RNA–Protein interactions for RNA: ENST00000620021.4

TMCO3-210, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 4

Gene TMCO3, Length 3,542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-210ENST00000620021 B4GALNT3Q6L9W6 998 aa17.42■□□□□ 0.38
TMCO3-210ENST00000620021 RIMS2Q9UQ26 1411 aa17.41■□□□□ 0.38
TMCO3-210ENST00000620021 ANP32EQ9BTT0 268 aa17.41■□□□□ 0.38
TMCO3-210ENST00000620021 YTHDC2Q9H6S0 1430 aaKnown RBP17.41■□□□□ 0.38
TMCO3-210ENST00000620021 REREQ9P2R6 1566 aa17.4■□□□□ 0.38
TMCO3-210ENST00000620021 TXNDC2Q86VQ3 553 aa17.4■□□□□ 0.38
TMCO3-210ENST00000620021 ZFYVE9O95405 1425 aa17.4■□□□□ 0.38
TMCO3-210ENST00000620021 TULP4Q9NRJ4 1543 aa17.39■□□□□ 0.38
TMCO3-210ENST00000620021 MYO3AQ8NEV4 1616 aa17.39■□□□□ 0.38
TMCO3-210ENST00000620021 PLEKHH1Q9ULM0 1364 aa17.39■□□□□ 0.37
TMCO3-210ENST00000620021 CDK19Q9BWU1 502 aa17.38■□□□□ 0.37
TMCO3-210ENST00000620021 ARHGEF28Q8N1W1 1705 aaKnown RBP17.38■□□□□ 0.37
TMCO3-210ENST00000620021 ALKQ9UM73 1620 aa17.37■□□□□ 0.37
TMCO3-210ENST00000620021 GGNBP2Q9H3C7 697 aa17.37■□□□□ 0.37
TMCO3-210ENST00000620021 CABP1Q9NZU7 370 aa17.36■□□□□ 0.37
TMCO3-210ENST00000620021 SPATA31D1Q6ZQQ2 1576 aa17.36■□□□□ 0.37
TMCO3-210ENST00000620021 METP08581 1390 aa17.36■□□□□ 0.37
TMCO3-210ENST00000620021 TNRQ92752 1358 aa17.36■□□□□ 0.37
TMCO3-210ENST00000620021 TSHZ2Q9NRE2 1034 aa17.35■□□□□ 0.37
TMCO3-210ENST00000620021 PTPRMP28827 1452 aa17.35■□□□□ 0.37
TMCO3-210ENST00000620021 APAF1O14727 1248 aa17.35■□□□□ 0.37
TMCO3-210ENST00000620021 NCKAP5LQ9HCH0 1330 aa17.35■□□□□ 0.37
TMCO3-210ENST00000620021 FBLN1P23142 703 aa17.34■□□□□ 0.37
TMCO3-210ENST00000620021 MTHFSP49914 203 aa17.34■□□□□ 0.37
TMCO3-210ENST00000620021 NEUROD2Q15784 382 aa17.34■□□□□ 0.37
TMCO3-210ENST00000620021 NPC1L1Q9UHC9 1359 aa17.34■□□□□ 0.37
TMCO3-210ENST00000620021 CGNL1Q0VF96 1302 aa17.34■□□□□ 0.37
TMCO3-210ENST00000620021 NUTM2FA1L443 756 aa17.34■□□□□ 0.37
TMCO3-210ENST00000620021 SLC26A8Q96RN1 970 aa17.34■□□□□ 0.37
TMCO3-210ENST00000620021 LTKP29376 864 aa17.33■□□□□ 0.37
TMCO3-210ENST00000620021 A0A1W2PP64 1363 aa17.33■□□□□ 0.36
TMCO3-210ENST00000620021 PLIN1O60240 522 aa17.33■□□□□ 0.36
TMCO3-210ENST00000620021 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.33■□□□□ 0.36
TMCO3-210ENST00000620021 BLMP54132 1417 aaPredicted RBP17.32■□□□□ 0.36
TMCO3-210ENST00000620021 ANO8Q9HCE9 1232 aaPredicted RBP17.32■□□□□ 0.36
TMCO3-210ENST00000620021 RCAN3Q9UKA8 241 aa17.32■□□□□ 0.36
TMCO3-210ENST00000620021 PPP4R2Q9NY27 417 aa17.31■□□□□ 0.36
TMCO3-210ENST00000620021 RRP7AQ9Y3A4 280 aaKnown RBP17.31■□□□□ 0.36
TMCO3-210ENST00000620021 ANKRD36BQ8N2N9 1353 aa17.3■□□□□ 0.36
TMCO3-210ENST00000620021 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.29■□□□□ 0.36
TMCO3-210ENST00000620021 SPINK5Q9NQ38 1064 aaPredicted RBP17.29■□□□□ 0.36
TMCO3-210ENST00000620021 DMRT2Q9Y5R5 561 aa17.28■□□□□ 0.36
TMCO3-210ENST00000620021 FYB1O15117 783 aa17.27■□□□□ 0.36
TMCO3-210ENST00000620021 TERF2IPQ9NYB0 399 aa17.26■□□□□ 0.35
TMCO3-210ENST00000620021 TMEM2Q9UHN6 1383 aa17.26■□□□□ 0.35
TMCO3-210ENST00000620021 PPM1GO15355 546 aaPredicted RBP17.26■□□□□ 0.35
TMCO3-210ENST00000620021 PDE3BQ13370 1112 aa17.26■□□□□ 0.35
TMCO3-210ENST00000620021 RRP1P56182 461 aaKnown RBP17.25■□□□□ 0.35
TMCO3-210ENST00000620021 RNF123Q5XPI4 1314 aa17.25■□□□□ 0.35
TMCO3-210ENST00000620021 HDGFP51858 240 aaKnown RBP17.24■□□□□ 0.35
TMCO3-210ENST00000620021 HDGFL2Q7Z4V5 671 aaPredicted RBP17.24■□□□□ 0.35
TMCO3-210ENST00000620021 EXOC6Q8TAG9 804 aa17.24■□□□□ 0.35
TMCO3-210ENST00000620021 PUS7Q96PZ0 661 aaKnown RBP17.24■□□□□ 0.35
TMCO3-210ENST00000620021 ZRANB1Q9UGI0 708 aa17.24■□□□□ 0.35
TMCO3-210ENST00000620021 ATAD2Q6PL18 1390 aa17.23■□□□□ 0.35
TMCO3-210ENST00000620021 GOLGA2Q08379 1002 aa17.23■□□□□ 0.35
TMCO3-210ENST00000620021 U2AF1L5P0DN76 240 aaPredicted RBP17.23■□□□□ 0.35
TMCO3-210ENST00000620021 U2AF1Q01081 240 aaKnown RBP eCLIP17.23■□□□□ 0.35
TMCO3-210ENST00000620021 U2SURPO15042 1029 aaKnown RBP17.22■□□□□ 0.35
TMCO3-210ENST00000620021 ABCC11Q96J66 1382 aa17.22■□□□□ 0.35
TMCO3-210ENST00000620021 WASLO00401 505 aaPredicted RBP17.22■□□□□ 0.35
TMCO3-210ENST00000620021 DUSP27Q5VZP5 1158 aa17.22■□□□□ 0.35
TMCO3-210ENST00000620021 CCDC136Q96JN2 1154 aa17.22■□□□□ 0.35
TMCO3-210ENST00000620021 CD163L1Q9NR16 1453 aa17.21■□□□□ 0.35
TMCO3-210ENST00000620021 NRXN3Q9Y4C0 1643 aa17.21■□□□□ 0.35
TMCO3-210ENST00000620021 POLR3AO14802 1390 aaPredicted RBP17.21■□□□□ 0.35
TMCO3-210ENST00000620021 NUDT16Q96DE0 195 aaKnown RBP17.2■□□□□ 0.34
TMCO3-210ENST00000620021 ROBO2Q9HCK4 1378 aa17.2■□□□□ 0.34
TMCO3-210ENST00000620021 C20orf194Q5TEA3 1177 aa17.2■□□□□ 0.34
TMCO3-210ENST00000620021 CFAP53Q96M91 514 aa17.2■□□□□ 0.34
TMCO3-210ENST00000620021 ZNF521Q96K83 1311 aa17.19■□□□□ 0.34
TMCO3-210ENST00000620021 ERICH6BQ5W0A0 696 aa17.19■□□□□ 0.34
TMCO3-210ENST00000620021 EID1Q9Y6B2 187 aa17.19■□□□□ 0.34
TMCO3-210ENST00000620021 TCP11L2Q8N4U5 519 aa17.19■□□□□ 0.34
TMCO3-210ENST00000620021 NME9Q86XW9 330 aa17.18■□□□□ 0.34
TMCO3-210ENST00000620021 RBM33Q96EV2 1170 aaKnown RBP17.17■□□□□ 0.34
TMCO3-210ENST00000620021 SETD1AO15047 1707 aaKnown RBP17.17■□□□□ 0.34
TMCO3-210ENST00000620021 SLFN5Q08AF3 891 aa17.17■□□□□ 0.34
TMCO3-210ENST00000620021 UBR1Q8IWV7 1749 aa17.17■□□□□ 0.34
TMCO3-210ENST00000620021 ADAMTS13Q76LX8 1427 aa17.16■□□□□ 0.34
TMCO3-210ENST00000620021 INSRP06213 1382 aa17.16■□□□□ 0.34
TMCO3-210ENST00000620021 WWC1Q8IX03 1113 aa17.16■□□□□ 0.34
TMCO3-210ENST00000620021 PRR36Q9H6K5 1346 aa17.16■□□□□ 0.34
TMCO3-210ENST00000620021 PPIP5K1Q6PFW1 1433 aa17.15■□□□□ 0.34
TMCO3-210ENST00000620021 AMOTL2Q9Y2J4 779 aa17.15■□□□□ 0.34
TMCO3-210ENST00000620021 RUNDC1Q96C34 613 aa17.14■□□□□ 0.34
TMCO3-210ENST00000620021 PODXL2Q9NZ53 605 aa17.14■□□□□ 0.34
TMCO3-210ENST00000620021 SOX12O15370 315 aa17.14■□□□□ 0.33
TMCO3-210ENST00000620021 CCDC61Q9Y6R9 512 aa17.14■□□□□ 0.33
TMCO3-210ENST00000620021 NINLQ9Y2I6 1382 aa17.14■□□□□ 0.33
TMCO3-210ENST00000620021 C3P01024 1663 aa17.13■□□□□ 0.33
TMCO3-210ENST00000620021 CRBNQ96SW2 442 aa17.13■□□□□ 0.33
TMCO3-210ENST00000620021 BCAR3O75815 825 aa17.13■□□□□ 0.33
TMCO3-210ENST00000620021 THEMISQ8N1K5 641 aaPredicted RBP17.12■□□□□ 0.33
TMCO3-210ENST00000620021 EMILIN1Q9Y6C2 1016 aa17.12■□□□□ 0.33
TMCO3-210ENST00000620021 PMFBP1Q8TBY8 1022 aa17.12■□□□□ 0.33
TMCO3-210ENST00000620021 RBM19Q9Y4C8 960 aaKnown RBP17.12■□□□□ 0.33
TMCO3-210ENST00000620021 RRS1Q15050 365 aaKnown RBP17.12■□□□□ 0.33
TMCO3-210ENST00000620021 NSD2O96028 1365 aa17.12■□□□□ 0.33
TMCO3-210ENST00000620021 PTPRUQ92729 1446 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms