RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 TRAK1Q9UPV9 953 aa26.24■■□□□ 1.79
LITAF-220ENST00000620789 ROBO1Q9Y6N7 1651 aa26.22■■□□□ 1.79
LITAF-220ENST00000620789 CDC42BPGQ6DT37 1551 aa26.22■■□□□ 1.79
LITAF-220ENST00000620789 PRAM1Q96QH2 718 aa26.22■■□□□ 1.79
LITAF-220ENST00000620789 MST1RQ04912 1400 aa26.21■■□□□ 1.79
LITAF-220ENST00000620789 ARHGEF28Q8N1W1 1705 aaKnown RBP26.2■■□□□ 1.79
LITAF-220ENST00000620789 NBPF8Q3BBV2 869 aa26.19■■□□□ 1.78
LITAF-220ENST00000620789 POGKQ9P215 609 aa26.19■■□□□ 1.78
LITAF-220ENST00000620789 HSPA1LP34931 641 aa26.16■■□□□ 1.78
LITAF-220ENST00000620789 SAFB2Q14151 953 aaKnown RBP eCLIP26.16■■□□□ 1.78
LITAF-220ENST00000620789 TIMELESSQ9UNS1 1208 aa26.15■■□□□ 1.78
LITAF-220ENST00000620789 ROCK2O75116 1388 aaKnown RBP26.15■■□□□ 1.78
LITAF-220ENST00000620789 C1orf167Q5SNV9 1468 aa26.13■■□□□ 1.77
LITAF-220ENST00000620789 ADGRB2O60241 1585 aa26.12■■□□□ 1.77
LITAF-220ENST00000620789 RALGAPBQ86X10 1494 aa26.12■■□□□ 1.77
LITAF-220ENST00000620789 GPRASP1Q5JY77 1395 aa26.11■■□□□ 1.77
LITAF-220ENST00000620789 BRINP3Q76B58 766 aa26.11■■□□□ 1.77
LITAF-220ENST00000620789 FMN2Q9NZ56 1722 aa26.11■■□□□ 1.77
LITAF-220ENST00000620789 MINK1Q8N4C8 1332 aaPredicted RBP26.08■■□□□ 1.77
LITAF-220ENST00000620789 HIRIP3Q9BW71 556 aaPredicted RBP26.06■■□□□ 1.76
LITAF-220ENST00000620789 AHDC1Q5TGY3 1603 aaPredicted RBP26.06■■□□□ 1.76
LITAF-220ENST00000620789 PHLPP1O60346 1717 aa26.05■■□□□ 1.76
LITAF-220ENST00000620789 CENPJQ9HC77 1338 aaPredicted RBP26.04■■□□□ 1.76
LITAF-220ENST00000620789 NHSL1Q5SYE7 1610 aa26.03■■□□□ 1.76
LITAF-220ENST00000620789 NUTM2FA1L443 756 aa26.03■■□□□ 1.76
LITAF-220ENST00000620789 ORAI2Q96SN7 254 aa26.03■■□□□ 1.76
LITAF-220ENST00000620789 CARD11Q9BXL7 1154 aa26.03■■□□□ 1.76
LITAF-220ENST00000620789 QRICH2Q9H0J4 1663 aa26.02■■□□□ 1.76
LITAF-220ENST00000620789 COL16A1Q07092 1604 aaPredicted RBP26.01■■□□□ 1.75
LITAF-220ENST00000620789 EIF3AQ14152 1382 aaKnown RBP26.01■■□□□ 1.75
LITAF-220ENST00000620789 WASLO00401 505 aaPredicted RBP26■■□□□ 1.75
LITAF-220ENST00000620789 ESCO1Q5FWF5 840 aa26■■□□□ 1.75
LITAF-220ENST00000620789 ANKARQ7Z5J8 1434 aa25.99■■□□□ 1.75
LITAF-220ENST00000620789 USP32Q8NFA0 1604 aa25.98■■□□□ 1.75
LITAF-220ENST00000620789 TULP4Q9NRJ4 1543 aa25.98■■□□□ 1.75
LITAF-220ENST00000620789 RGPD8O14715 1765 aaPredicted RBP25.97■■□□□ 1.75
LITAF-220ENST00000620789 KIF1AQ12756 1690 aa25.96■■□□□ 1.75
LITAF-220ENST00000620789 DDX17Q92841 729 aaKnown RBP25.94■■□□□ 1.74
LITAF-220ENST00000620789 PRR36Q9H6K5 1346 aa25.92■■□□□ 1.74
LITAF-220ENST00000620789 CDK19Q9BWU1 502 aa25.92■■□□□ 1.74
LITAF-220ENST00000620789 ATP7BP35670 1465 aa25.91■■□□□ 1.74
LITAF-220ENST00000620789 NPHP3Q7Z494 1330 aa25.9■■□□□ 1.74
LITAF-220ENST00000620789 PHF8Q9UPP1 1060 aa25.9■■□□□ 1.74
LITAF-220ENST00000620789 FOXO3O43524 673 aa25.89■■□□□ 1.74
LITAF-220ENST00000620789 JCADQ9P266 1359 aa25.89■■□□□ 1.74
LITAF-220ENST00000620789 SOS2Q07890 1332 aaPredicted RBP25.88■■□□□ 1.73
LITAF-220ENST00000620789 ITSN1Q15811 1721 aa25.88■■□□□ 1.73
LITAF-220ENST00000620789 SBNO2Q9Y2G9 1366 aa25.88■■□□□ 1.73
LITAF-220ENST00000620789 PXDNQ92626 1479 aa25.87■■□□□ 1.73
LITAF-220ENST00000620789 NUDT16Q96DE0 195 aaKnown RBP25.87■■□□□ 1.73
LITAF-220ENST00000620789 LRRC59Q96AG4 307 aaKnown RBP25.86■■□□□ 1.73
LITAF-220ENST00000620789 SHPRHQ149N8 1683 aa25.86■■□□□ 1.73
LITAF-220ENST00000620789 TOPAZ1Q8N9V7 1692 aa25.85■■□□□ 1.73
LITAF-220ENST00000620789 SRPK2P78362 688 aaKnown RBP25.85■■□□□ 1.73
LITAF-220ENST00000620789 EVC2Q86UK5 1308 aa25.85■■□□□ 1.73
LITAF-220ENST00000620789 PMFBP1Q8TBY8 1022 aa25.84■■□□□ 1.73
LITAF-220ENST00000620789 USP47Q96K76 1375 aa25.82■■□□□ 1.72
LITAF-220ENST00000620789 XPCQ01831 940 aaPredicted RBP25.82■■□□□ 1.72
LITAF-220ENST00000620789 CABP2Q9NPB3 220 aa25.82■■□□□ 1.72
LITAF-220ENST00000620789 CCDC61Q9Y6R9 512 aa25.81■■□□□ 1.72
LITAF-220ENST00000620789 MED1Q15648 1581 aaPredicted RBP25.81■■□□□ 1.72
LITAF-220ENST00000620789 ST20-MTHFSA0A0A6YYL1 179 aa25.8■■□□□ 1.72
LITAF-220ENST00000620789 KRT28Q7Z3Y7 464 aa25.79■■□□□ 1.72
LITAF-220ENST00000620789 PNPLA6Q8IY17 1366 aa25.79■■□□□ 1.72
LITAF-220ENST00000620789 SPATA31A6Q5VVP1 1343 aa25.78■■□□□ 1.72
LITAF-220ENST00000620789 PSME1Q06323 249 aa25.77■■□□□ 1.72
LITAF-220ENST00000620789 TESK2Q96S53 571 aa25.77■■□□□ 1.72
LITAF-220ENST00000620789 NGDNQ8NEJ9 315 aaKnown RBP25.76■■□□□ 1.71
LITAF-220ENST00000620789 PPIP5K1Q6PFW1 1433 aa25.76■■□□□ 1.71
LITAF-220ENST00000620789 PLEKHG3A1L390 1219 aa25.75■■□□□ 1.71
LITAF-220ENST00000620789 POLR3AO14802 1390 aaPredicted RBP25.74■■□□□ 1.71
LITAF-220ENST00000620789 SBNO1A3KN83 1393 aa25.73■■□□□ 1.71
LITAF-220ENST00000620789 SPATA31A3Q5VYP0 1347 aa25.73■■□□□ 1.71
LITAF-220ENST00000620789 SLC24A1O60721 1099 aa25.73■■□□□ 1.71
LITAF-220ENST00000620789 COL22A1Q8NFW1 1626 aaPredicted RBP25.73■■□□□ 1.71
LITAF-220ENST00000620789 TNS3Q68CZ2 1445 aa25.72■■□□□ 1.71
LITAF-220ENST00000620789 ATAD2Q6PL18 1390 aa25.72■■□□□ 1.71
LITAF-220ENST00000620789 TRPM3Q9HCF6 1732 aaPredicted RBP25.72■■□□□ 1.71
LITAF-220ENST00000620789 ACEP12821 1306 aa25.72■■□□□ 1.71
LITAF-220ENST00000620789 LRP6O75581 1613 aa25.71■■□□□ 1.71
LITAF-220ENST00000620789 CABP1Q9NZU7 370 aa25.7■■□□□ 1.7
LITAF-220ENST00000620789 DISP3Q9P2K9 1392 aa25.68■■□□□ 1.7
LITAF-220ENST00000620789 PUS7Q96PZ0 661 aaKnown RBP25.67■■□□□ 1.7
LITAF-220ENST00000620789 NUTM2BA6NNL0 878 aaPredicted RBP25.66■■□□□ 1.7
LITAF-220ENST00000620789 NUTM2EB1AL46 878 aaPredicted RBP25.66■■□□□ 1.7
LITAF-220ENST00000620789 NUTM2AQ8IVF1 878 aaPredicted RBP25.66■■□□□ 1.7
LITAF-220ENST00000620789 ALS2Q96Q42 1657 aa25.66■■□□□ 1.7
LITAF-220ENST00000620789 ARHGEF10O15013 1369 aa25.66■■□□□ 1.7
LITAF-220ENST00000620789 EIF4G2P78344 907 aaKnown RBP eCLIP25.65■■□□□ 1.7
LITAF-220ENST00000620789 TMF1P82094 1093 aa25.65■■□□□ 1.7
LITAF-220ENST00000620789 LMOD2Q6P5Q4 547 aa25.63■■□□□ 1.69
LITAF-220ENST00000620789 PAK3O75914 559 aaPredicted RBP25.62■■□□□ 1.69
LITAF-220ENST00000620789 HSPA5P11021 654 aaKnown RBP25.61■■□□□ 1.69
LITAF-220ENST00000620789 MEX3CQ5U5Q3 659 aaKnown RBP25.61■■□□□ 1.69
LITAF-220ENST00000620789 PHF23Q9BUL5 403 aaPredicted RBP25.61■■□□□ 1.69
LITAF-220ENST00000620789 USP6P35125 1406 aa25.61■■□□□ 1.69
LITAF-220ENST00000620789 BRD4O60885 1362 aaPredicted RBP25.6■■□□□ 1.69
LITAF-220ENST00000620789 AKAP12Q02952 1782 aa25.6■■□□□ 1.69
LITAF-220ENST00000620789 CPSF1Q10570 1443 aaKnown RBP25.59■■□□□ 1.69
LITAF-220ENST00000620789 TMC1Q8TDI8 760 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms