RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 KIF3BO15066 747 aa18.92■□□□□ 0.62
CLN6-215ENST00000636674 CFAP70Q5T0N1 1121 aa18.92■□□□□ 0.62
CLN6-215ENST00000636674 LAS1LQ9Y4W2 734 aaKnown RBP18.92■□□□□ 0.62
CLN6-215ENST00000636674 QRICH2Q9H0J4 1663 aa18.91■□□□□ 0.62
CLN6-215ENST00000636674 CCDC146Q8IYE0 955 aa18.91■□□□□ 0.62
CLN6-215ENST00000636674 CARD14Q9BXL6 1004 aa18.91■□□□□ 0.62
CLN6-215ENST00000636674 SPINK5Q9NQ38 1064 aaPredicted RBP18.91■□□□□ 0.62
CLN6-215ENST00000636674 HECW2Q9P2P5 1572 aa18.9■□□□□ 0.62
CLN6-215ENST00000636674 KDM4FA0A1W2PPD8 638 aa18.9■□□□□ 0.62
CLN6-215ENST00000636674 IQSEC2Q5JU85 1478 aa18.89■□□□□ 0.61
CLN6-215ENST00000636674 ADGRB1O14514 1584 aa18.88■□□□□ 0.61
CLN6-215ENST00000636674 YEATS2Q9ULM3 1422 aa18.88■□□□□ 0.61
CLN6-215ENST00000636674 PDE3AQ14432 1141 aa18.88■□□□□ 0.61
CLN6-215ENST00000636674 CGNL1Q0VF96 1302 aa18.87■□□□□ 0.61
CLN6-215ENST00000636674 MLH3Q9UHC1 1453 aa18.86■□□□□ 0.61
CLN6-215ENST00000636674 NOS1P29475 1434 aa18.86■□□□□ 0.61
CLN6-215ENST00000636674 CENPJQ9HC77 1338 aaPredicted RBP18.85■□□□□ 0.61
CLN6-215ENST00000636674 BCAR3O75815 825 aa18.84■□□□□ 0.61
CLN6-215ENST00000636674 NSD3Q9BZ95 1437 aa18.84■□□□□ 0.61
CLN6-215ENST00000636674 SIGLEC1Q9BZZ2 1709 aa18.83■□□□□ 0.61
CLN6-215ENST00000636674 DIP2CQ9Y2E4 1556 aa18.83■□□□□ 0.6
CLN6-215ENST00000636674 ADAMTSL3P82987 1691 aa18.82■□□□□ 0.6
CLN6-215ENST00000636674 WWC1Q8IX03 1113 aa18.82■□□□□ 0.6
CLN6-215ENST00000636674 DMRT2Q9Y5R5 561 aa18.82■□□□□ 0.6
CLN6-215ENST00000636674 AAMPQ13685 434 aa18.81■□□□□ 0.6
CLN6-215ENST00000636674 REREQ9P2R6 1566 aa18.81■□□□□ 0.6
CLN6-215ENST00000636674 NCBP3Q53F19 620 aaKnown RBP18.81■□□□□ 0.6
CLN6-215ENST00000636674 ZMYM3Q14202 1370 aa18.81■□□□□ 0.6
CLN6-215ENST00000636674 NPATQ14207 1427 aa18.8■□□□□ 0.6
CLN6-215ENST00000636674 C14orf93Q9H972 538 aaKnown RBP18.79■□□□□ 0.6
CLN6-215ENST00000636674 MAPK8IP3Q9UPT6 1336 aa18.79■□□□□ 0.6
CLN6-215ENST00000636674 ARHGEF28Q8N1W1 1705 aaKnown RBP18.78■□□□□ 0.6
CLN6-215ENST00000636674 NFKBIBQ15653 356 aa18.78■□□□□ 0.6
CLN6-215ENST00000636674 CLUAP1Q96AJ1 413 aa18.78■□□□□ 0.6
CLN6-215ENST00000636674 PUS7Q96PZ0 661 aaKnown RBP18.78■□□□□ 0.6
CLN6-215ENST00000636674 DAXXQ9UER7 740 aaPredicted RBP18.78■□□□□ 0.6
CLN6-215ENST00000636674 PIK3C2BO00750 1634 aa18.78■□□□□ 0.6
CLN6-215ENST00000636674 ADGRB2O60241 1585 aa18.78■□□□□ 0.6
CLN6-215ENST00000636674 RPGRIP1LQ68CZ1 1315 aa18.78■□□□□ 0.6
CLN6-215ENST00000636674 RGS3P49796 1198 aa18.78■□□□□ 0.6
CLN6-215ENST00000636674 RUNDC1Q96C34 613 aa18.78■□□□□ 0.6
CLN6-215ENST00000636674 NSD2O96028 1365 aa18.76■□□□□ 0.59
CLN6-215ENST00000636674 CCDC27Q2M243 656 aa18.76■□□□□ 0.59
CLN6-215ENST00000636674 CAMSAP1Q5T5Y3 1602 aa18.76■□□□□ 0.59
CLN6-215ENST00000636674 IGHDP01880 384 aa18.76■□□□□ 0.59
CLN6-215ENST00000636674 MORC1Q86VD1 984 aa18.76■□□□□ 0.59
CLN6-215ENST00000636674 WDR63Q8IWG1 891 aa18.76■□□□□ 0.59
CLN6-215ENST00000636674 ABCC3O15438 1527 aa18.76■□□□□ 0.59
CLN6-215ENST00000636674 TULP4Q9NRJ4 1543 aa18.74■□□□□ 0.59
CLN6-215ENST00000636674 AGLP35573 1532 aa18.73■□□□□ 0.59
CLN6-215ENST00000636674 NLRP1Q9C000 1473 aa18.73■□□□□ 0.59
CLN6-215ENST00000636674 USP19O94966 1318 aa18.73■□□□□ 0.59
CLN6-215ENST00000636674 RARSP54136 660 aaKnown RBP18.73■□□□□ 0.59
CLN6-215ENST00000636674 GSE1Q14687 1217 aa18.72■□□□□ 0.59
CLN6-215ENST00000636674 NEXMIFQ5QGS0 1516 aa18.71■□□□□ 0.59
CLN6-215ENST00000636674 SLC4A3P48751 1232 aa18.71■□□□□ 0.59
CLN6-215ENST00000636674 ANKRD36BQ8N2N9 1353 aa18.71■□□□□ 0.59
CLN6-215ENST00000636674 CANXP27824 592 aaKnown RBP18.71■□□□□ 0.59
CLN6-215ENST00000636674 TCP11L2Q8N4U5 519 aa18.71■□□□□ 0.59
CLN6-215ENST00000636674 PMFBP1Q8TBY8 1022 aa18.71■□□□□ 0.59
CLN6-215ENST00000636674 TRAK1Q9UPV9 953 aa18.71■□□□□ 0.59
CLN6-215ENST00000636674 FER1L4A9Z1Z3 1794 aa18.7■□□□□ 0.58
CLN6-215ENST00000636674 PANK1Q8TE04 598 aa18.7■□□□□ 0.58
CLN6-215ENST00000636674 SLC12A5Q9H2X9 1139 aa18.7■□□□□ 0.58
CLN6-215ENST00000636674 COG6Q9Y2V7 657 aa18.7■□□□□ 0.58
CLN6-215ENST00000636674 RIMS1Q86UR5 1692 aaKnown RBP18.69■□□□□ 0.58
CLN6-215ENST00000636674 CFAP65Q6ZU64 1925 aaKnown RBP18.69■□□□□ 0.58
CLN6-215ENST00000636674 CFAP53Q96M91 514 aa18.69■□□□□ 0.58
CLN6-215ENST00000636674 ANKRD26Q9UPS8 1709 aa18.68■□□□□ 0.58
CLN6-215ENST00000636674 PTPRMP28827 1452 aa18.67■□□□□ 0.58
CLN6-215ENST00000636674 MTHFSP49914 203 aa18.66■□□□□ 0.58
CLN6-215ENST00000636674 EVC2Q86UK5 1308 aa18.65■□□□□ 0.58
CLN6-215ENST00000636674 ZFYVE9O95405 1425 aa18.65■□□□□ 0.58
CLN6-215ENST00000636674 CT47B1P0C2W7 299 aaPredicted RBP18.64■□□□□ 0.58
CLN6-215ENST00000636674 CHGAP10645 457 aaKnown RBP18.64■□□□□ 0.58
CLN6-215ENST00000636674 MYH16Q9H6N6 1097 aa18.64■□□□□ 0.58
CLN6-215ENST00000636674 ARHGAP31Q2M1Z3 1444 aa18.64■□□□□ 0.57
CLN6-215ENST00000636674 CLTCQ00610 1675 aaKnown RBP18.64■□□□□ 0.57
CLN6-215ENST00000636674 IL27Q8NEV9 243 aa18.64■□□□□ 0.57
CLN6-215ENST00000636674 MLECQ14165 292 aa18.63■□□□□ 0.57
CLN6-215ENST00000636674 FRAT1Q92837 279 aaPredicted RBP18.63■□□□□ 0.57
CLN6-215ENST00000636674 RRP7AQ9Y3A4 280 aaKnown RBP18.63■□□□□ 0.57
CLN6-215ENST00000636674 MED14O60244 1454 aa18.62■□□□□ 0.57
CLN6-215ENST00000636674 COL3A1P02461 1466 aaPredicted RBP18.62■□□□□ 0.57
CLN6-215ENST00000636674 ABCC11Q96J66 1382 aa18.62■□□□□ 0.57
CLN6-215ENST00000636674 RLBP1P12271 317 aa18.62■□□□□ 0.57
CLN6-215ENST00000636674 TMEM132EQ6IEE7 984 aa18.62■□□□□ 0.57
CLN6-215ENST00000636674 PCDHB15Q9Y5E8 787 aa18.61■□□□□ 0.57
CLN6-215ENST00000636674 TNNT2P45379 298 aaPredicted RBP18.61■□□□□ 0.57
CLN6-215ENST00000636674 BECN1Q14457 450 aa18.61■□□□□ 0.57
CLN6-215ENST00000636674 NEUROD2Q15784 382 aa18.61■□□□□ 0.57
CLN6-215ENST00000636674 VGFO15240 615 aaPredicted RBP18.6■□□□□ 0.57
CLN6-215ENST00000636674 SEC24BO95487 1268 aa18.59■□□□□ 0.57
CLN6-215ENST00000636674 FRAT2O75474 233 aaPredicted RBP18.59■□□□□ 0.57
CLN6-215ENST00000636674 RWDD1Q9H446 243 aaPredicted RBP18.59■□□□□ 0.57
CLN6-215ENST00000636674 MVPQ14764 893 aaKnown RBP18.58■□□□□ 0.56
CLN6-215ENST00000636674 GGT6Q6P531 493 aa18.57■□□□□ 0.56
CLN6-215ENST00000636674 TBC1D32Q96NH3 1257 aa18.57■□□□□ 0.56
CLN6-215ENST00000636674 PDZRN3Q9UPQ7 1066 aa18.57■□□□□ 0.56
CLN6-215ENST00000636674 A0A1W2PP64 1363 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms