RNA–Protein interactions for RNA: ENST00000620242.1

SRSF3-206, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-206ENST00000620242 PIP4K2BP78356 416 aa18.36■□□□□ 0.53
SRSF3-206ENST00000620242 NBPF1Q3BBV0 1214 aa18.36■□□□□ 0.53
SRSF3-206ENST00000620242 GPRASP1Q5JY77 1395 aa18.36■□□□□ 0.53
SRSF3-206ENST00000620242 TRPM1Q7Z4N2 1603 aa18.36■□□□□ 0.53
SRSF3-206ENST00000620242 WAPLQ7Z5K2 1190 aa18.36■□□□□ 0.53
SRSF3-206ENST00000620242 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.36■□□□□ 0.53
SRSF3-206ENST00000620242 CARD11Q9BXL7 1154 aa18.35■□□□□ 0.53
SRSF3-206ENST00000620242 RALGAPBQ86X10 1494 aa18.34■□□□□ 0.53
SRSF3-206ENST00000620242 CDC42BPGQ6DT37 1551 aa18.34■□□□□ 0.53
SRSF3-206ENST00000620242 NBPF8Q3BBV2 869 aa18.33■□□□□ 0.52
SRSF3-206ENST00000620242 CENPJQ9HC77 1338 aaPredicted RBP18.32■□□□□ 0.52
SRSF3-206ENST00000620242 NALCNQ8IZF0 1738 aa18.32■□□□□ 0.52
SRSF3-206ENST00000620242 PLEKHH1Q9ULM0 1364 aa18.3■□□□□ 0.52
SRSF3-206ENST00000620242 SAFB2Q14151 953 aaKnown RBP eCLIP18.29■□□□□ 0.52
SRSF3-206ENST00000620242 MST1RQ04912 1400 aa18.29■□□□□ 0.52
SRSF3-206ENST00000620242 ADGRB2O60241 1585 aa18.28■□□□□ 0.52
SRSF3-206ENST00000620242 ARHGEF28Q8N1W1 1705 aaKnown RBP18.28■□□□□ 0.52
SRSF3-206ENST00000620242 ANKARQ7Z5J8 1434 aa18.27■□□□□ 0.52
SRSF3-206ENST00000620242 C1orf167Q5SNV9 1468 aa18.26■□□□□ 0.51
SRSF3-206ENST00000620242 WASLO00401 505 aaPredicted RBP18.26■□□□□ 0.51
SRSF3-206ENST00000620242 MINK1Q8N4C8 1332 aaPredicted RBP18.25■□□□□ 0.51
SRSF3-206ENST00000620242 BRINP3Q76B58 766 aa18.25■□□□□ 0.51
SRSF3-206ENST00000620242 ROBO1Q9Y6N7 1651 aa18.24■□□□□ 0.51
SRSF3-206ENST00000620242 EVC2Q86UK5 1308 aa18.23■□□□□ 0.51
SRSF3-206ENST00000620242 SBNO2Q9Y2G9 1366 aa18.23■□□□□ 0.51
SRSF3-206ENST00000620242 ESCO1Q5FWF5 840 aa18.23■□□□□ 0.51
SRSF3-206ENST00000620242 HIRIP3Q9BW71 556 aaPredicted RBP18.22■□□□□ 0.51
SRSF3-206ENST00000620242 NPHP3Q7Z494 1330 aa18.22■□□□□ 0.51
SRSF3-206ENST00000620242 FMN2Q9NZ56 1722 aa18.21■□□□□ 0.51
SRSF3-206ENST00000620242 HSPA1LP34931 641 aa18.21■□□□□ 0.51
SRSF3-206ENST00000620242 TULP4Q9NRJ4 1543 aa18.2■□□□□ 0.5
SRSF3-206ENST00000620242 CDK19Q9BWU1 502 aa18.19■□□□□ 0.5
SRSF3-206ENST00000620242 AHDC1Q5TGY3 1603 aaPredicted RBP18.19■□□□□ 0.5
SRSF3-206ENST00000620242 SRPK2P78362 688 aaKnown RBP18.18■□□□□ 0.5
SRSF3-206ENST00000620242 LRRC59Q96AG4 307 aaKnown RBP18.18■□□□□ 0.5
SRSF3-206ENST00000620242 PHF8Q9UPP1 1060 aa18.18■□□□□ 0.5
SRSF3-206ENST00000620242 CCDC61Q9Y6R9 512 aa18.18■□□□□ 0.5
SRSF3-206ENST00000620242 NUTM2FA1L443 756 aa18.17■□□□□ 0.5
SRSF3-206ENST00000620242 PUS7Q96PZ0 661 aaKnown RBP18.17■□□□□ 0.5
SRSF3-206ENST00000620242 ORAI2Q96SN7 254 aa18.17■□□□□ 0.5
SRSF3-206ENST00000620242 KIF1AQ12756 1690 aa18.17■□□□□ 0.5
SRSF3-206ENST00000620242 QRICH2Q9H0J4 1663 aa18.17■□□□□ 0.5
SRSF3-206ENST00000620242 USP47Q96K76 1375 aa18.17■□□□□ 0.5
SRSF3-206ENST00000620242 PSME1Q06323 249 aa18.16■□□□□ 0.5
SRSF3-206ENST00000620242 CDCA8Q53HL2 280 aa18.16■□□□□ 0.5
SRSF3-206ENST00000620242 NUDT16Q96DE0 195 aaKnown RBP18.16■□□□□ 0.5
SRSF3-206ENST00000620242 ATAD2Q6PL18 1390 aa18.15■□□□□ 0.5
SRSF3-206ENST00000620242 EIF4G2P78344 907 aaKnown RBP eCLIP18.14■□□□□ 0.49
SRSF3-206ENST00000620242 PHLPP1O60346 1717 aa18.14■□□□□ 0.49
SRSF3-206ENST00000620242 JCADQ9P266 1359 aa18.14■□□□□ 0.49
SRSF3-206ENST00000620242 ST20-MTHFSA0A0A6YYL1 179 aa18.13■□□□□ 0.49
SRSF3-206ENST00000620242 SOS2Q07890 1332 aaPredicted RBP18.13■□□□□ 0.49
SRSF3-206ENST00000620242 NHSL1Q5SYE7 1610 aa18.12■□□□□ 0.49
SRSF3-206ENST00000620242 ITSN1Q15811 1721 aa18.12■□□□□ 0.49
SRSF3-206ENST00000620242 FOXO3O43524 673 aa18.12■□□□□ 0.49
SRSF3-206ENST00000620242 TMF1P82094 1093 aa18.12■□□□□ 0.49
SRSF3-206ENST00000620242 NGDNQ8NEJ9 315 aaKnown RBP18.12■□□□□ 0.49
SRSF3-206ENST00000620242 ATP7BP35670 1465 aa18.11■□□□□ 0.49
SRSF3-206ENST00000620242 PLEKHG3A1L390 1219 aa18.1■□□□□ 0.49
SRSF3-206ENST00000620242 BRD4O60885 1362 aaPredicted RBP18.09■□□□□ 0.49
SRSF3-206ENST00000620242 SPATA31A6Q5VVP1 1343 aa18.09■□□□□ 0.49
SRSF3-206ENST00000620242 PRR36Q9H6K5 1346 aa18.09■□□□□ 0.49
SRSF3-206ENST00000620242 ZEB1P37275 1124 aaPredicted RBP18.09■□□□□ 0.49
SRSF3-206ENST00000620242 CABP2Q9NPB3 220 aa18.09■□□□□ 0.49
SRSF3-206ENST00000620242 DISP3Q9P2K9 1392 aa18.08■□□□□ 0.49
SRSF3-206ENST00000620242 NINLQ9Y2I6 1382 aa18.08■□□□□ 0.49
SRSF3-206ENST00000620242 KRT28Q7Z3Y7 464 aa18.08■□□□□ 0.48
SRSF3-206ENST00000620242 ZNF692Q9BU19 519 aaPredicted RBP18.08■□□□□ 0.48
SRSF3-206ENST00000620242 COL16A1Q07092 1604 aaPredicted RBP18.08■□□□□ 0.48
SRSF3-206ENST00000620242 SBNO1A3KN83 1393 aa18.07■□□□□ 0.48
SRSF3-206ENST00000620242 PMFBP1Q8TBY8 1022 aa18.07■□□□□ 0.48
SRSF3-206ENST00000620242 TESK2Q96S53 571 aa18.07■□□□□ 0.48
SRSF3-206ENST00000620242 USP32Q8NFA0 1604 aa18.07■□□□□ 0.48
SRSF3-206ENST00000620242 PPIP5K1Q6PFW1 1433 aa18.06■□□□□ 0.48
SRSF3-206ENST00000620242 ILDR2Q71H61 639 aa18.06■□□□□ 0.48
SRSF3-206ENST00000620242 POLR3AO14802 1390 aaPredicted RBP18.05■□□□□ 0.48
SRSF3-206ENST00000620242 ARHGEF10O15013 1369 aa18.05■□□□□ 0.48
SRSF3-206ENST00000620242 PXDNQ92626 1479 aa18.04■□□□□ 0.48
SRSF3-206ENST00000620242 RGPD8O14715 1765 aaPredicted RBP18.04■□□□□ 0.48
SRSF3-206ENST00000620242 ACEP12821 1306 aa18.03■□□□□ 0.48
SRSF3-206ENST00000620242 CABP1Q9NZU7 370 aa18.03■□□□□ 0.48
SRSF3-206ENST00000620242 SHPRHQ149N8 1683 aa18.03■□□□□ 0.48
SRSF3-206ENST00000620242 TOPAZ1Q8N9V7 1692 aa18.03■□□□□ 0.48
SRSF3-206ENST00000620242 SPATA31A3Q5VYP0 1347 aa18.02■□□□□ 0.48
SRSF3-206ENST00000620242 HDGFL2Q7Z4V5 671 aaPredicted RBP18.02■□□□□ 0.48
SRSF3-206ENST00000620242 DDX17Q92841 729 aaKnown RBP18.02■□□□□ 0.48
SRSF3-206ENST00000620242 TERF2IPQ9NYB0 399 aa18.02■□□□□ 0.48
SRSF3-206ENST00000620242 TNS3Q68CZ2 1445 aa18.01■□□□□ 0.47
SRSF3-206ENST00000620242 HSPA5P11021 654 aaKnown RBP18■□□□□ 0.47
SRSF3-206ENST00000620242 PNPLA6Q8IY17 1366 aa18■□□□□ 0.47
SRSF3-206ENST00000620242 SOCS7O14512 581 aa17.99■□□□□ 0.47
SRSF3-206ENST00000620242 XPCQ01831 940 aaPredicted RBP17.99■□□□□ 0.47
SRSF3-206ENST00000620242 TMC1Q8TDI8 760 aa17.99■□□□□ 0.47
SRSF3-206ENST00000620242 PAK3O75914 559 aaPredicted RBP17.98■□□□□ 0.47
SRSF3-206ENST00000620242 LMOD2Q6P5Q4 547 aa17.98■□□□□ 0.47
SRSF3-206ENST00000620242 HAP1P54257 671 aaPredicted RBP17.96■□□□□ 0.47
SRSF3-206ENST00000620242 MEX3CQ5U5Q3 659 aaKnown RBP17.96■□□□□ 0.47
SRSF3-206ENST00000620242 TTC21AQ8NDW8 1320 aa17.96■□□□□ 0.46
SRSF3-206ENST00000620242 PHF23Q9BUL5 403 aaPredicted RBP17.95■□□□□ 0.46
SRSF3-206ENST00000620242 USP6P35125 1406 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms