RNA–Protein interactions for RNA: ENST00000630543.2

NRXN1-233, Transcript of neurexin 1, humanhuman

TSL 5 BASIC

Gene NRXN1, Length 4,500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-233ENST00000630543 ATAD2Q6PL18 1390 aa17.12■□□□□ 0.33
NRXN1-233ENST00000630543 RRS1Q15050 365 aaKnown RBP17.11■□□□□ 0.33
NRXN1-233ENST00000630543 A0A0G2JS52 829 aa17.11■□□□□ 0.33
NRXN1-233ENST00000630543 TCERG1O14776 1098 aaKnown RBP17.11■□□□□ 0.33
NRXN1-233ENST00000630543 RTF1Q92541 710 aaKnown RBP17.1■□□□□ 0.33
NRXN1-233ENST00000630543 RIMS2Q9UQ26 1411 aa17.1■□□□□ 0.33
NRXN1-233ENST00000630543 IQGAP3Q86VI3 1631 aa17.1■□□□□ 0.33
NRXN1-233ENST00000630543 PTPRTO14522 1441 aa17.1■□□□□ 0.33
NRXN1-233ENST00000630543 PARD3Q8TEW0 1356 aa17.1■□□□□ 0.33
NRXN1-233ENST00000630543 CCDC61Q9Y6R9 512 aa17.09■□□□□ 0.33
NRXN1-233ENST00000630543 KDM5CP41229 1560 aa17.09■□□□□ 0.33
NRXN1-233ENST00000630543 HECW2Q9P2P5 1572 aa17.09■□□□□ 0.33
NRXN1-233ENST00000630543 NME9Q86XW9 330 aa17.09■□□□□ 0.33
NRXN1-233ENST00000630543 AMOTL2Q9Y2J4 779 aa17.09■□□□□ 0.33
NRXN1-233ENST00000630543 TRPM2O94759 1503 aa17.09■□□□□ 0.33
NRXN1-233ENST00000630543 NLRP6P59044 892 aa17.08■□□□□ 0.33
NRXN1-233ENST00000630543 CFAP74Q9C0B2 1584 aa17.08■□□□□ 0.33
NRXN1-233ENST00000630543 NCKAP5LQ9HCH0 1330 aa17.08■□□□□ 0.33
NRXN1-233ENST00000630543 UNC13BO14795 1591 aa17.08■□□□□ 0.32
NRXN1-233ENST00000630543 WASLO00401 505 aaPredicted RBP17.08■□□□□ 0.32
NRXN1-233ENST00000630543 COG6Q9Y2V7 657 aa17.08■□□□□ 0.32
NRXN1-233ENST00000630543 PSME1Q06323 249 aa17.07■□□□□ 0.32
NRXN1-233ENST00000630543 ANKLE2Q86XL3 938 aa17.07■□□□□ 0.32
NRXN1-233ENST00000630543 ITPRIPQ8IWB1 547 aa17.07■□□□□ 0.32
NRXN1-233ENST00000630543 PRKAR2BP31323 418 aa17.07■□□□□ 0.32
NRXN1-233ENST00000630543 SMG6Q86US8 1419 aaKnown RBP17.06■□□□□ 0.32
NRXN1-233ENST00000630543 ARXQ96QS3 562 aa17.06■□□□□ 0.32
NRXN1-233ENST00000630543 ESCO1Q5FWF5 840 aa17.05■□□□□ 0.32
NRXN1-233ENST00000630543 TSR2Q969E8 191 aaKnown RBP17.05■□□□□ 0.32
NRXN1-233ENST00000630543 BCAR3O75815 825 aa17.04■□□□□ 0.32
NRXN1-233ENST00000630543 XPCQ01831 940 aaPredicted RBP17.03■□□□□ 0.32
NRXN1-233ENST00000630543 EMILIN1Q9Y6C2 1016 aa17.03■□□□□ 0.32
NRXN1-233ENST00000630543 ABTB2Q8N961 1025 aa17.02■□□□□ 0.32
NRXN1-233ENST00000630543 CLTCL1P53675 1640 aa17.02■□□□□ 0.32
NRXN1-233ENST00000630543 CSB-PGBD3P0DP91 1061 aa17.02■□□□□ 0.31
NRXN1-233ENST00000630543 ZRANB1Q9UGI0 708 aa17.02■□□□□ 0.31
NRXN1-233ENST00000630543 ASXL1Q8IXJ9 1541 aa17.01■□□□□ 0.31
NRXN1-233ENST00000630543 PANK1Q8TE04 598 aa17.01■□□□□ 0.31
NRXN1-233ENST00000630543 FYB1O15117 783 aa17.01■□□□□ 0.31
NRXN1-233ENST00000630543 PROSER2Q86WR7 435 aaPredicted RBP17.01■□□□□ 0.31
NRXN1-233ENST00000630543 ABCC3O15438 1527 aa17.01■□□□□ 0.31
NRXN1-233ENST00000630543 YTHDC2Q9H6S0 1430 aaKnown RBP17.01■□□□□ 0.31
NRXN1-233ENST00000630543 RIMBP3CA6NJZ7 1639 aa17.01■□□□□ 0.31
NRXN1-233ENST00000630543 RIMBP3BA6NNM3 1639 aa17.01■□□□□ 0.31
NRXN1-233ENST00000630543 RIMBP3Q9UFD9 1639 aa17.01■□□□□ 0.31
NRXN1-233ENST00000630543 CALD1Q05682 793 aaKnown RBP17■□□□□ 0.31
NRXN1-233ENST00000630543 TET3O43151 1660 aa17■□□□□ 0.31
NRXN1-233ENST00000630543 EFCAB6Q5THR3 1501 aa17■□□□□ 0.31
NRXN1-233ENST00000630543 BCORL1Q5H9F3 1711 aa17■□□□□ 0.31
NRXN1-233ENST00000630543 WWC1Q8IX03 1113 aa17■□□□□ 0.31
NRXN1-233ENST00000630543 UPF2Q9HAU5 1272 aaKnown RBP17■□□□□ 0.31
NRXN1-233ENST00000630543 ZNF692Q9BU19 519 aaPredicted RBP16.99■□□□□ 0.31
NRXN1-233ENST00000630543 E9PCH4 1651 aa16.99■□□□□ 0.31
NRXN1-233ENST00000630543 MS4A1P11836 297 aa16.99■□□□□ 0.31
NRXN1-233ENST00000630543 IPO8O15397 1037 aaKnown RBP16.98■□□□□ 0.31
NRXN1-233ENST00000630543 SULT6B1Q6IMI4 303 aa16.98■□□□□ 0.31
NRXN1-233ENST00000630543 MAGI2Q86UL8 1455 aa16.98■□□□□ 0.31
NRXN1-233ENST00000630543 THUMPD2Q9BTF0 503 aaKnown RBP16.97■□□□□ 0.31
NRXN1-233ENST00000630543 ANKRD36BQ8N2N9 1353 aa16.97■□□□□ 0.31
NRXN1-233ENST00000630543 EXOSC9Q06265 439 aaKnown RBP16.97■□□□□ 0.31
NRXN1-233ENST00000630543 APBB1O00213 710 aa16.96■□□□□ 0.31
NRXN1-233ENST00000630543 SLFN5Q08AF3 891 aa16.96■□□□□ 0.31
NRXN1-233ENST00000630543 LMOD3Q0VAK6 560 aa16.96■□□□□ 0.31
NRXN1-233ENST00000630543 C20orf194Q5TEA3 1177 aa16.96■□□□□ 0.31
NRXN1-233ENST00000630543 NGEFQ8N5V2 710 aa16.96■□□□□ 0.31
NRXN1-233ENST00000630543 A0A1W2PP64 1363 aa16.96■□□□□ 0.31
NRXN1-233ENST00000630543 LTKP29376 864 aa16.96■□□□□ 0.31
NRXN1-233ENST00000630543 INO80Q9ULG1 1556 aaPredicted RBP16.96■□□□□ 0.31
NRXN1-233ENST00000630543 PLEKHH1Q9ULM0 1364 aa16.95■□□□□ 0.3
NRXN1-233ENST00000630543 NECTIN2Q92692 538 aa16.94■□□□□ 0.3
NRXN1-233ENST00000630543 ZKSCAN2Q63HK3 967 aa16.94■□□□□ 0.3
NRXN1-233ENST00000630543 ACEP12821 1306 aa16.94■□□□□ 0.3
NRXN1-233ENST00000630543 KIDINS220Q9ULH0 1771 aa16.93■□□□□ 0.3
NRXN1-233ENST00000630543 ATF3P18847 181 aa16.93■□□□□ 0.3
NRXN1-233ENST00000630543 TMPOP42166 694 aaKnown RBP16.93■□□□□ 0.3
NRXN1-233ENST00000630543 SLC4A10Q6U841 1118 aa16.93■□□□□ 0.3
NRXN1-233ENST00000630543 CEP152O94986 1710 aa16.92■□□□□ 0.3
NRXN1-233ENST00000630543 DUSP27Q5VZP5 1158 aa16.92■□□□□ 0.3
NRXN1-233ENST00000630543 SPHKAPQ2M3C7 1700 aa16.92■□□□□ 0.3
NRXN1-233ENST00000630543 RNF17Q9BXT8 1623 aaKnown RBP16.92■□□□□ 0.3
NRXN1-233ENST00000630543 PIK3C2GO75747 1445 aa16.92■□□□□ 0.3
NRXN1-233ENST00000630543 ERVK-7P63135 1459 aa16.92■□□□□ 0.3
NRXN1-233ENST00000630543 TRPM1Q7Z4N2 1603 aa16.91■□□□□ 0.3
NRXN1-233ENST00000630543 MYOM2P54296 1465 aa16.91■□□□□ 0.3
NRXN1-233ENST00000630543 PPIP5K1Q6PFW1 1433 aa16.91■□□□□ 0.3
NRXN1-233ENST00000630543 KIF1BO60333 1816 aa16.9■□□□□ 0.3
NRXN1-233ENST00000630543 DCTN1Q14203 1278 aa16.9■□□□□ 0.3
NRXN1-233ENST00000630543 KCNA6P17658 529 aa16.9■□□□□ 0.3
NRXN1-233ENST00000630543 SKAP1Q86WV1 359 aa16.89■□□□□ 0.3
NRXN1-233ENST00000630543 RTN4Q9NQC3 1192 aaKnown RBP16.89■□□□□ 0.3
NRXN1-233ENST00000630543 FOXO3O43524 673 aa16.89■□□□□ 0.29
NRXN1-233ENST00000630543 RWDD1Q9H446 243 aaPredicted RBP16.89■□□□□ 0.29
NRXN1-233ENST00000630543 LRPPRCP42704 1394 aaKnown RBP16.89■□□□□ 0.29
NRXN1-233ENST00000630543 PPRC1Q5VV67 1664 aaKnown RBP16.89■□□□□ 0.29
NRXN1-233ENST00000630543 METP08581 1390 aa16.89■□□□□ 0.29
NRXN1-233ENST00000630543 DZIP1LQ8IYY4 767 aaKnown RBP16.88■□□□□ 0.29
NRXN1-233ENST00000630543 ABCA6Q8N139 1617 aa16.88■□□□□ 0.29
NRXN1-233ENST00000630543 TMEM2Q9UHN6 1383 aa16.87■□□□□ 0.29
NRXN1-233ENST00000630543 DIP2CQ9Y2E4 1556 aa16.87■□□□□ 0.29
NRXN1-233ENST00000630543 FCHSD2O94868 740 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms