RNA–Protein interactions for RNA: ENST00000620175.4

SYN2-205, Transcript of synapsin II, humanhuman

TSL 1 (best) BASIC

Gene SYN2, Length 3,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN2-205ENST00000620175 ERBB4Q15303 1308 aa17.34■□□□□ 0.37
SYN2-205ENST00000620175 IQGAP2Q13576 1575 aa17.34■□□□□ 0.37
SYN2-205ENST00000620175 MAP7D2Q96T17 732 aa17.34■□□□□ 0.37
SYN2-205ENST00000620175 MVPQ14764 893 aaKnown RBP17.33■□□□□ 0.37
SYN2-205ENST00000620175 GDPD2Q9HCC8 539 aa17.33■□□□□ 0.37
SYN2-205ENST00000620175 RIPK4P57078 832 aa17.33■□□□□ 0.36
SYN2-205ENST00000620175 SLC12A5Q9H2X9 1139 aa17.33■□□□□ 0.36
SYN2-205ENST00000620175 LRPPRCP42704 1394 aaKnown RBP17.33■□□□□ 0.36
SYN2-205ENST00000620175 KIAA1107Q9UPP5 1409 aa17.32■□□□□ 0.36
SYN2-205ENST00000620175 SYAP1Q96A49 352 aaPredicted RBP17.32■□□□□ 0.36
SYN2-205ENST00000620175 KCNJ4P48050 445 aa17.31■□□□□ 0.36
SYN2-205ENST00000620175 DISP3Q9P2K9 1392 aa17.31■□□□□ 0.36
SYN2-205ENST00000620175 NUCB2P80303 420 aa17.3■□□□□ 0.36
SYN2-205ENST00000620175 CFAP70Q5T0N1 1121 aa17.3■□□□□ 0.36
SYN2-205ENST00000620175 TMEM57Q8N5G2 664 aa17.3■□□□□ 0.36
SYN2-205ENST00000620175 TRERF1Q96PN7 1200 aa17.3■□□□□ 0.36
SYN2-205ENST00000620175 PER1O15534 1290 aaPredicted RBP17.3■□□□□ 0.36
SYN2-205ENST00000620175 NEK4P51957 841 aa17.3■□□□□ 0.36
SYN2-205ENST00000620175 CCDC27Q2M243 656 aa17.3■□□□□ 0.36
SYN2-205ENST00000620175 CHAMP1Q96JM3 812 aa17.3■□□□□ 0.36
SYN2-205ENST00000620175 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.29■□□□□ 0.36
SYN2-205ENST00000620175 CCDC39Q9UFE4 941 aa17.29■□□□□ 0.36
SYN2-205ENST00000620175 NAP1L2Q9ULW6 460 aaPredicted RBP17.29■□□□□ 0.36
SYN2-205ENST00000620175 TNNT3P45378 269 aaPredicted RBP17.28■□□□□ 0.36
SYN2-205ENST00000620175 GGNBP2Q9H3C7 697 aa17.28■□□□□ 0.36
SYN2-205ENST00000620175 EIF3AQ14152 1382 aaKnown RBP17.28■□□□□ 0.36
SYN2-205ENST00000620175 BAG4O95429 457 aaKnown RBP17.28■□□□□ 0.36
SYN2-205ENST00000620175 TMEM132EQ6IEE7 984 aa17.28■□□□□ 0.36
SYN2-205ENST00000620175 WDR62O43379 1518 aa17.28■□□□□ 0.36
SYN2-205ENST00000620175 PRIM1P49642 420 aaKnown RBP17.27■□□□□ 0.36
SYN2-205ENST00000620175 ANO2Q9NQ90 1003 aa17.27■□□□□ 0.36
SYN2-205ENST00000620175 RAPGEF3O95398 923 aa17.27■□□□□ 0.36
SYN2-205ENST00000620175 HMOX1P09601 288 aa17.27■□□□□ 0.35
SYN2-205ENST00000620175 CGNQ9P2M7 1197 aaKnown RBP17.27■□□□□ 0.35
SYN2-205ENST00000620175 CHD1LQ86WJ1 897 aa17.26■□□□□ 0.35
SYN2-205ENST00000620175 BBXQ8WY36 941 aaPredicted RBP17.26■□□□□ 0.35
SYN2-205ENST00000620175 FBXW7Q969H0 707 aa17.26■□□□□ 0.35
SYN2-205ENST00000620175 EIF4G3O43432 1585 aaKnown RBP17.26■□□□□ 0.35
SYN2-205ENST00000620175 CUL7Q14999 1698 aa17.26■□□□□ 0.35
SYN2-205ENST00000620175 MCCP23508 829 aa17.26■□□□□ 0.35
SYN2-205ENST00000620175 SSH1Q8WYL5 1049 aa17.26■□□□□ 0.35
SYN2-205ENST00000620175 GAS2L2Q8NHY3 880 aa17.25■□□□□ 0.35
SYN2-205ENST00000620175 ISY1Q9ULR0 285 aaKnown RBP17.25■□□□□ 0.35
SYN2-205ENST00000620175 IFT57Q9NWB7 429 aa17.25■□□□□ 0.35
SYN2-205ENST00000620175 DAPK1P53355 1430 aa17.25■□□□□ 0.35
SYN2-205ENST00000620175 ATF7IPQ6VMQ6 1270 aa17.24■□□□□ 0.35
SYN2-205ENST00000620175 C17orf53Q8N3J3 647 aaPredicted RBP17.24■□□□□ 0.35
SYN2-205ENST00000620175 DTNBO60941 627 aa17.24■□□□□ 0.35
SYN2-205ENST00000620175 PPP4R3BQ5MIZ7 849 aa17.24■□□□□ 0.35
SYN2-205ENST00000620175 THUMPD2Q9BTF0 503 aaKnown RBP17.24■□□□□ 0.35
SYN2-205ENST00000620175 USP25Q9UHP3 1055 aa17.24■□□□□ 0.35
SYN2-205ENST00000620175 OFD1O75665 1012 aa17.23■□□□□ 0.35
SYN2-205ENST00000620175 ERICH4A6NGS2 130 aa17.23■□□□□ 0.35
SYN2-205ENST00000620175 LARP6Q9BRS8 491 aaKnown RBP17.23■□□□□ 0.35
SYN2-205ENST00000620175 EPRSP07814 1512 aaKnown RBP17.23■□□□□ 0.35
SYN2-205ENST00000620175 FIBPO43427 364 aa17.23■□□□□ 0.35
SYN2-205ENST00000620175 TRIM27P14373 513 aa17.23■□□□□ 0.35
SYN2-205ENST00000620175 CHMP4BQ9H444 224 aaKnown RBP17.23■□□□□ 0.35
SYN2-205ENST00000620175 NKTRP30414 1462 aaKnown RBP17.23■□□□□ 0.35
SYN2-205ENST00000620175 CDC45O75419 566 aa17.22■□□□□ 0.35
SYN2-205ENST00000620175 ZSCAN23Q3MJ62 389 aa17.22■□□□□ 0.35
SYN2-205ENST00000620175 ANTXR1Q9H6X2 564 aa17.22■□□□□ 0.35
SYN2-205ENST00000620175 USP19O94966 1318 aa17.22■□□□□ 0.35
SYN2-205ENST00000620175 EFCAB5A4FU69 1503 aa17.22■□□□□ 0.35
SYN2-205ENST00000620175 OS9Q13438 667 aaPredicted RBP17.22■□□□□ 0.35
SYN2-205ENST00000620175 NECTIN2Q92692 538 aa17.22■□□□□ 0.35
SYN2-205ENST00000620175 KIF16BQ96L93 1317 aa17.22■□□□□ 0.35
SYN2-205ENST00000620175 TTC12Q9H892 705 aaPredicted RBP17.22■□□□□ 0.35
SYN2-205ENST00000620175 ERBINQ96RT1 1412 aa17.21■□□□□ 0.35
SYN2-205ENST00000620175 ZRSR1Q15695 479 aaKnown RBP17.21■□□□□ 0.35
SYN2-205ENST00000620175 PLCD3Q8N3E9 789 aa17.21■□□□□ 0.35
SYN2-205ENST00000620175 TSPY26PQ9H489 355 aa17.21■□□□□ 0.35
SYN2-205ENST00000620175 PARD3Q8TEW0 1356 aa17.21■□□□□ 0.35
SYN2-205ENST00000620175 MTERF4Q7Z6M4 381 aaKnown RBP17.21■□□□□ 0.34
SYN2-205ENST00000620175 ABCC5O15440 1437 aa17.2■□□□□ 0.34
SYN2-205ENST00000620175 FSD2A1L4K1 749 aa17.2■□□□□ 0.34
SYN2-205ENST00000620175 FGD1P98174 961 aa17.2■□□□□ 0.34
SYN2-205ENST00000620175 UPF3BQ9BZI7 483 aaKnown RBP17.2■□□□□ 0.34
SYN2-205ENST00000620175 RBSNQ9H1K0 784 aa17.2■□□□□ 0.34
SYN2-205ENST00000620175 JARID2Q92833 1246 aaPredicted RBP17.2■□□□□ 0.34
SYN2-205ENST00000620175 CIZ1Q9ULV3 898 aaPredicted RBP17.2■□□□□ 0.34
SYN2-205ENST00000620175 VPS37CA5D8V6 355 aaPredicted RBP17.19■□□□□ 0.34
SYN2-205ENST00000620175 VGLL3A8MV65 326 aa17.19■□□□□ 0.34
SYN2-205ENST00000620175 KIF3AQ9Y496 699 aa17.19■□□□□ 0.34
SYN2-205ENST00000620175 PHF14O94880 888 aa17.19■□□□□ 0.34
SYN2-205ENST00000620175 TBC1D9Q6ZT07 1266 aa17.19■□□□□ 0.34
SYN2-205ENST00000620175 PDCL2Q8N4E4 241 aa17.19■□□□□ 0.34
SYN2-205ENST00000620175 SASS6Q6UVJ0 657 aa17.19■□□□□ 0.34
SYN2-205ENST00000620175 SMARCA5O60264 1052 aaPredicted RBP17.18■□□□□ 0.34
SYN2-205ENST00000620175 SPATA31E1Q6ZUB1 1445 aa17.18■□□□□ 0.34
SYN2-205ENST00000620175 TROQ12816 1431 aaPredicted RBP17.17■□□□□ 0.34
SYN2-205ENST00000620175 KLHL40Q2TBA0 621 aa17.17■□□□□ 0.34
SYN2-205ENST00000620175 ZGPATQ8N5A5 531 aaKnown RBP17.17■□□□□ 0.34
SYN2-205ENST00000620175 INTS3Q68E01 1043 aaKnown RBP17.16■□□□□ 0.34
SYN2-205ENST00000620175 CABP2Q9NPB3 220 aa17.16■□□□□ 0.34
SYN2-205ENST00000620175 ARHGEF11O15085 1522 aa17.16■□□□□ 0.34
SYN2-205ENST00000620175 ZBTB9Q96C00 473 aa17.16■□□□□ 0.34
SYN2-205ENST00000620175 REC8O95072 547 aa17.16■□□□□ 0.34
SYN2-205ENST00000620175 GOLGA6L6A8MZA4 724 aa17.15■□□□□ 0.34
SYN2-205ENST00000620175 RABEP1Q15276 862 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms