RNA–Protein interactions for RNA: ENST00000625990.2

CHD2-206, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-206ENST00000625990 MPHOSPH9Q99550 1183 aa13.29□□□□□ -0.28
CHD2-206ENST00000625990 C19orf44Q9H6X5 657 aa13.29□□□□□ -0.28
CHD2-206ENST00000625990 PIK3R4Q99570 1358 aa13.29□□□□□ -0.28
CHD2-206ENST00000625990 PPLO60437 1756 aa13.28□□□□□ -0.28
CHD2-206ENST00000625990 MST1RQ04912 1400 aa13.28□□□□□ -0.28
CHD2-206ENST00000625990 RBM42Q9BTD8 480 aaKnown RBP13.27□□□□□ -0.29
CHD2-206ENST00000625990 ASXL1Q8IXJ9 1541 aa13.27□□□□□ -0.29
CHD2-206ENST00000625990 CADPS2Q86UW7 1296 aa13.26□□□□□ -0.29
CHD2-206ENST00000625990 STK26Q9P289 416 aa13.26□□□□□ -0.29
CHD2-206ENST00000625990 CCDC144AA2RUR9 1427 aa13.25□□□□□ -0.29
CHD2-206ENST00000625990 SPATA31E1Q6ZUB1 1445 aa13.25□□□□□ -0.29
CHD2-206ENST00000625990 ADGRL3Q9HAR2 1447 aa13.25□□□□□ -0.29
CHD2-206ENST00000625990 RAB3GAP2Q9H2M9 1393 aa13.25□□□□□ -0.29
CHD2-206ENST00000625990 NUTM2BA6NNL0 878 aaPredicted RBP13.25□□□□□ -0.29
CHD2-206ENST00000625990 NUTM2EB1AL46 878 aaPredicted RBP13.25□□□□□ -0.29
CHD2-206ENST00000625990 TMEM132EQ6IEE7 984 aa13.25□□□□□ -0.29
CHD2-206ENST00000625990 NUTM2AQ8IVF1 878 aaPredicted RBP13.25□□□□□ -0.29
CHD2-206ENST00000625990 AHDC1Q5TGY3 1603 aaPredicted RBP13.24□□□□□ -0.29
CHD2-206ENST00000625990 SETD5Q9C0A6 1442 aa13.24□□□□□ -0.29
CHD2-206ENST00000625990 NCOA3Q9Y6Q9 1424 aa13.24□□□□□ -0.29
CHD2-206ENST00000625990 JCADQ9P266 1359 aa13.24□□□□□ -0.29
CHD2-206ENST00000625990 PLEKHH1Q9ULM0 1364 aa13.23□□□□□ -0.29
CHD2-206ENST00000625990 NUTM2FA1L443 756 aa13.23□□□□□ -0.29
CHD2-206ENST00000625990 WAPLQ7Z5K2 1190 aa13.23□□□□□ -0.29
CHD2-206ENST00000625990 ORAI2Q96SN7 254 aa13.23□□□□□ -0.29
CHD2-206ENST00000625990 VGFO15240 615 aaPredicted RBP13.22□□□□□ -0.29
CHD2-206ENST00000625990 IFT172Q9UG01 1749 aa13.22□□□□□ -0.29
CHD2-206ENST00000625990 XPCQ01831 940 aaPredicted RBP13.2□□□□□ -0.3
CHD2-206ENST00000625990 C1orf167Q5SNV9 1468 aa13.2□□□□□ -0.3
CHD2-206ENST00000625990 DCCP43146 1447 aa13.2□□□□□ -0.3
CHD2-206ENST00000625990 PTCH1Q13635 1447 aa13.2□□□□□ -0.3
CHD2-206ENST00000625990 NHSL1Q5SYE7 1610 aa13.2□□□□□ -0.3
CHD2-206ENST00000625990 RPGRIP1LQ68CZ1 1315 aa13.19□□□□□ -0.3
CHD2-206ENST00000625990 MEX3CQ5U5Q3 659 aaKnown RBP13.19□□□□□ -0.3
CHD2-206ENST00000625990 SHPRHQ149N8 1683 aa13.18□□□□□ -0.3
CHD2-206ENST00000625990 PIK3C2GO75747 1445 aa13.17□□□□□ -0.3
CHD2-206ENST00000625990 CFAP70Q5T0N1 1121 aa13.17□□□□□ -0.3
CHD2-206ENST00000625990 SAFB2Q14151 953 aaKnown RBP eCLIP13.16□□□□□ -0.3
CHD2-206ENST00000625990 PLEKHG5O94827 1062 aa13.15□□□□□ -0.3
CHD2-206ENST00000625990 PNPLA6Q8IY17 1366 aa13.15□□□□□ -0.3
CHD2-206ENST00000625990 ADAMTS2O95450 1211 aa13.14□□□□□ -0.31
CHD2-206ENST00000625990 AKT1S1Q96B36 256 aa13.14□□□□□ -0.31
CHD2-206ENST00000625990 FBXO3Q9UK99 471 aa13.14□□□□□ -0.31
CHD2-206ENST00000625990 KDM2AQ9Y2K7 1162 aa13.14□□□□□ -0.31
CHD2-206ENST00000625990 SPATA31A6Q5VVP1 1343 aa13.13□□□□□ -0.31
CHD2-206ENST00000625990 LRPPRCP42704 1394 aaKnown RBP13.13□□□□□ -0.31
CHD2-206ENST00000625990 ESCO1Q5FWF5 840 aa13.13□□□□□ -0.31
CHD2-206ENST00000625990 C8orf37Q96NL8 207 aa13.13□□□□□ -0.31
CHD2-206ENST00000625990 YTHDC2Q9H6S0 1430 aaKnown RBP13.13□□□□□ -0.31
CHD2-206ENST00000625990 ANKRD30BQ9BXX2 1392 aa13.12□□□□□ -0.31
CHD2-206ENST00000625990 PRAG1Q86YV5 1406 aa13.12□□□□□ -0.31
CHD2-206ENST00000625990 AFF2P51816 1311 aa13.12□□□□□ -0.31
CHD2-206ENST00000625990 CDC42BPGQ6DT37 1551 aa13.11□□□□□ -0.31
CHD2-206ENST00000625990 NRXN1Q9ULB1 1477 aa13.1□□□□□ -0.31
CHD2-206ENST00000625990 FOXO3O43524 673 aa13.1□□□□□ -0.31
CHD2-206ENST00000625990 TECPR2O15040 1411 aa13.1□□□□□ -0.31
CHD2-206ENST00000625990 KNDC1Q76NI1 1749 aa13.09□□□□□ -0.31
CHD2-206ENST00000625990 LRRC59Q96AG4 307 aaKnown RBP13.09□□□□□ -0.31
CHD2-206ENST00000625990 PRAM1Q96QH2 718 aa13.09□□□□□ -0.31
CHD2-206ENST00000625990 HIRIP3Q9BW71 556 aaPredicted RBP13.09□□□□□ -0.31
CHD2-206ENST00000625990 C14orf93Q9H972 538 aaKnown RBP13.09□□□□□ -0.31
CHD2-206ENST00000625990 PXDNQ92626 1479 aa13.09□□□□□ -0.31
CHD2-206ENST00000625990 SOS2Q07890 1332 aaPredicted RBP13.09□□□□□ -0.31
CHD2-206ENST00000625990 DCAF11Q8TEB1 546 aa13.08□□□□□ -0.32
CHD2-206ENST00000625990 MYOM2P54296 1465 aa13.08□□□□□ -0.32
CHD2-206ENST00000625990 ABCC11Q96J66 1382 aa13.07□□□□□ -0.32
CHD2-206ENST00000625990 LAMC1P11047 1609 aa13.07□□□□□ -0.32
CHD2-206ENST00000625990 TRAK1Q9UPV9 953 aa13.07□□□□□ -0.32
CHD2-206ENST00000625990 FMN2Q9NZ56 1722 aa13.07□□□□□ -0.32
CHD2-206ENST00000625990 RGPD8O14715 1765 aaPredicted RBP13.07□□□□□ -0.32
CHD2-206ENST00000625990 DHX57Q6P158 1386 aaKnown RBP13.07□□□□□ -0.32
CHD2-206ENST00000625990 ADGRB1O14514 1584 aa13.06□□□□□ -0.32
CHD2-206ENST00000625990 ZNF772Q68DY9 489 aaPredicted RBP13.04□□□□□ -0.32
CHD2-206ENST00000625990 NGLY1Q96IV0 654 aa13.04□□□□□ -0.32
CHD2-206ENST00000625990 MINK1Q8N4C8 1332 aaPredicted RBP13.04□□□□□ -0.32
CHD2-206ENST00000625990 RGS12O14924 1447 aa13.04□□□□□ -0.32
CHD2-206ENST00000625990 USP32Q8NFA0 1604 aa13.03□□□□□ -0.32
CHD2-206ENST00000625990 RXRBP28702 533 aa13.03□□□□□ -0.32
CHD2-206ENST00000625990 PMFBP1Q8TBY8 1022 aa13.03□□□□□ -0.32
CHD2-206ENST00000625990 CABLES1Q8TDN4 633 aa13.03□□□□□ -0.32
CHD2-206ENST00000625990 QTRT2Q9H974 415 aaKnown RBP13.03□□□□□ -0.32
CHD2-206ENST00000625990 POGKQ9P215 609 aa13.02□□□□□ -0.33
CHD2-206ENST00000625990 REM2Q8IYK8 340 aaPredicted RBP13.01□□□□□ -0.33
CHD2-206ENST00000625990 NPHP3Q7Z494 1330 aa13.01□□□□□ -0.33
CHD2-206ENST00000625990 PRR36Q9H6K5 1346 aa13.01□□□□□ -0.33
CHD2-206ENST00000625990 COL22A1Q8NFW1 1626 aaPredicted RBP13.01□□□□□ -0.33
CHD2-206ENST00000625990 KRT28Q7Z3Y7 464 aa13□□□□□ -0.33
CHD2-206ENST00000625990 LMOD2Q6P5Q4 547 aa12.99□□□□□ -0.33
CHD2-206ENST00000625990 UPF1Q92900 1129 aaKnown RBP eCLIP12.99□□□□□ -0.33
CHD2-206ENST00000625990 USP21Q9UK80 565 aa12.99□□□□□ -0.33
CHD2-206ENST00000625990 PHF8Q9UPP1 1060 aa12.99□□□□□ -0.33
CHD2-206ENST00000625990 NBPF1Q3BBV0 1214 aa12.98□□□□□ -0.33
CHD2-206ENST00000625990 DLC1Q96QB1 1528 aa12.98□□□□□ -0.33
CHD2-206ENST00000625990 SPATA31A3Q5VYP0 1347 aa12.97□□□□□ -0.33
CHD2-206ENST00000625990 VASPP50552 380 aaPredicted RBP12.97□□□□□ -0.33
CHD2-206ENST00000625990 SIN3AQ96ST3 1273 aa12.97□□□□□ -0.33
CHD2-206ENST00000625990 BCL9LQ86UU0 1499 aa12.97□□□□□ -0.33
CHD2-206ENST00000625990 KIF1AQ12756 1690 aa12.96□□□□□ -0.33
CHD2-206ENST00000625990 SPDYE1Q8NFV5 336 aaPredicted RBP12.96□□□□□ -0.33
CHD2-206ENST00000625990 ARHGEF28Q8N1W1 1705 aaKnown RBP12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms