RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 ABCC1P33527 1531 aa4.22□□□□□ -1.73
LPP-220ENST00000617246 EVC2Q86UK5 1308 aa4.22□□□□□ -1.73
LPP-220ENST00000617246 MPHOSPH10O00566 681 aaKnown RBP4.22□□□□□ -1.73
LPP-220ENST00000617246 COG3Q96JB2 828 aa4.22□□□□□ -1.73
LPP-220ENST00000617246 DNAJC5Q9H3Z4 198 aa4.22□□□□□ -1.73
LPP-220ENST00000617246 UNC13BO14795 1591 aa4.22□□□□□ -1.73
LPP-220ENST00000617246 CDC42BPAQ5VT25 1732 aa4.22□□□□□ -1.73
LPP-220ENST00000617246 CDC42BPBQ9Y5S2 1711 aa4.22□□□□□ -1.73
LPP-220ENST00000617246 SYCP2Q9BX26 1530 aa4.22□□□□□ -1.73
LPP-220ENST00000617246 PAF1Q8N7H5 531 aa4.22□□□□□ -1.73
LPP-220ENST00000617246 CPS1P31327 1500 aa4.22□□□□□ -1.73
LPP-220ENST00000617246 TSPYL2Q9H2G4 693 aaPredicted RBP4.22□□□□□ -1.73
LPP-220ENST00000617246 GOLGA6L6A8MZA4 724 aa4.22□□□□□ -1.73
LPP-220ENST00000617246 TATP17735 454 aaPredicted RBP4.22□□□□□ -1.73
LPP-220ENST00000617246 QRICH2Q9H0J4 1663 aa4.21□□□□□ -1.73
LPP-220ENST00000617246 ASXL2Q76L83 1435 aa4.21□□□□□ -1.73
LPP-220ENST00000617246 CEP89Q96ST8 783 aa4.21□□□□□ -1.74
LPP-220ENST00000617246 LPXNO60711 386 aa4.21□□□□□ -1.74
LPP-220ENST00000617246 OTUD7BQ6GQQ9 843 aa4.21□□□□□ -1.74
LPP-220ENST00000617246 MIER1Q8N108 512 aa4.21□□□□□ -1.74
LPP-220ENST00000617246 ESCO1Q5FWF5 840 aa4.21□□□□□ -1.74
LPP-220ENST00000617246 DRC1Q96MC2 740 aa4.21□□□□□ -1.74
LPP-220ENST00000617246 APBB1O00213 710 aa4.21□□□□□ -1.74
LPP-220ENST00000617246 TXNDC2Q86VQ3 553 aa4.21□□□□□ -1.74
LPP-220ENST00000617246 MARCH6O60337 910 aa4.21□□□□□ -1.74
LPP-220ENST00000617246 NPHP3Q7Z494 1330 aa4.21□□□□□ -1.74
LPP-220ENST00000617246 DDX58O95786 925 aaKnown RBP4.21□□□□□ -1.74
LPP-220ENST00000617246 STK26Q9P289 416 aa4.21□□□□□ -1.74
LPP-220ENST00000617246 CCDC7Q96M83 1385 aa4.2□□□□□ -1.74
LPP-220ENST00000617246 ARHGEF40Q8TER5 1519 aa4.2□□□□□ -1.74
LPP-220ENST00000617246 DIP2BQ9P265 1576 aa4.2□□□□□ -1.74
LPP-220ENST00000617246 TNRQ92752 1358 aa4.2□□□□□ -1.74
LPP-220ENST00000617246 FTSJ3Q8IY81 847 aaKnown RBP4.2□□□□□ -1.74
LPP-220ENST00000617246 MAPKBP1O60336 1514 aa4.2□□□□□ -1.74
LPP-220ENST00000617246 MADDQ8WXG6 1647 aa4.2□□□□□ -1.74
LPP-220ENST00000617246 ATP10BO94823 1461 aa4.2□□□□□ -1.74
LPP-220ENST00000617246 VWDEQ8N2E2 1590 aa4.2□□□□□ -1.74
LPP-220ENST00000617246 MAGI2Q86UL8 1455 aa4.2□□□□□ -1.74
LPP-220ENST00000617246 URB2Q14146 1524 aaKnown RBP4.2□□□□□ -1.74
LPP-220ENST00000617246 MCCP23508 829 aa4.2□□□□□ -1.74
LPP-220ENST00000617246 GRM1Q13255 1194 aa4.2□□□□□ -1.74
LPP-220ENST00000617246 TCIRG1Q13488 830 aa4.2□□□□□ -1.74
LPP-220ENST00000617246 DIEXFQ68CQ4 756 aaKnown RBP4.2□□□□□ -1.74
LPP-220ENST00000617246 HOOK2Q96ED9 719 aa4.2□□□□□ -1.74
LPP-220ENST00000617246 RAD21O60216 631 aa4.2□□□□□ -1.74
LPP-220ENST00000617246 ZPR1O75312 459 aa4.2□□□□□ -1.74
LPP-220ENST00000617246 DESP17661 470 aa4.2□□□□□ -1.74
LPP-220ENST00000617246 BMS1Q14692 1282 aaKnown RBP4.2□□□□□ -1.74
LPP-220ENST00000617246 DIP2AQ14689 1571 aa4.2□□□□□ -1.74
LPP-220ENST00000617246 FBXO41Q8TF61 875 aa4.2□□□□□ -1.74
LPP-220ENST00000617246 CHMP4CQ96CF2 233 aa4.2□□□□□ -1.74
LPP-220ENST00000617246 ADRA2BP18089 450 aa4.19□□□□□ -1.74
LPP-220ENST00000617246 SOGA3Q5TF21 947 aa4.19□□□□□ -1.74
LPP-220ENST00000617246 DPY19L2Q6NUT2 758 aa4.19□□□□□ -1.74
LPP-220ENST00000617246 MYO3AQ8NEV4 1616 aa4.19□□□□□ -1.74
LPP-220ENST00000617246 BCORL1Q5H9F3 1711 aa4.19□□□□□ -1.74
LPP-220ENST00000617246 NLRP13Q86W25 1043 aa4.19□□□□□ -1.74
LPP-220ENST00000617246 C8orf37Q96NL8 207 aa4.19□□□□□ -1.74
LPP-220ENST00000617246 CCDC174Q6PII3 467 aa4.19□□□□□ -1.74
LPP-220ENST00000617246 A0A087WZG4 1122 aa4.19□□□□□ -1.74
LPP-220ENST00000617246 TMEM132AQ24JP5 1023 aa4.19□□□□□ -1.74
LPP-220ENST00000617246 LRRC59Q96AG4 307 aaKnown RBP4.19□□□□□ -1.74
LPP-220ENST00000617246 UHRF1BP1LA0JNW5 1464 aa4.19□□□□□ -1.74
LPP-220ENST00000617246 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.19□□□□□ -1.74
LPP-220ENST00000617246 LAS1LQ9Y4W2 734 aaKnown RBP4.19□□□□□ -1.74
LPP-220ENST00000617246 INO80Q9ULG1 1556 aaPredicted RBP4.19□□□□□ -1.74
LPP-220ENST00000617246 FLAD1Q8NFF5 587 aa4.19□□□□□ -1.74
LPP-220ENST00000617246 CDCA7Q9BWT1 371 aaPredicted RBP4.19□□□□□ -1.74
LPP-220ENST00000617246 RGPD1P0DJD0 1748 aa4.19□□□□□ -1.74
LPP-220ENST00000617246 RXRBP28702 533 aa4.19□□□□□ -1.74
LPP-220ENST00000617246 DHX37Q8IY37 1157 aaKnown RBP4.19□□□□□ -1.74
LPP-220ENST00000617246 CCDC87Q9NVE4 849 aa4.19□□□□□ -1.74
LPP-220ENST00000617246 HDAC9Q9UKV0 1011 aa4.19□□□□□ -1.74
LPP-220ENST00000617246 A2ML1A8K2U0 1454 aa4.19□□□□□ -1.74
LPP-220ENST00000617246 U2SURPO15042 1029 aaKnown RBP4.18□□□□□ -1.74
LPP-220ENST00000617246 KDM5BQ9UGL1 1544 aa4.18□□□□□ -1.74
LPP-220ENST00000617246 SPG7Q9UQ90 795 aa4.18□□□□□ -1.74
LPP-220ENST00000617246 PLXNC1O60486 1568 aa4.18□□□□□ -1.74
LPP-220ENST00000617246 NRDCO43847 1150 aa4.18□□□□□ -1.74
LPP-220ENST00000617246 CA8P35219 290 aa4.18□□□□□ -1.74
LPP-220ENST00000617246 BRD4O60885 1362 aaPredicted RBP4.18□□□□□ -1.74
LPP-220ENST00000617246 TIAM1Q13009 1591 aa4.18□□□□□ -1.74
LPP-220ENST00000617246 GIGYF1O75420 1035 aaPredicted RBP4.18□□□□□ -1.74
LPP-220ENST00000617246 ELMSAN1Q6PJG2 1045 aa4.18□□□□□ -1.74
LPP-220ENST00000617246 CARD11Q9BXL7 1154 aa4.18□□□□□ -1.74
LPP-220ENST00000617246 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.18□□□□□ -1.74
LPP-220ENST00000617246 RTL5Q5HYW3 569 aaPredicted RBP4.18□□□□□ -1.74
LPP-220ENST00000617246 SAMD9Q5K651 1589 aa4.18□□□□□ -1.74
LPP-220ENST00000617246 EIF6P56537 245 aaKnown RBP4.18□□□□□ -1.74
LPP-220ENST00000617246 KCNH5Q8NCM2 988 aa4.18□□□□□ -1.74
LPP-220ENST00000617246 TARBP1Q13395 1621 aaKnown RBP4.17□□□□□ -1.74
LPP-220ENST00000617246 CDK13Q14004 1512 aaKnown RBP4.17□□□□□ -1.74
LPP-220ENST00000617246 MAPK8IP2Q13387 824 aaPredicted RBP4.17□□□□□ -1.74
LPP-220ENST00000617246 ATP10AO60312 1499 aa4.17□□□□□ -1.74
LPP-220ENST00000617246 SLF2Q8IX21 1173 aa4.17□□□□□ -1.74
LPP-220ENST00000617246 NUP155O75694 1391 aa4.17□□□□□ -1.74
LPP-220ENST00000617246 RGL3Q3MIN7 710 aa4.17□□□□□ -1.74
LPP-220ENST00000617246 CEP170BQ9Y4F5 1589 aaPredicted RBP4.17□□□□□ -1.74
LPP-220ENST00000617246 ARHGEF10O15013 1369 aa4.17□□□□□ -1.74
LPP-220ENST00000617246 TNNI2P48788 182 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms