RNA–Protein interactions for RNA: ENST00000627328.2

PTP4A2-220, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5 BASIC

Gene PTP4A2, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-220ENST00000627328 PUS10Q3MIT2 529 aaKnown RBP8.48□□□□□ -1.05
PTP4A2-220ENST00000627328 KCNV2Q8TDN2 545 aa8.48□□□□□ -1.05
PTP4A2-220ENST00000627328 RCCD1A6NED2 376 aa8.47□□□□□ -1.05
PTP4A2-220ENST00000627328 RNF225M0QZC1 329 aaPredicted RBP8.46□□□□□ -1.06
PTP4A2-220ENST00000627328 HAP1P54257 671 aaPredicted RBP8.46□□□□□ -1.06
PTP4A2-220ENST00000627328 RASSF7Q02833 373 aa8.45□□□□□ -1.06
PTP4A2-220ENST00000627328 FMNL1O95466 1100 aaPredicted RBP8.44□□□□□ -1.06
PTP4A2-220ENST00000627328 TRIM32Q13049 653 aa8.44□□□□□ -1.06
PTP4A2-220ENST00000627328 XP32Q5T750 250 aa8.44□□□□□ -1.06
PTP4A2-220ENST00000627328 ADGRG1Q9Y653 693 aa8.44□□□□□ -1.06
PTP4A2-220ENST00000627328 FAM160A2Q8N612 972 aaPredicted RBP8.43□□□□□ -1.06
PTP4A2-220ENST00000627328 THAP11Q96EK4 314 aa8.43□□□□□ -1.06
PTP4A2-220ENST00000627328 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.42□□□□□ -1.06
PTP4A2-220ENST00000627328 IGHA1P01876 353 aa8.42□□□□□ -1.06
PTP4A2-220ENST00000627328 VSIG10Q8N0Z9 540 aa8.41□□□□□ -1.06
PTP4A2-220ENST00000627328 VSIG8P0DPA2 414 aa8.4□□□□□ -1.06
PTP4A2-220ENST00000627328 MORN1Q5T089 497 aa8.4□□□□□ -1.06
PTP4A2-220ENST00000627328 SALL2Q9Y467 1007 aaPredicted RBP8.4□□□□□ -1.06
PTP4A2-220ENST00000627328 MSS51Q4VC12 460 aa8.38□□□□□ -1.07
PTP4A2-220ENST00000627328 TRIM46Q7Z4K8 759 aa8.38□□□□□ -1.07
PTP4A2-220ENST00000627328 BMP1P13497 986 aa8.37□□□□□ -1.07
PTP4A2-220ENST00000627328 PRDM9Q9NQV7 894 aa8.37□□□□□ -1.07
PTP4A2-220ENST00000627328 KRTAP4-8Q9BYQ9 185 aa8.36□□□□□ -1.07
PTP4A2-220ENST00000627328 CAPN5O15484 640 aaPredicted RBP8.35□□□□□ -1.07
PTP4A2-220ENST00000627328 ATP6V1AP38606 617 aa8.35□□□□□ -1.07
PTP4A2-220ENST00000627328 SMYD5Q6GMV2 418 aa8.35□□□□□ -1.07
PTP4A2-220ENST00000627328 KDM2AQ9Y2K7 1162 aa8.35□□□□□ -1.07
PTP4A2-220ENST00000627328 ALDH1A1P00352 501 aa8.34□□□□□ -1.07
PTP4A2-220ENST00000627328 MLLT3P42568 568 aaPredicted RBP8.34□□□□□ -1.07
PTP4A2-220ENST00000627328 PTGDRQ13258 359 aa8.34□□□□□ -1.07
PTP4A2-220ENST00000627328 RC3H1Q5TC82 1133 aaKnown RBP8.34□□□□□ -1.07
PTP4A2-220ENST00000627328 GPAT2Q6NUI2 795 aa8.34□□□□□ -1.07
PTP4A2-220ENST00000627328 DNMT3AQ9Y6K1 912 aaPredicted RBP8.34□□□□□ -1.07
PTP4A2-220ENST00000627328 FECHP22830 423 aa8.33□□□□□ -1.08
PTP4A2-220ENST00000627328 WNT7BP56706 349 aa8.33□□□□□ -1.08
PTP4A2-220ENST00000627328 FOXK2Q01167 660 aa8.33□□□□□ -1.08
PTP4A2-220ENST00000627328 BRICD5Q6PL45 260 aa8.33□□□□□ -1.08
PTP4A2-220ENST00000627328 SLC27A5Q9Y2P5 690 aa8.33□□□□□ -1.08
PTP4A2-220ENST00000627328 SEMA3EO15041 775 aa8.32□□□□□ -1.08
PTP4A2-220ENST00000627328 TESPA1A2RU30 521 aaPredicted RBP8.31□□□□□ -1.08
PTP4A2-220ENST00000627328 FUT2Q10981 343 aa8.31□□□□□ -1.08
PTP4A2-220ENST00000627328 ZFP42Q96MM3 310 aa8.3□□□□□ -1.08
PTP4A2-220ENST00000627328 ADAMTS8Q9UP79 889 aa8.3□□□□□ -1.08
PTP4A2-220ENST00000627328 OATP04181 439 aa8.29□□□□□ -1.08
PTP4A2-220ENST00000627328 FAM161AQ3B820 660 aa8.29□□□□□ -1.08
PTP4A2-220ENST00000627328 MMP16P51512 607 aa8.28□□□□□ -1.08
PTP4A2-220ENST00000627328 WASF2Q9Y6W5 498 aa8.28□□□□□ -1.08
PTP4A2-220ENST00000627328 RDH13Q8NBN7 331 aa8.27□□□□□ -1.09
PTP4A2-220ENST00000627328 PXYLP1Q8TE99 480 aa8.26□□□□□ -1.09
PTP4A2-220ENST00000627328 NUTM2FA1L443 756 aa8.25□□□□□ -1.09
PTP4A2-220ENST00000627328 FCHSD2O94868 740 aa8.25□□□□□ -1.09
PTP4A2-220ENST00000627328 SKOR1P84550 965 aa8.25□□□□□ -1.09
PTP4A2-220ENST00000627328 SCARF1Q14162 830 aa8.25□□□□□ -1.09
PTP4A2-220ENST00000627328 TULP1O00294 542 aaPredicted RBP8.24□□□□□ -1.09
PTP4A2-220ENST00000627328 GRIPAP1Q4V328 841 aa8.24□□□□□ -1.09
PTP4A2-220ENST00000627328 Q3C1V9 767 aa8.23□□□□□ -1.09
PTP4A2-220ENST00000627328 KANK3Q6NY19 840 aa8.23□□□□□ -1.09
PTP4A2-220ENST00000627328 RNF19BQ6ZMZ0 732 aa8.23□□□□□ -1.09
PTP4A2-220ENST00000627328 PSMG3-AS1Q96PY0 264 aa8.23□□□□□ -1.09
PTP4A2-220ENST00000627328 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.21□□□□□ -1.1
PTP4A2-220ENST00000627328 SIAH2O43255 324 aa8.21□□□□□ -1.1
PTP4A2-220ENST00000627328 HIC1Q14526 733 aa8.21□□□□□ -1.1
PTP4A2-220ENST00000627328 DAXXQ9UER7 740 aaPredicted RBP8.21□□□□□ -1.1
PTP4A2-220ENST00000627328 ADAM23O75077 832 aa8.2□□□□□ -1.1
PTP4A2-220ENST00000627328 DXOO77932 396 aaKnown RBP8.2□□□□□ -1.1
PTP4A2-220ENST00000627328 IRS1P35568 1242 aa8.2□□□□□ -1.1
PTP4A2-220ENST00000627328 GCGRP47871 477 aa8.2□□□□□ -1.1
PTP4A2-220ENST00000627328 MRPL14Q6P1L8 145 aaKnown RBP8.2□□□□□ -1.1
PTP4A2-220ENST00000627328 CCDC24Q8N4L8 307 aa8.2□□□□□ -1.1
PTP4A2-220ENST00000627328 EHBP1Q8NDI1 1231 aa8.2□□□□□ -1.1
PTP4A2-220ENST00000627328 KRTAP9-2Q9BYQ4 174 aa8.2□□□□□ -1.1
PTP4A2-220ENST00000627328 RBM26Q5T8P6 1007 aaKnown RBP8.19□□□□□ -1.1
PTP4A2-220ENST00000627328 METTL3Q86U44 580 aaKnown RBP8.18□□□□□ -1.1
PTP4A2-220ENST00000627328 DDX11L8A8MPP1 907 aa8.17□□□□□ -1.1
PTP4A2-220ENST00000627328 PPFIA3O75145 1194 aa8.17□□□□□ -1.1
PTP4A2-220ENST00000627328 SULF1Q8IWU6 871 aa8.17□□□□□ -1.1
PTP4A2-220ENST00000627328 PURBQ96QR8 312 aaKnown RBP8.17□□□□□ -1.1
PTP4A2-220ENST00000627328 USB1Q9BQ65 265 aaKnown RBP8.16□□□□□ -1.1
PTP4A2-220ENST00000627328 KRTAP9-6A0A140TA67 174 aa8.15□□□□□ -1.1
PTP4A2-220ENST00000627328 SOBPA7XYQ1 873 aa8.15□□□□□ -1.1
PTP4A2-220ENST00000627328 GNPATO15228 680 aa8.15□□□□□ -1.1
PTP4A2-220ENST00000627328 MAN1A2O60476 641 aa8.15□□□□□ -1.1
PTP4A2-220ENST00000627328 SVOPQ8N4V2 548 aa8.15□□□□□ -1.1
PTP4A2-220ENST00000627328 MARSP56192 900 aaKnown RBP8.14□□□□□ -1.11
PTP4A2-220ENST00000627328 GPIHBP1Q8IV16 184 aa8.14□□□□□ -1.11
PTP4A2-220ENST00000627328 SCARF2Q96GP6 870 aaPredicted RBP8.14□□□□□ -1.11
PTP4A2-220ENST00000627328 CNTNAP3BQ96NU0 1288 aa8.14□□□□□ -1.11
PTP4A2-220ENST00000627328 CNTNAP3Q9BZ76 1288 aa8.14□□□□□ -1.11
PTP4A2-220ENST00000627328 MSTNO14793 375 aa8.13□□□□□ -1.11
PTP4A2-220ENST00000627328 GPR37O15354 613 aa8.12□□□□□ -1.11
PTP4A2-220ENST00000627328 ZNF385CQ66K41 422 aaPredicted RBP8.12□□□□□ -1.11
PTP4A2-220ENST00000627328 KRT76Q01546 638 aa8.11□□□□□ -1.11
PTP4A2-220ENST00000627328 KRTAP1-3Q8IUG1 177 aa8.11□□□□□ -1.11
PTP4A2-220ENST00000627328 PLEKHG3A1L390 1219 aa8.1□□□□□ -1.11
PTP4A2-220ENST00000627328 ADH1CP00326 375 aa8.09□□□□□ -1.11
PTP4A2-220ENST00000627328 NNTQ13423 1086 aa8.08□□□□□ -1.12
PTP4A2-220ENST00000627328 ARHGEF15O94989 841 aa8.07□□□□□ -1.12
PTP4A2-220ENST00000627328 TIMP2P16035 220 aa8.06□□□□□ -1.12
PTP4A2-220ENST00000627328 WDR4P57081 412 aaKnown RBP8.06□□□□□ -1.12
PTP4A2-220ENST00000627328 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms