RNA–Protein interactions for RNA: ENST00000628742.2

SOX9-AS1-218, SOX9 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene SOX9-AS1, Length 733 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-218ENST00000628742 SPHKAPQ2M3C7 1700 aa10.53□□□□□ -0.72
SOX9-AS1-218ENST00000628742 RBM6P78332 1123 aaKnown RBP10.53□□□□□ -0.72
SOX9-AS1-218ENST00000628742 RBM42Q9BTD8 480 aaKnown RBP10.53□□□□□ -0.72
SOX9-AS1-218ENST00000628742 FNBP4Q8N3X1 1017 aaPredicted RBP10.52□□□□□ -0.73
SOX9-AS1-218ENST00000628742 C1orf167Q5SNV9 1468 aa10.52□□□□□ -0.73
SOX9-AS1-218ENST00000628742 MYOM2P54296 1465 aa10.51□□□□□ -0.73
SOX9-AS1-218ENST00000628742 TRIM52Q96A61 297 aa10.51□□□□□ -0.73
SOX9-AS1-218ENST00000628742 NUP155O75694 1391 aa10.51□□□□□ -0.73
SOX9-AS1-218ENST00000628742 ATRNO75882 1429 aa10.5□□□□□ -0.73
SOX9-AS1-218ENST00000628742 MEX3CQ5U5Q3 659 aaKnown RBP10.5□□□□□ -0.73
SOX9-AS1-218ENST00000628742 BCANQ96GW7 911 aa10.5□□□□□ -0.73
SOX9-AS1-218ENST00000628742 CLTCL1P53675 1640 aa10.49□□□□□ -0.73
SOX9-AS1-218ENST00000628742 C14orf37Q86TY3 774 aa10.48□□□□□ -0.73
SOX9-AS1-218ENST00000628742 QTRT2Q9H974 415 aaKnown RBP10.48□□□□□ -0.73
SOX9-AS1-218ENST00000628742 ATAD2Q6PL18 1390 aa10.48□□□□□ -0.73
SOX9-AS1-218ENST00000628742 ROBO2Q9HCK4 1378 aa10.48□□□□□ -0.73
SOX9-AS1-218ENST00000628742 BCL9LQ86UU0 1499 aa10.48□□□□□ -0.73
SOX9-AS1-218ENST00000628742 CDC42BPGQ6DT37 1551 aa10.48□□□□□ -0.73
SOX9-AS1-218ENST00000628742 FAM50AQ14320 339 aaKnown RBP10.47□□□□□ -0.73
SOX9-AS1-218ENST00000628742 NUTM2DQ5VT03 806 aaPredicted RBP10.47□□□□□ -0.73
SOX9-AS1-218ENST00000628742 HFM1A2PYH4 1435 aa10.47□□□□□ -0.73
SOX9-AS1-218ENST00000628742 TECPR2O15040 1411 aa10.47□□□□□ -0.73
SOX9-AS1-218ENST00000628742 PXDNQ92626 1479 aa10.47□□□□□ -0.73
SOX9-AS1-218ENST00000628742 MKRN4PQ13434 485 aaPredicted RBP10.46□□□□□ -0.73
SOX9-AS1-218ENST00000628742 NGLY1Q96IV0 654 aa10.46□□□□□ -0.73
SOX9-AS1-218ENST00000628742 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.46□□□□□ -0.74
SOX9-AS1-218ENST00000628742 POTEHQ6S545 545 aa10.45□□□□□ -0.74
SOX9-AS1-218ENST00000628742 CCDC125Q86Z20 511 aa10.45□□□□□ -0.74
SOX9-AS1-218ENST00000628742 NUTM2BA6NNL0 878 aaPredicted RBP10.44□□□□□ -0.74
SOX9-AS1-218ENST00000628742 NUTM2EB1AL46 878 aaPredicted RBP10.44□□□□□ -0.74
SOX9-AS1-218ENST00000628742 NUTM2AQ8IVF1 878 aaPredicted RBP10.44□□□□□ -0.74
SOX9-AS1-218ENST00000628742 MARF1Q9Y4F3 1742 aaKnown RBP10.44□□□□□ -0.74
SOX9-AS1-218ENST00000628742 RPGRIP1LQ68CZ1 1315 aa10.43□□□□□ -0.74
SOX9-AS1-218ENST00000628742 CHGAP10645 457 aaKnown RBP10.43□□□□□ -0.74
SOX9-AS1-218ENST00000628742 DDX17Q92841 729 aaKnown RBP10.43□□□□□ -0.74
SOX9-AS1-218ENST00000628742 C8orf37Q96NL8 207 aa10.43□□□□□ -0.74
SOX9-AS1-218ENST00000628742 TRPC5Q9UL62 973 aaPredicted RBP10.43□□□□□ -0.74
SOX9-AS1-218ENST00000628742 SLIT2O94813 1529 aa10.43□□□□□ -0.74
SOX9-AS1-218ENST00000628742 KIF1BO60333 1816 aa10.42□□□□□ -0.74
SOX9-AS1-218ENST00000628742 NAIPQ13075 1403 aa10.41□□□□□ -0.74
SOX9-AS1-218ENST00000628742 ORAI2Q96SN7 254 aa10.41□□□□□ -0.74
SOX9-AS1-218ENST00000628742 PPLO60437 1756 aa10.41□□□□□ -0.74
SOX9-AS1-218ENST00000628742 RRBP1Q9P2E9 1410 aaKnown RBP10.41□□□□□ -0.74
SOX9-AS1-218ENST00000628742 VGFO15240 615 aaPredicted RBP10.4□□□□□ -0.74
SOX9-AS1-218ENST00000628742 USP21Q9UK80 565 aa10.4□□□□□ -0.74
SOX9-AS1-218ENST00000628742 GLI3P10071 1580 aa10.39□□□□□ -0.75
SOX9-AS1-218ENST00000628742 NPHP3Q7Z494 1330 aa10.39□□□□□ -0.75
SOX9-AS1-218ENST00000628742 ONECUT3O60422 494 aaPredicted RBP10.39□□□□□ -0.75
SOX9-AS1-218ENST00000628742 LRP5O75197 1615 aa10.39□□□□□ -0.75
SOX9-AS1-218ENST00000628742 KNDC1Q76NI1 1749 aa10.38□□□□□ -0.75
SOX9-AS1-218ENST00000628742 BLMP54132 1417 aaPredicted RBP10.38□□□□□ -0.75
SOX9-AS1-218ENST00000628742 SPATA31E1Q6ZUB1 1445 aa10.38□□□□□ -0.75
SOX9-AS1-218ENST00000628742 ABCC11Q96J66 1382 aa10.38□□□□□ -0.75
SOX9-AS1-218ENST00000628742 ADAMTS2O95450 1211 aa10.37□□□□□ -0.75
SOX9-AS1-218ENST00000628742 GJD4Q96KN9 370 aaPredicted RBP10.37□□□□□ -0.75
SOX9-AS1-218ENST00000628742 RALGAPBQ86X10 1494 aa10.36□□□□□ -0.75
SOX9-AS1-218ENST00000628742 IFT172Q9UG01 1749 aa10.36□□□□□ -0.75
SOX9-AS1-218ENST00000628742 SIRT1Q96EB6 747 aa10.36□□□□□ -0.75
SOX9-AS1-218ENST00000628742 ZRANB1Q9UGI0 708 aa10.36□□□□□ -0.75
SOX9-AS1-218ENST00000628742 LRPPRCP42704 1394 aaKnown RBP10.36□□□□□ -0.75
SOX9-AS1-218ENST00000628742 USP32Q8NFA0 1604 aa10.36□□□□□ -0.75
SOX9-AS1-218ENST00000628742 FMN2Q9NZ56 1722 aa10.36□□□□□ -0.75
SOX9-AS1-218ENST00000628742 KIF1AQ12756 1690 aa10.35□□□□□ -0.75
SOX9-AS1-218ENST00000628742 ZNF326Q5BKZ1 582 aaKnown RBP10.35□□□□□ -0.75
SOX9-AS1-218ENST00000628742 NWD2Q9ULI1 1742 aa10.35□□□□□ -0.75
SOX9-AS1-218ENST00000628742 NRXN1Q9ULB1 1477 aa10.35□□□□□ -0.75
SOX9-AS1-218ENST00000628742 SPATA31A3Q5VYP0 1347 aa10.34□□□□□ -0.75
SOX9-AS1-218ENST00000628742 CCDC144AA2RUR9 1427 aa10.34□□□□□ -0.75
SOX9-AS1-218ENST00000628742 PIK3C2GO75747 1445 aa10.34□□□□□ -0.75
SOX9-AS1-218ENST00000628742 AKT1S1Q96B36 256 aa10.34□□□□□ -0.75
SOX9-AS1-218ENST00000628742 SPDYE2BA6NHP3 402 aa10.33□□□□□ -0.76
SOX9-AS1-218ENST00000628742 SPDYE6P0CI01 402 aa10.33□□□□□ -0.76
SOX9-AS1-218ENST00000628742 SPDYE2Q495Y8 402 aa10.33□□□□□ -0.76
SOX9-AS1-218ENST00000628742 UNC5CLQ8IV45 518 aa10.33□□□□□ -0.76
SOX9-AS1-218ENST00000628742 ANKRD30BQ9BXX2 1392 aa10.32□□□□□ -0.76
SOX9-AS1-218ENST00000628742 BRWD3Q6RI45 1802 aa10.32□□□□□ -0.76
SOX9-AS1-218ENST00000628742 ABCA3Q99758 1704 aa10.32□□□□□ -0.76
SOX9-AS1-218ENST00000628742 DISP2A7MBM2 1401 aa10.32□□□□□ -0.76
SOX9-AS1-218ENST00000628742 SBNO1A3KN83 1393 aa10.31□□□□□ -0.76
SOX9-AS1-218ENST00000628742 VPS72Q15906 364 aa10.31□□□□□ -0.76
SOX9-AS1-218ENST00000628742 FOXO3O43524 673 aa10.3□□□□□ -0.76
SOX9-AS1-218ENST00000628742 ESCO1Q5FWF5 840 aa10.3□□□□□ -0.76
SOX9-AS1-218ENST00000628742 TNS3Q68CZ2 1445 aa10.3□□□□□ -0.76
SOX9-AS1-218ENST00000628742 ADGRB2O60241 1585 aa10.3□□□□□ -0.76
SOX9-AS1-218ENST00000628742 ADGRF5Q8IZF2 1346 aa10.3□□□□□ -0.76
SOX9-AS1-218ENST00000628742 YTHDC2Q9H6S0 1430 aaKnown RBP10.29□□□□□ -0.76
SOX9-AS1-218ENST00000628742 NRAPQ86VF7 1730 aa10.29□□□□□ -0.76
SOX9-AS1-218ENST00000628742 PLCH1Q4KWH8 1693 aa10.28□□□□□ -0.76
SOX9-AS1-218ENST00000628742 PLEKHH1Q9ULM0 1364 aa10.28□□□□□ -0.76
SOX9-AS1-218ENST00000628742 DLC1Q96QB1 1528 aa10.28□□□□□ -0.76
SOX9-AS1-218ENST00000628742 ANKARQ7Z5J8 1434 aa10.27□□□□□ -0.77
SOX9-AS1-218ENST00000628742 TRPM3Q9HCF6 1732 aaPredicted RBP10.27□□□□□ -0.77
SOX9-AS1-218ENST00000628742 ARHGEF10O15013 1369 aa10.26□□□□□ -0.77
SOX9-AS1-218ENST00000628742 ALS2Q96Q42 1657 aa10.26□□□□□ -0.77
SOX9-AS1-218ENST00000628742 THSD7AQ9UPZ6 1657 aa10.26□□□□□ -0.77
SOX9-AS1-218ENST00000628742 WAPLQ7Z5K2 1190 aa10.26□□□□□ -0.77
SOX9-AS1-218ENST00000628742 CRYBG1Q9Y4K1 1723 aa10.26□□□□□ -0.77
SOX9-AS1-218ENST00000628742 SEPT12Q8IYM1 358 aa10.25□□□□□ -0.77
SOX9-AS1-218ENST00000628742 C14orf93Q9H972 538 aaKnown RBP10.25□□□□□ -0.77
SOX9-AS1-218ENST00000628742 ADGRB1O14514 1584 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms