RNA–Protein interactions for RNA: ENST00000630539.1

CLPTM1L-216, Transcript of CLPTM1 like, humanhuman

TSL 5 BASIC

Gene CLPTM1L, Length 2,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1L-216ENST00000630539 SCAF1Q9H7N4 1312 aaKnown RBP22.84■■□□□ 1.25
CLPTM1L-216ENST00000630539 NWD1Q149M9 1564 aa22.83■■□□□ 1.25
CLPTM1L-216ENST00000630539 SBNO2Q9Y2G9 1366 aa22.83■■□□□ 1.25
CLPTM1L-216ENST00000630539 TMF1P82094 1093 aa22.82■■□□□ 1.24
CLPTM1L-216ENST00000630539 CCDC7Q96M83 1385 aa22.82■■□□□ 1.24
CLPTM1L-216ENST00000630539 TULP4Q9NRJ4 1543 aa22.81■■□□□ 1.24
CLPTM1L-216ENST00000630539 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.81■■□□□ 1.24
CLPTM1L-216ENST00000630539 SIRT1Q96EB6 747 aa22.81■■□□□ 1.24
CLPTM1L-216ENST00000630539 ZNF335Q9H4Z2 1342 aaPredicted RBP22.8■■□□□ 1.24
CLPTM1L-216ENST00000630539 DMRT2Q9Y5R5 561 aa22.78■■□□□ 1.24
CLPTM1L-216ENST00000630539 NKTRP30414 1462 aaKnown RBP22.75■■□□□ 1.23
CLPTM1L-216ENST00000630539 DDX10Q13206 875 aaKnown RBP22.75■■□□□ 1.23
CLPTM1L-216ENST00000630539 EVC2Q86UK5 1308 aa22.74■■□□□ 1.23
CLPTM1L-216ENST00000630539 NALCNQ8IZF0 1738 aa22.74■■□□□ 1.23
CLPTM1L-216ENST00000630539 CABP2Q9NPB3 220 aa22.74■■□□□ 1.23
CLPTM1L-216ENST00000630539 PROSER2Q86WR7 435 aaPredicted RBP22.73■■□□□ 1.23
CLPTM1L-216ENST00000630539 SRPK2P78362 688 aaKnown RBP22.72■■□□□ 1.23
CLPTM1L-216ENST00000630539 CENPBP07199 599 aaPredicted RBP22.72■■□□□ 1.23
CLPTM1L-216ENST00000630539 CDK19Q9BWU1 502 aa22.72■■□□□ 1.23
CLPTM1L-216ENST00000630539 ADGRB2O60241 1585 aa22.71■■□□□ 1.23
CLPTM1L-216ENST00000630539 SLC24A1O60721 1099 aa22.71■■□□□ 1.23
CLPTM1L-216ENST00000630539 WASLO00401 505 aaPredicted RBP22.7■■□□□ 1.22
CLPTM1L-216ENST00000630539 TMEM94Q12767 1356 aa22.69■■□□□ 1.22
CLPTM1L-216ENST00000630539 NUTM2FA1L443 756 aa22.69■■□□□ 1.22
CLPTM1L-216ENST00000630539 CDCA8Q53HL2 280 aa22.69■■□□□ 1.22
CLPTM1L-216ENST00000630539 C14orf37Q86TY3 774 aa22.69■■□□□ 1.22
CLPTM1L-216ENST00000630539 MYOM1P52179 1685 aa22.69■■□□□ 1.22
CLPTM1L-216ENST00000630539 ADGRL3Q9HAR2 1447 aa22.67■■□□□ 1.22
CLPTM1L-216ENST00000630539 XIRP1Q702N8 1843 aaKnown RBP22.65■■□□□ 1.22
CLPTM1L-216ENST00000630539 LRRC7Q96NW7 1537 aa22.65■■□□□ 1.22
CLPTM1L-216ENST00000630539 MIER1Q8N108 512 aa22.64■■□□□ 1.22
CLPTM1L-216ENST00000630539 TMC1Q8TDI8 760 aa22.64■■□□□ 1.21
CLPTM1L-216ENST00000630539 CDC42BPGQ6DT37 1551 aa22.63■■□□□ 1.21
CLPTM1L-216ENST00000630539 PRR36Q9H6K5 1346 aa22.62■■□□□ 1.21
CLPTM1L-216ENST00000630539 SLC12A5Q9H2X9 1139 aa22.62■■□□□ 1.21
CLPTM1L-216ENST00000630539 ATP7BP35670 1465 aa22.62■■□□□ 1.21
CLPTM1L-216ENST00000630539 USP32Q8NFA0 1604 aa22.61■■□□□ 1.21
CLPTM1L-216ENST00000630539 FMN2Q9NZ56 1722 aa22.6■■□□□ 1.21
CLPTM1L-216ENST00000630539 ATAD2Q6PL18 1390 aa22.6■■□□□ 1.21
CLPTM1L-216ENST00000630539 RGPD8O14715 1765 aaPredicted RBP22.6■■□□□ 1.21
CLPTM1L-216ENST00000630539 NUDT16Q96DE0 195 aaKnown RBP22.6■■□□□ 1.21
CLPTM1L-216ENST00000630539 PUS7Q96PZ0 661 aaKnown RBP22.58■■□□□ 1.21
CLPTM1L-216ENST00000630539 LTBP4Q8N2S1 1624 aa22.58■■□□□ 1.21
CLPTM1L-216ENST00000630539 C19orf44Q9H6X5 657 aa22.58■■□□□ 1.2
CLPTM1L-216ENST00000630539 CABP1Q9NZU7 370 aa22.58■■□□□ 1.2
CLPTM1L-216ENST00000630539 PANK3Q9H999 370 aa22.57■■□□□ 1.2
CLPTM1L-216ENST00000630539 PPIP5K1Q6PFW1 1433 aa22.57■■□□□ 1.2
CLPTM1L-216ENST00000630539 NCOA3Q9Y6Q9 1424 aa22.56■■□□□ 1.2
CLPTM1L-216ENST00000630539 TOPAZ1Q8N9V7 1692 aa22.55■■□□□ 1.2
CLPTM1L-216ENST00000630539 CCDC61Q9Y6R9 512 aa22.55■■□□□ 1.2
CLPTM1L-216ENST00000630539 MSH6P52701 1360 aa22.54■■□□□ 1.2
CLPTM1L-216ENST00000630539 CD163L1Q9NR16 1453 aa22.53■■□□□ 1.2
CLPTM1L-216ENST00000630539 ATF3P18847 181 aa22.52■■□□□ 1.19
CLPTM1L-216ENST00000630539 CNGB1Q14028 1251 aaPredicted RBP22.52■■□□□ 1.19
CLPTM1L-216ENST00000630539 A0A1W2PP64 1363 aa22.51■■□□□ 1.19
CLPTM1L-216ENST00000630539 ITSN1Q15811 1721 aa22.51■■□□□ 1.19
CLPTM1L-216ENST00000630539 PMFBP1Q8TBY8 1022 aa22.51■■□□□ 1.19
CLPTM1L-216ENST00000630539 NINLQ9Y2I6 1382 aa22.51■■□□□ 1.19
CLPTM1L-216ENST00000630539 DCCP43146 1447 aa22.51■■□□□ 1.19
CLPTM1L-216ENST00000630539 ANKARQ7Z5J8 1434 aa22.51■■□□□ 1.19
CLPTM1L-216ENST00000630539 CARD14Q9BXL6 1004 aa22.5■■□□□ 1.19
CLPTM1L-216ENST00000630539 ANKRD36BQ8N2N9 1353 aa22.5■■□□□ 1.19
CLPTM1L-216ENST00000630539 PER1O15534 1290 aaPredicted RBP22.48■■□□□ 1.19
CLPTM1L-216ENST00000630539 MST1RQ04912 1400 aa22.48■■□□□ 1.19
CLPTM1L-216ENST00000630539 CADPS2Q86UW7 1296 aa22.48■■□□□ 1.19
CLPTM1L-216ENST00000630539 ESCO1Q5FWF5 840 aa22.47■■□□□ 1.19
CLPTM1L-216ENST00000630539 ORAI2Q96SN7 254 aa22.47■■□□□ 1.19
CLPTM1L-216ENST00000630539 C1orf167Q5SNV9 1468 aa22.47■■□□□ 1.19
CLPTM1L-216ENST00000630539 NSD3Q9BZ95 1437 aa22.46■■□□□ 1.19
CLPTM1L-216ENST00000630539 ACEP12821 1306 aa22.45■■□□□ 1.18
CLPTM1L-216ENST00000630539 TERF2IPQ9NYB0 399 aa22.45■■□□□ 1.18
CLPTM1L-216ENST00000630539 GTF3C3Q9Y5Q9 886 aa22.45■■□□□ 1.18
CLPTM1L-216ENST00000630539 CPSF1Q10570 1443 aaKnown RBP22.44■■□□□ 1.18
CLPTM1L-216ENST00000630539 PLEKHG3A1L390 1219 aa22.43■■□□□ 1.18
CLPTM1L-216ENST00000630539 HDGFL2Q7Z4V5 671 aaPredicted RBP22.43■■□□□ 1.18
CLPTM1L-216ENST00000630539 KNSTRNQ9Y448 316 aa22.43■■□□□ 1.18
CLPTM1L-216ENST00000630539 AKAP12Q02952 1782 aa22.43■■□□□ 1.18
CLPTM1L-216ENST00000630539 KTN1Q86UP2 1357 aaKnown RBP22.43■■□□□ 1.18
CLPTM1L-216ENST00000630539 PHF8Q9UPP1 1060 aa22.42■■□□□ 1.18
CLPTM1L-216ENST00000630539 NGDNQ8NEJ9 315 aaKnown RBP22.41■■□□□ 1.18
CLPTM1L-216ENST00000630539 MON2Q7Z3U7 1717 aa22.41■■□□□ 1.18
CLPTM1L-216ENST00000630539 CC2D1BQ5T0F9 858 aaKnown RBP22.4■■□□□ 1.18
CLPTM1L-216ENST00000630539 POLR3AO14802 1390 aaPredicted RBP22.4■■□□□ 1.18
CLPTM1L-216ENST00000630539 YTHDC1Q96MU7 727 aaKnown RBP22.39■■□□□ 1.17
CLPTM1L-216ENST00000630539 SLAIN2Q9P270 581 aa22.39■■□□□ 1.17
CLPTM1L-216ENST00000630539 AMER1Q5JTC6 1135 aaPredicted RBP22.38■■□□□ 1.17
CLPTM1L-216ENST00000630539 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.38■■□□□ 1.17
CLPTM1L-216ENST00000630539 FOXO3O43524 673 aa22.38■■□□□ 1.17
CLPTM1L-216ENST00000630539 USP6P35125 1406 aa22.37■■□□□ 1.17
CLPTM1L-216ENST00000630539 NRKQ7Z2Y5 1582 aa22.37■■□□□ 1.17
CLPTM1L-216ENST00000630539 ANP32CO43423 234 aa22.36■■□□□ 1.17
CLPTM1L-216ENST00000630539 DDX17Q92841 729 aaKnown RBP22.36■■□□□ 1.17
CLPTM1L-216ENST00000630539 XPCQ01831 940 aaPredicted RBP22.36■■□□□ 1.17
CLPTM1L-216ENST00000630539 ZNF692Q9BU19 519 aaPredicted RBP22.35■■□□□ 1.17
CLPTM1L-216ENST00000630539 KIF1AQ12756 1690 aa22.35■■□□□ 1.17
CLPTM1L-216ENST00000630539 EDC4Q6P2E9 1401 aaKnown RBP22.35■■□□□ 1.17
CLPTM1L-216ENST00000630539 BRINP3Q76B58 766 aa22.35■■□□□ 1.17
CLPTM1L-216ENST00000630539 PRKRIP1Q9H875 184 aaPredicted RBP22.34■■□□□ 1.17
CLPTM1L-216ENST00000630539 CGNL1Q0VF96 1302 aa22.34■■□□□ 1.17
CLPTM1L-216ENST00000630539 PSME1Q06323 249 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms