENST00000637387 WAPLQ7Z5K2 1190 aa21.1■□□□□ 0.97
CTSD-211ENST00000637387 ANP32CO43423 234 aa21.1■□□□□ 0.97
CTSD-211ENST00000637387 AMOTL2Q9Y2J4 779 aa21.1■□□□□ 0.97
CTSD-211ENST00000637387 PER1O15534 1290 aaPredicted RBP21.09■□□□□ 0.97
CTSD-211ENST00000637387 POGKQ9P215 609 aa21.09■□□□□ 0.97
CTSD-211ENST00000637387 EVC2Q86UK5 1308 aa21.09■□□□□ 0.97
CTSD-211ENST00000637387 MINK1Q8N4C8 1332 aaPredicted RBP21.09■□□□□ 0.97
CTSD-211ENST00000637387 TOPAZ1Q8N9V7 1692 aa21.08■□□□□ 0.97
CTSD-211ENST00000637387 NALCNQ8IZF0 1738 aa21.08■□□□□ 0.97
CTSD-211ENST00000637387 USP32Q8NFA0 1604 aa21.07■□□□□ 0.96
CTSD-211ENST00000637387 ROBO1Q9Y6N7 1651 aa21.07■□□□□ 0.96
CTSD-211ENST00000637387 PUS7Q96PZ0 661 aaKnown RBP21.07■□□□□ 0.96
CTSD-211ENST00000637387 PRKRIP1Q9H875 184 aaPredicted RBP21.06■□□□□ 0.96
CTSD-211ENST00000637387 SLAIN2Q9P270 581 aa21.06■□□□□ 0.96
CTSD-211ENST00000637387 PANK3Q9H999 370 aa21.06■□□□□ 0.96
CTSD-211ENST00000637387 C19orf44Q9H6X5 657 aa21.04■□□□□ 0.96
CTSD-211ENST00000637387 CD163L1Q9NR16 1453 aa21.03■□□□□ 0.96
CTSD-211ENST00000637387 CABP2Q9NPB3 220 aa21.02■□□□□ 0.96
CTSD-211ENST00000637387 AKAP12Q02952 1782 aa21.02■□□□□ 0.95
CTSD-211ENST00000637387 ATP7BP35670 1465 aa21.01■□□□□ 0.95
CTSD-211ENST00000637387 ATAD2Q6PL18 1390 aa21.01■□□□□ 0.95
CTSD-211ENST00000637387 RGPD8O14715 1765 aaPredicted RBP21.01■□□□□ 0.95
CTSD-211ENST00000637387 FMN2Q9NZ56 1722 aa21.01■□□□□ 0.95
CTSD-211ENST00000637387 SOCS7O14512 581 aa21.01■□□□□ 0.95
CTSD-211ENST00000637387 CCER2I3L3R5 266 aa21■□□□□ 0.95
CTSD-211ENST00000637387 CADPS2Q86UW7 1296 aa21■□□□□ 0.95
CTSD-211ENST00000637387 ITSN1Q15811 1721 aa21■□□□□ 0.95
CTSD-211ENST00000637387 PARD3Q8TEW0 1356 aa21■□□□□ 0.95
CTSD-211ENST00000637387 C14orf37Q86TY3 774 aa20.99■□□□□ 0.95
CTSD-211ENST00000637387 MON2Q7Z3U7 1717 aa20.99■□□□□ 0.95
CTSD-211ENST00000637387 NINLQ9Y2I6 1382 aa20.99■□□□□ 0.95
CTSD-211ENST00000637387 CDK19Q9BWU1 502 aa20.98■□□□□ 0.95
CTSD-211ENST00000637387 ANKRD26Q9UPS8 1709 aa20.98■□□□□ 0.95
CTSD-211ENST00000637387 SLC12A5Q9H2X9 1139 aa20.97■□□□□ 0.95
CTSD-211ENST00000637387 ANKRD36BQ8N2N9 1353 aa20.97■□□□□ 0.95
CTSD-211ENST00000637387 CDC42BPGQ6DT37 1551 aa20.97■□□□□ 0.95
CTSD-211ENST00000637387 DCCP43146 1447 aa20.97■□□□□ 0.95
CTSD-211ENST00000637387 WASLO00401 505 aaPredicted RBP20.97■□□□□ 0.95
CTSD-211ENST00000637387 ATF3P18847 181 aa20.97■□□□□ 0.95
CTSD-211ENST00000637387 SRPK2P78362 688 aaKnown RBP20.97■□□□□ 0.95
CTSD-211ENST00000637387 KIF20BQ96Q89 1820 aa20.96■□□□□ 0.95
CTSD-211ENST00000637387 CARD14Q9BXL6 1004 aa20.96■□□□□ 0.95
CTSD-211ENST00000637387 KTN1Q86UP2 1357 aaKnown RBP20.96■□□□□ 0.95
CTSD-211ENST00000637387 NPC1L1Q9UHC9 1359 aa20.95■□□□□ 0.94
CTSD-211ENST00000637387 AMER1Q5JTC6 1135 aaPredicted RBP20.95■□□□□ 0.94
CTSD-211ENST00000637387 NSD3Q9BZ95 1437 aa20.95■□□□□ 0.94
CTSD-211ENST00000637387 NRKQ7Z2Y5 1582 aa20.94■□□□□ 0.94
CTSD-211ENST00000637387 A0A1W2PP64 1363 aa20.94■□□□□ 0.94
CTSD-211ENST00000637387 PRR36Q9H6K5 1346 aa20.93■□□□□ 0.94
CTSD-211ENST00000637387 PHLPP1O60346 1717 aa20.93■□□□□ 0.94
CTSD-211ENST00000637387 CCDC184Q52MB2 194 aa20.93■□□□□ 0.94
CTSD-211ENST00000637387 TMC1Q8TDI8 760 aa20.92■□□□□ 0.94
CTSD-211ENST00000637387 ADGRL3Q9HAR2 1447 aa20.92■□□□□ 0.94
CTSD-211ENST00000637387 COL16A1Q07092 1604 aaPredicted RBP20.92■□□□□ 0.94
CTSD-211ENST00000637387 PHF23Q9BUL5 403 aaPredicted RBP20.91■□□□□ 0.94
CTSD-211ENST00000637387 PPIP5K1Q6PFW1 1433 aa20.9■□□□□ 0.94
CTSD-211ENST00000637387 AHDC1Q5TGY3 1603 aaPredicted RBP20.9■□□□□ 0.94
CTSD-211ENST00000637387 MST1RQ04912 1400 aa20.9■□□□□ 0.94
CTSD-211ENST00000637387 BRINP3Q76B58 766 aa20.89■□□□□ 0.94
CTSD-211ENST00000637387 RGS17Q9UGC6 210 aaPredicted RBP20.89■□□□□ 0.94
CTSD-211ENST00000637387 KNSTRNQ9Y448 316 aa20.89■□□□□ 0.94
CTSD-211ENST00000637387 JCADQ9P266 1359 aa20.89■□□□□ 0.93
CTSD-211ENST00000637387 CNGB1Q14028 1251 aaPredicted RBP20.89■□□□□ 0.93
CTSD-211ENST00000637387 RALBP1Q15311 655 aa20.89■□□□□ 0.93
CTSD-211ENST00000637387 CPSF1Q10570 1443 aaKnown RBP20.88■□□□□ 0.93
CTSD-211ENST00000637387 CC2D1BQ5T0F9 858 aaKnown RBP20.88■□□□□ 0.93
CTSD-211ENST00000637387 MYBBP1AQ9BQG0 1328 aaKnown RBP20.86■□□□□ 0.93
CTSD-211ENST00000637387 NUDT16Q96DE0 195 aaKnown RBP20.85■□□□□ 0.93
CTSD-211ENST00000637387 CABP1Q9NZU7 370 aa20.85■□□□□ 0.93
CTSD-211ENST00000637387 ANKARQ7Z5J8 1434 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 167.3 ms