RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 IRX6P78412 446 aaPredicted RBP15.91■□□□□ 0.14
LINC00538-201ENST00000626109 FOXD4L5Q5VV16 416 aaPredicted RBP15.91■□□□□ 0.14
LINC00538-201ENST00000626109 FOXD4L4Q8WXT5 416 aaPredicted RBP15.91■□□□□ 0.14
LINC00538-201ENST00000626109 EID1Q9Y6B2 187 aa15.91■□□□□ 0.14
LINC00538-201ENST00000626109 VGFO15240 615 aaPredicted RBP15.9■□□□□ 0.14
LINC00538-201ENST00000626109 NUTM2DQ5VT03 806 aaPredicted RBP15.88■□□□□ 0.13
LINC00538-201ENST00000626109 TXNDC2Q86VQ3 553 aa15.88■□□□□ 0.13
LINC00538-201ENST00000626109 SCAF11Q99590 1463 aaKnown RBP15.88■□□□□ 0.13
LINC00538-201ENST00000626109 ANKLE2Q86XL3 938 aa15.88■□□□□ 0.13
LINC00538-201ENST00000626109 CCDC136Q96JN2 1154 aa15.88■□□□□ 0.13
LINC00538-201ENST00000626109 HSPA2P54652 639 aa15.87■□□□□ 0.13
LINC00538-201ENST00000626109 ADGRF5Q8IZF2 1346 aa15.86■□□□□ 0.13
LINC00538-201ENST00000626109 LTKP29376 864 aa15.86■□□□□ 0.13
LINC00538-201ENST00000626109 ZNF692Q9BU19 519 aaPredicted RBP15.85■□□□□ 0.13
LINC00538-201ENST00000626109 BRPF3Q9ULD4 1205 aa15.85■□□□□ 0.13
LINC00538-201ENST00000626109 NRXN1Q9ULB1 1477 aa15.85■□□□□ 0.13
LINC00538-201ENST00000626109 PRAG1Q86YV5 1406 aa15.85■□□□□ 0.13
LINC00538-201ENST00000626109 PLEKHG1Q9ULL1 1385 aa15.84■□□□□ 0.13
LINC00538-201ENST00000626109 VASPP50552 380 aaPredicted RBP15.84■□□□□ 0.13
LINC00538-201ENST00000626109 PIK3C2GO75747 1445 aa15.83■□□□□ 0.13
LINC00538-201ENST00000626109 POLR1AO95602 1720 aaPredicted RBP15.83■□□□□ 0.13
LINC00538-201ENST00000626109 USP35Q9P2H5 1018 aa15.83■□□□□ 0.12
LINC00538-201ENST00000626109 NCKAP5LQ9HCH0 1330 aa15.81■□□□□ 0.12
LINC00538-201ENST00000626109 APBB1O00213 710 aa15.81■□□□□ 0.12
LINC00538-201ENST00000626109 SETBP1Q9Y6X0 1596 aa15.81■□□□□ 0.12
LINC00538-201ENST00000626109 NBPF8Q3BBV2 869 aa15.8■□□□□ 0.12
LINC00538-201ENST00000626109 ZNF592Q92610 1267 aa15.8■□□□□ 0.12
LINC00538-201ENST00000626109 NPHP4O75161 1426 aaPredicted RBP15.8■□□□□ 0.12
LINC00538-201ENST00000626109 ZFP91Q96JP5 570 aaPredicted RBP15.8■□□□□ 0.12
LINC00538-201ENST00000626109 MED14O60244 1454 aa15.8■□□□□ 0.12
LINC00538-201ENST00000626109 LAMC1P11047 1609 aa15.79■□□□□ 0.12
LINC00538-201ENST00000626109 IQGAP1P46940 1657 aa15.79■□□□□ 0.12
LINC00538-201ENST00000626109 NRXN3Q9Y4C0 1643 aa15.78■□□□□ 0.12
LINC00538-201ENST00000626109 FAM177A1Q8N128 213 aaPredicted RBP15.78■□□□□ 0.12
LINC00538-201ENST00000626109 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.78■□□□□ 0.12
LINC00538-201ENST00000626109 RALGAPBQ86X10 1494 aa15.77■□□□□ 0.12
LINC00538-201ENST00000626109 TRPM1Q7Z4N2 1603 aa15.77■□□□□ 0.12
LINC00538-201ENST00000626109 CFAP70Q5T0N1 1121 aa15.77■□□□□ 0.12
LINC00538-201ENST00000626109 C14orf93Q9H972 538 aaKnown RBP15.77■□□□□ 0.12
LINC00538-201ENST00000626109 DIP2AQ14689 1571 aa15.77■□□□□ 0.11
LINC00538-201ENST00000626109 KIAA1210Q9ULL0 1709 aa15.77■□□□□ 0.11
LINC00538-201ENST00000626109 ALKQ9UM73 1620 aa15.77■□□□□ 0.11
LINC00538-201ENST00000626109 ADAMTS13Q76LX8 1427 aa15.76■□□□□ 0.11
LINC00538-201ENST00000626109 CWC22Q9HCG8 908 aaKnown RBP15.76■□□□□ 0.11
LINC00538-201ENST00000626109 ROCK2O75116 1388 aaKnown RBP15.75■□□□□ 0.11
LINC00538-201ENST00000626109 STRCQ7RTU9 1775 aa15.75■□□□□ 0.11
LINC00538-201ENST00000626109 SLC26A8Q96RN1 970 aa15.75■□□□□ 0.11
LINC00538-201ENST00000626109 TICAM2Q86XR7 235 aa15.74■□□□□ 0.11
LINC00538-201ENST00000626109 TBX22Q9Y458 520 aa15.74■□□□□ 0.11
LINC00538-201ENST00000626109 A0A0U1RQG5 324 aaPredicted RBP15.73■□□□□ 0.11
LINC00538-201ENST00000626109 SETD1AO15047 1707 aaKnown RBP15.72■□□□□ 0.11
LINC00538-201ENST00000626109 DDX10Q13206 875 aaKnown RBP15.72■□□□□ 0.11
LINC00538-201ENST00000626109 DMRT2Q9Y5R5 561 aa15.72■□□□□ 0.11
LINC00538-201ENST00000626109 NBPF1Q3BBV0 1214 aa15.72■□□□□ 0.11
LINC00538-201ENST00000626109 GPRASP1Q5JY77 1395 aa15.71■□□□□ 0.11
LINC00538-201ENST00000626109 ASXL1Q8IXJ9 1541 aa15.71■□□□□ 0.11
LINC00538-201ENST00000626109 ADGRB1O14514 1584 aa15.71■□□□□ 0.11
LINC00538-201ENST00000626109 METP08581 1390 aa15.7■□□□□ 0.1
LINC00538-201ENST00000626109 TMEM132EQ6IEE7 984 aa15.7■□□□□ 0.1
LINC00538-201ENST00000626109 CARD11Q9BXL7 1154 aa15.7■□□□□ 0.1
LINC00538-201ENST00000626109 PIK3R4Q99570 1358 aa15.7■□□□□ 0.1
LINC00538-201ENST00000626109 ECM2O94769 699 aaPredicted RBP15.7■□□□□ 0.1
LINC00538-201ENST00000626109 AEBP1Q8IUX7 1158 aa15.7■□□□□ 0.1
LINC00538-201ENST00000626109 CCER2I3L3R5 266 aa15.69■□□□□ 0.1
LINC00538-201ENST00000626109 CERS3Q8IU89 383 aa15.69■□□□□ 0.1
LINC00538-201ENST00000626109 ANP32CO43423 234 aa15.68■□□□□ 0.1
LINC00538-201ENST00000626109 SUPT16HQ9Y5B9 1047 aaKnown RBP15.68■□□□□ 0.1
LINC00538-201ENST00000626109 YTHDC2Q9H6S0 1430 aaKnown RBP15.67■□□□□ 0.1
LINC00538-201ENST00000626109 LRPPRCP42704 1394 aaKnown RBP15.67■□□□□ 0.1
LINC00538-201ENST00000626109 TMED8Q6PL24 325 aaPredicted RBP15.66■□□□□ 0.1
LINC00538-201ENST00000626109 PSMD1Q99460 953 aa15.66■□□□□ 0.1
LINC00538-201ENST00000626109 PIAS4Q8N2W9 510 aaPredicted RBP15.66■□□□□ 0.1
LINC00538-201ENST00000626109 STK26Q9P289 416 aa15.66■□□□□ 0.1
LINC00538-201ENST00000626109 PPM1GO15355 546 aaPredicted RBP15.65■□□□□ 0.1
LINC00538-201ENST00000626109 LMOD2Q6P5Q4 547 aa15.65■□□□□ 0.1
LINC00538-201ENST00000626109 PTPRUQ92729 1446 aa15.65■□□□□ 0.1
LINC00538-201ENST00000626109 EIF3AQ14152 1382 aaKnown RBP15.64■□□□□ 0.09
LINC00538-201ENST00000626109 ABCC11Q96J66 1382 aa15.64■□□□□ 0.09
LINC00538-201ENST00000626109 CLSTN1O94985 981 aa15.64■□□□□ 0.09
LINC00538-201ENST00000626109 TRAK1Q9UPV9 953 aa15.64■□□□□ 0.09
LINC00538-201ENST00000626109 AMOTL2Q9Y2J4 779 aa15.64■□□□□ 0.09
LINC00538-201ENST00000626109 USP47Q96K76 1375 aa15.64■□□□□ 0.09
LINC00538-201ENST00000626109 TECPR2O15040 1411 aa15.63■□□□□ 0.09
LINC00538-201ENST00000626109 KNDC1Q76NI1 1749 aa15.63■□□□□ 0.09
LINC00538-201ENST00000626109 RGL2O15211 777 aa15.63■□□□□ 0.09
LINC00538-201ENST00000626109 NWD1Q149M9 1564 aa15.63■□□□□ 0.09
LINC00538-201ENST00000626109 DLC1Q96QB1 1528 aa15.63■□□□□ 0.09
LINC00538-201ENST00000626109 XRN1Q8IZH2 1706 aaKnown RBP15.63■□□□□ 0.09
LINC00538-201ENST00000626109 KCNA6P17658 529 aa15.62■□□□□ 0.09
LINC00538-201ENST00000626109 MFAP1P55081 439 aaKnown RBP15.62■□□□□ 0.09
LINC00538-201ENST00000626109 TMCO4Q5TGY1 634 aa15.62■□□□□ 0.09
LINC00538-201ENST00000626109 CHD2O14647 1828 aaKnown RBP15.62■□□□□ 0.09
LINC00538-201ENST00000626109 ATXN8OSP0DMR3 200 aa15.62■□□□□ 0.09
LINC00538-201ENST00000626109 EIF4G2P78344 907 aaKnown RBP eCLIP15.62■□□□□ 0.09
LINC00538-201ENST00000626109 CPS1P31327 1500 aa15.62■□□□□ 0.09
LINC00538-201ENST00000626109 PTCH1Q13635 1447 aa15.61■□□□□ 0.09
LINC00538-201ENST00000626109 ARHGEF28Q8N1W1 1705 aaKnown RBP15.6■□□□□ 0.09
LINC00538-201ENST00000626109 NKTRP30414 1462 aaKnown RBP15.6■□□□□ 0.09
LINC00538-201ENST00000626109 FAM135BQ49AJ0 1406 aa15.59■□□□□ 0.09
LINC00538-201ENST00000626109 POGKQ9P215 609 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms