RNA–Protein interactions for RNA: ENST00000623495.1

LETMD1-238, Transcript of LETM1 domain containing 1, human

Gene LETMD1, Length 2,948 nt, Biotype TEC.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-238	ENST00000623495	PLEKHG1	Q9ULL1	1385 aa		9.92	□□□□□ -0.82
LETMD1-238	ENST00000623495	ZC3H13	Q5T200	1668 aa	Known RBP	9.92	□□□□□ -0.82
LETMD1-238	ENST00000623495	ROBO2	Q9HCK4	1378 aa		9.91	□□□□□ -0.82
LETMD1-238	ENST00000623495	SLC4A2	P04920	1241 aa		9.91	□□□□□ -0.82
LETMD1-238	ENST00000623495	ZFYVE9	O95405	1425 aa		9.91	□□□□□ -0.82
LETMD1-238	ENST00000623495	RNF216	Q9NWF9	866 aa	Predicted RBP	9.9	□□□□□ -0.82
LETMD1-238	ENST00000623495	HAP1	P54257	671 aa	Predicted RBP	9.9	□□□□□ -0.82
LETMD1-238	ENST00000623495	SLAIN2	Q9P270	581 aa		9.9	□□□□□ -0.82
LETMD1-238	ENST00000623495	FANCI	Q9NVI1	1328 aa		9.9	□□□□□ -0.82
LETMD1-238	ENST00000623495	MSH6	P52701	1360 aa		9.89	□□□□□ -0.83
LETMD1-238	ENST00000623495	ADAMTS13	Q76LX8	1427 aa		9.89	□□□□□ -0.83
LETMD1-238	ENST00000623495	SPHKAP	Q2M3C7	1700 aa		9.89	□□□□□ -0.83
LETMD1-238	ENST00000623495	MROH2A	A6NES4	1674 aa		9.89	□□□□□ -0.83
LETMD1-238	ENST00000623495	NGDN	Q8NEJ9	315 aa	Known RBP	9.89	□□□□□ -0.83
LETMD1-238	ENST00000623495	C19orf44	Q9H6X5	657 aa		9.89	□□□□□ -0.83
LETMD1-238	ENST00000623495	PTPRU	Q92729	1446 aa		9.88	□□□□□ -0.83
LETMD1-238	ENST00000623495	TMEM131L	A2VDJ0	1609 aa		9.88	□□□□□ -0.83
LETMD1-238	ENST00000623495	HSPA1L	P34931	641 aa		9.88	□□□□□ -0.83
LETMD1-238	ENST00000623495	MYO5B	Q9ULV0	1848 aa		9.87	□□□□□ -0.83
LETMD1-238	ENST00000623495	UBR1	Q8IWV7	1749 aa		9.87	□□□□□ -0.83
LETMD1-238	ENST00000623495	CADPS2	Q86UW7	1296 aa		9.87	□□□□□ -0.83
LETMD1-238	ENST00000623495	CENPJ	Q9HC77	1338 aa	Predicted RBP	9.87	□□□□□ -0.83
LETMD1-238	ENST00000623495	MSH5	O43196	834 aa		9.86	□□□□□ -0.83
LETMD1-238	ENST00000623495	ADAMTS2	O95450	1211 aa		9.86	□□□□□ -0.83
LETMD1-238	ENST00000623495	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	9.86	□□□□□ -0.83
LETMD1-238	ENST00000623495	SRCAP	Q6ZRS2	3230 aa		9.86	□□□□□ -0.83
LETMD1-238	ENST00000623495	CDK19	Q9BWU1	502 aa		9.86	□□□□□ -0.83
LETMD1-238	ENST00000623495	PSME1	Q06323	249 aa		9.86	□□□□□ -0.83
LETMD1-238	ENST00000623495	YTHDC2	Q9H6S0	1430 aa	Known RBP	9.86	□□□□□ -0.83
LETMD1-238	ENST00000623495	ARHGAP23	Q9P227	1491 aa		9.85	□□□□□ -0.83
LETMD1-238	ENST00000623495	TNNT2	P45379	298 aa	Predicted RBP	9.85	□□□□□ -0.83
LETMD1-238	ENST00000623495	CABLES1	Q8TDN4	633 aa		9.85	□□□□□ -0.83
LETMD1-238	ENST00000623495	CCDC136	Q96JN2	1154 aa		9.85	□□□□□ -0.83
LETMD1-238	ENST00000623495	PODXL2	Q9NZ53	605 aa		9.85	□□□□□ -0.83
LETMD1-238	ENST00000623495	HSPA5	P11021	654 aa	Known RBP	9.85	□□□□□ -0.83
LETMD1-238	ENST00000623495	NEXMIF	Q5QGS0	1516 aa		9.84	□□□□□ -0.83
LETMD1-238	ENST00000623495	EIF4G2	P78344	907 aa	Known RBP eCLIP	9.84	□□□□□ -0.83
LETMD1-238	ENST00000623495	SLIT1	O75093	1534 aa		9.84	□□□□□ -0.83
LETMD1-238	ENST00000623495	CABP1	Q9NZU7	370 aa		9.84	□□□□□ -0.83
LETMD1-238	ENST00000623495	STRC	Q7RTU9	1775 aa		9.84	□□□□□ -0.83
LETMD1-238	ENST00000623495	PRAG1	Q86YV5	1406 aa		9.84	□□□□□ -0.83
LETMD1-238	ENST00000623495	NEURL4	Q96JN8	1562 aa		9.83	□□□□□ -0.84
LETMD1-238	ENST00000623495	PIK3C2G	O75747	1445 aa		9.83	□□□□□ -0.84
LETMD1-238	ENST00000623495	SLC12A5	Q9H2X9	1139 aa		9.83	□□□□□ -0.84
LETMD1-238	ENST00000623495	NUDT16	Q96DE0	195 aa	Known RBP	9.82	□□□□□ -0.84
LETMD1-238	ENST00000623495	KIF1B	O60333	1816 aa		9.82	□□□□□ -0.84
LETMD1-238	ENST00000623495	USP47	Q96K76	1375 aa		9.82	□□□□□ -0.84
LETMD1-238	ENST00000623495	BRINP3	Q76B58	766 aa		9.82	□□□□□ -0.84
LETMD1-238	ENST00000623495	ALK	Q9UM73	1620 aa		9.81	□□□□□ -0.84
LETMD1-238	ENST00000623495	WASL	O00401	505 aa	Predicted RBP	9.81	□□□□□ -0.84
LETMD1-238	ENST00000623495	FKBP8	Q14318	412 aa		9.81	□□□□□ -0.84
LETMD1-238	ENST00000623495	FBXO41	Q8TF61	875 aa		9.81	□□□□□ -0.84
LETMD1-238	ENST00000623495	IQGAP1	P46940	1657 aa		9.81	□□□□□ -0.84
LETMD1-238	ENST00000623495	MEX3C	Q5U5Q3	659 aa	Known RBP	9.81	□□□□□ -0.84
LETMD1-238	ENST00000623495	LRPPRC	P42704	1394 aa	Known RBP	9.81	□□□□□ -0.84
LETMD1-238	ENST00000623495	PPM1G	O15355	546 aa	Predicted RBP	9.8	□□□□□ -0.84
LETMD1-238	ENST00000623495	PHF8	Q9UPP1	1060 aa		9.8	□□□□□ -0.84
LETMD1-238	ENST00000623495	LRRC7	Q96NW7	1537 aa		9.8	□□□□□ -0.84
LETMD1-238	ENST00000623495		A0A0G2JS52	829 aa		9.8	□□□□□ -0.84
LETMD1-238	ENST00000623495	FBLN1	P23142	703 aa		9.79	□□□□□ -0.84
LETMD1-238	ENST00000623495	USP35	Q9P2H5	1018 aa		9.79	□□□□□ -0.84
LETMD1-238	ENST00000623495	CCDC9	Q9Y3X0	531 aa	Known RBP	9.79	□□□□□ -0.84
LETMD1-238	ENST00000623495	MED14	O60244	1454 aa		9.79	□□□□□ -0.84
LETMD1-238	ENST00000623495	ZC3H6	P61129	1189 aa	Known RBP	9.78	□□□□□ -0.84
LETMD1-238	ENST00000623495	EVC2	Q86UK5	1308 aa		9.78	□□□□□ -0.84
LETMD1-238	ENST00000623495	ABCC11	Q96J66	1382 aa		9.78	□□□□□ -0.84
LETMD1-238	ENST00000623495	PRR36	Q9H6K5	1346 aa		9.78	□□□□□ -0.84
LETMD1-238	ENST00000623495	TMF1	P82094	1093 aa		9.78	□□□□□ -0.84
LETMD1-238	ENST00000623495	KRT28	Q7Z3Y7	464 aa		9.78	□□□□□ -0.84
LETMD1-238	ENST00000623495	C8orf37	Q96NL8	207 aa		9.78	□□□□□ -0.84
LETMD1-238	ENST00000623495	ABTB2	Q8N961	1025 aa		9.77	□□□□□ -0.84
LETMD1-238	ENST00000623495	C11orf95	C9JLR9	678 aa	Predicted RBP	9.77	□□□□□ -0.85
LETMD1-238	ENST00000623495	CCDC61	Q9Y6R9	512 aa		9.77	□□□□□ -0.85
LETMD1-238	ENST00000623495	ZNF142	P52746	1687 aa	Predicted RBP	9.77	□□□□□ -0.85
LETMD1-238	ENST00000623495	DDX10	Q13206	875 aa	Known RBP	9.76	□□□□□ -0.85
LETMD1-238	ENST00000623495	STAC3	Q96MF2	364 aa		9.76	□□□□□ -0.85
LETMD1-238	ENST00000623495	ZRANB1	Q9UGI0	708 aa		9.76	□□□□□ -0.85
LETMD1-238	ENST00000623495	ACE	P12821	1306 aa		9.76	□□□□□ -0.85
LETMD1-238	ENST00000623495	EIF3A	Q14152	1382 aa	Known RBP	9.76	□□□□□ -0.85
LETMD1-238	ENST00000623495	CHRNA2	Q15822	529 aa		9.76	□□□□□ -0.85
LETMD1-238	ENST00000623495	SENP3-EIF4A1	A0A087X0R7	540 aa		9.75	□□□□□ -0.85
LETMD1-238	ENST00000623495	NLRP6	P59044	892 aa		9.75	□□□□□ -0.85
LETMD1-238	ENST00000623495	LTV1	Q96GA3	475 aa	Predicted RBP	9.75	□□□□□ -0.85
LETMD1-238	ENST00000623495	CC2D1B	Q5T0F9	858 aa	Known RBP	9.74	□□□□□ -0.85
LETMD1-238	ENST00000623495	GGNBP2	Q9H3C7	697 aa		9.74	□□□□□ -0.85
LETMD1-238	ENST00000623495	NGLY1	Q96IV0	654 aa		9.74	□□□□□ -0.85
LETMD1-238	ENST00000623495	PIK3R4	Q99570	1358 aa		9.74	□□□□□ -0.85
LETMD1-238	ENST00000623495	POLR1A	O95602	1720 aa	Predicted RBP	9.73	□□□□□ -0.85
LETMD1-238	ENST00000623495	MYOM2	P54296	1465 aa		9.73	□□□□□ -0.85
LETMD1-238	ENST00000623495	ASXL1	Q8IXJ9	1541 aa		9.73	□□□□□ -0.85
LETMD1-238	ENST00000623495	HOXD11	P31277	338 aa	Predicted RBP	9.73	□□□□□ -0.85
LETMD1-238	ENST00000623495	STRN4	Q9NRL3	753 aa		9.73	□□□□□ -0.85
LETMD1-238	ENST00000623495	TIMELESS	Q9UNS1	1208 aa		9.73	□□□□□ -0.85
LETMD1-238	ENST00000623495	DISP3	Q9P2K9	1392 aa		9.73	□□□□□ -0.85
LETMD1-238	ENST00000623495	ADGRL3	Q9HAR2	1447 aa		9.73	□□□□□ -0.85
LETMD1-238	ENST00000623495	TESK2	Q96S53	571 aa		9.72	□□□□□ -0.85
LETMD1-238	ENST00000623495	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	9.72	□□□□□ -0.85
LETMD1-238	ENST00000623495	LTBP4	Q8N2S1	1624 aa		9.72	□□□□□ -0.85
LETMD1-238	ENST00000623495	NPHP3	Q7Z494	1330 aa		9.72	□□□□□ -0.85
LETMD1-238	ENST00000623495	NME9	Q86XW9	330 aa		9.72	□□□□□ -0.85

Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms