RNA–Protein interactions for RNA: ENST00000614895.4

PCDH15-227, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCDH15, Length 9,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-227ENST00000614895 NBPF8Q3BBV2 869 aa6.36□□□□□ -1.39
PCDH15-227ENST00000614895 CCDC27Q2M243 656 aa6.36□□□□□ -1.39
PCDH15-227ENST00000614895 ERCC4Q92889 916 aaPredicted RBP6.36□□□□□ -1.39
PCDH15-227ENST00000614895 DEF6Q9H4E7 631 aa6.36□□□□□ -1.39
PCDH15-227ENST00000614895 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.36□□□□□ -1.39
PCDH15-227ENST00000614895 SYCE3A1L190 88 aa6.35□□□□□ -1.39
PCDH15-227ENST00000614895 C20orf194Q5TEA3 1177 aa6.35□□□□□ -1.39
PCDH15-227ENST00000614895 API5Q9BZZ5 524 aaKnown RBP6.35□□□□□ -1.39
PCDH15-227ENST00000614895 TPM1P09493 284 aa6.35□□□□□ -1.39
PCDH15-227ENST00000614895 NBPF1Q3BBV0 1214 aa6.35□□□□□ -1.39
PCDH15-227ENST00000614895 RNF20Q5VTR2 975 aa6.35□□□□□ -1.39
PCDH15-227ENST00000614895 KANK1Q14678 1352 aa6.35□□□□□ -1.39
PCDH15-227ENST00000614895 PRIMPOLQ96LW4 560 aa6.35□□□□□ -1.39
PCDH15-227ENST00000614895 FGD6Q6ZV73 1430 aa6.35□□□□□ -1.39
PCDH15-227ENST00000614895 H0YHG0 523 aa6.35□□□□□ -1.39
PCDH15-227ENST00000614895 OFD1O75665 1012 aa6.35□□□□□ -1.39
PCDH15-227ENST00000614895 PPP2R1AP30153 589 aa6.35□□□□□ -1.39
PCDH15-227ENST00000614895 FBXW7Q969H0 707 aa6.35□□□□□ -1.39
PCDH15-227ENST00000614895 NEK4P51957 841 aa6.35□□□□□ -1.39
PCDH15-227ENST00000614895 GCC1Q96CN9 775 aa6.35□□□□□ -1.39
PCDH15-227ENST00000614895 CCDC94Q9BW85 323 aaPredicted RBP6.35□□□□□ -1.39
PCDH15-227ENST00000614895 TIGD1Q96MW7 591 aa6.35□□□□□ -1.39
PCDH15-227ENST00000614895 TRERF1Q96PN7 1200 aa6.35□□□□□ -1.39
PCDH15-227ENST00000614895 TSR1Q2NL82 804 aaKnown RBP6.34□□□□□ -1.39
PCDH15-227ENST00000614895 DNAJC2Q99543 621 aaKnown RBP6.34□□□□□ -1.39
PCDH15-227ENST00000614895 CCP110O43303 1012 aa6.34□□□□□ -1.39
PCDH15-227ENST00000614895 CCDC192P0DO97 292 aa6.34□□□□□ -1.39
PCDH15-227ENST00000614895 SSR1P43307 286 aaKnown RBP6.34□□□□□ -1.39
PCDH15-227ENST00000614895 RUFY2Q8WXA3 655 aa6.34□□□□□ -1.39
PCDH15-227ENST00000614895 PPP1R1BQ9UD71 204 aaPredicted RBP6.34□□□□□ -1.39
PCDH15-227ENST00000614895 SSFA2P28290 1259 aa6.34□□□□□ -1.39
PCDH15-227ENST00000614895 CHMP4CQ96CF2 233 aa6.34□□□□□ -1.4
PCDH15-227ENST00000614895 NAT10Q9H0A0 1025 aaKnown RBP6.34□□□□□ -1.4
PCDH15-227ENST00000614895 RUFY1Q96T51 708 aa6.33□□□□□ -1.4
PCDH15-227ENST00000614895 SLFN5Q08AF3 891 aa6.33□□□□□ -1.4
PCDH15-227ENST00000614895 PDIA4P13667 645 aaKnown RBP6.33□□□□□ -1.4
PCDH15-227ENST00000614895 ZKSCAN1P17029 563 aaPredicted RBP6.33□□□□□ -1.4
PCDH15-227ENST00000614895 RIPK4P57078 832 aa6.33□□□□□ -1.4
PCDH15-227ENST00000614895 CCDC73Q6ZRK6 1079 aa6.33□□□□□ -1.4
PCDH15-227ENST00000614895 TMX4Q9H1E5 349 aaPredicted RBP6.33□□□□□ -1.4
PCDH15-227ENST00000614895 WDR33Q9C0J8 1336 aaKnown RBP6.33□□□□□ -1.4
PCDH15-227ENST00000614895 CCDC144AA2RUR9 1427 aa6.33□□□□□ -1.4
PCDH15-227ENST00000614895 STK26Q9P289 416 aa6.33□□□□□ -1.4
PCDH15-227ENST00000614895 ROCK1Q13464 1354 aa6.33□□□□□ -1.4
PCDH15-227ENST00000614895 FIBPO43427 364 aa6.32□□□□□ -1.4
PCDH15-227ENST00000614895 USP8P40818 1118 aa6.32□□□□□ -1.4
PCDH15-227ENST00000614895 MVPQ14764 893 aaKnown RBP6.32□□□□□ -1.4
PCDH15-227ENST00000614895 TBC1D32Q96NH3 1257 aa6.32□□□□□ -1.4
PCDH15-227ENST00000614895 C8orf34Q49A92 452 aa6.32□□□□□ -1.4
PCDH15-227ENST00000614895 CHD1LQ86WJ1 897 aa6.32□□□□□ -1.4
PCDH15-227ENST00000614895 SPAG9O60271 1321 aaKnown RBP6.32□□□□□ -1.4
PCDH15-227ENST00000614895 HNRNPMP52272 730 aaKnown RBP eCLIP6.32□□□□□ -1.4
PCDH15-227ENST00000614895 IRX3P78415 501 aaPredicted RBP6.32□□□□□ -1.4
PCDH15-227ENST00000614895 NOL10Q9BSC4 688 aaKnown RBP6.32□□□□□ -1.4
PCDH15-227ENST00000614895 CHMP4AQ9BY43 222 aa6.32□□□□□ -1.4
PCDH15-227ENST00000614895 CLGNO14967 610 aa6.32□□□□□ -1.4
PCDH15-227ENST00000614895 SMC2O95347 1197 aa6.32□□□□□ -1.4
PCDH15-227ENST00000614895 TMCO3Q6UWJ1 677 aa6.32□□□□□ -1.4
PCDH15-227ENST00000614895 GPATCH11Q8N954 259 aa6.32□□□□□ -1.4
PCDH15-227ENST00000614895 KLHL40Q2TBA0 621 aa6.31□□□□□ -1.4
PCDH15-227ENST00000614895 HDAC5Q9UQL6 1122 aa6.31□□□□□ -1.4
PCDH15-227ENST00000614895 ARAP1Q96P48 1450 aa6.31□□□□□ -1.4
PCDH15-227ENST00000614895 PES1O00541 588 aaKnown RBP6.31□□□□□ -1.4
PCDH15-227ENST00000614895 SOX12O15370 315 aa6.31□□□□□ -1.4
PCDH15-227ENST00000614895 CLSTN1O94985 981 aa6.31□□□□□ -1.4
PCDH15-227ENST00000614895 PDILTQ8N807 584 aa6.31□□□□□ -1.4
PCDH15-227ENST00000614895 TERF2IPQ9NYB0 399 aa6.31□□□□□ -1.4
PCDH15-227ENST00000614895 NOB1Q9ULX3 412 aaKnown RBP6.31□□□□□ -1.4
PCDH15-227ENST00000614895 ZKSCAN5Q9Y2L8 839 aa6.31□□□□□ -1.4
PCDH15-227ENST00000614895 EIF3JO75822 258 aaKnown RBP6.31□□□□□ -1.4
PCDH15-227ENST00000614895 TNNT1P13805 278 aa6.31□□□□□ -1.4
PCDH15-227ENST00000614895 SKIDA1Q1XH10 827 aa6.31□□□□□ -1.4
PCDH15-227ENST00000614895 BRD2P25440 801 aaKnown RBP6.31□□□□□ -1.4
PCDH15-227ENST00000614895 ZSCAN23Q3MJ62 389 aa6.31□□□□□ -1.4
PCDH15-227ENST00000614895 BAG4O95429 457 aaKnown RBP6.31□□□□□ -1.4
PCDH15-227ENST00000614895 EXOSC9Q06265 439 aaKnown RBP6.31□□□□□ -1.4
PCDH15-227ENST00000614895 HSP90AB3PQ58FF7 597 aa6.31□□□□□ -1.4
PCDH15-227ENST00000614895 TNMDQ9H2S6 317 aa6.31□□□□□ -1.4
PCDH15-227ENST00000614895 GTF2F1P35269 517 aaKnown RBP eCLIP6.31□□□□□ -1.4
PCDH15-227ENST00000614895 DHX8Q14562 1220 aaKnown RBP6.31□□□□□ -1.4
PCDH15-227ENST00000614895 ERC2O15083 957 aa6.31□□□□□ -1.4
PCDH15-227ENST00000614895 PTPN14Q15678 1187 aa6.31□□□□□ -1.4
PCDH15-227ENST00000614895 UVSSAQ2YD98 709 aa6.31□□□□□ -1.4
PCDH15-227ENST00000614895 TCP11L2Q8N4U5 519 aa6.31□□□□□ -1.4
PCDH15-227ENST00000614895 GTF2A1P52655 376 aaPredicted RBP6.3□□□□□ -1.4
PCDH15-227ENST00000614895 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.3□□□□□ -1.4
PCDH15-227ENST00000614895 PLCD3Q8N3E9 789 aa6.3□□□□□ -1.4
PCDH15-227ENST00000614895 IGHDP01880 384 aa6.3□□□□□ -1.4
PCDH15-227ENST00000614895 NOLC1Q14978 699 aaKnown RBP eCLIP6.3□□□□□ -1.4
PCDH15-227ENST00000614895 USP25Q9UHP3 1055 aa6.3□□□□□ -1.4
PCDH15-227ENST00000614895 TRAK1Q9UPV9 953 aa6.3□□□□□ -1.4
PCDH15-227ENST00000614895 LRSAM1Q6UWE0 723 aa6.3□□□□□ -1.4
PCDH15-227ENST00000614895 RBM27Q9P2N5 1060 aaKnown RBP6.3□□□□□ -1.4
PCDH15-227ENST00000614895 MYOM3Q5VTT5 1437 aa6.3□□□□□ -1.4
PCDH15-227ENST00000614895 POLR3GO15318 223 aaPredicted RBP6.3□□□□□ -1.4
PCDH15-227ENST00000614895 HS1BP3Q53T59 392 aa6.3□□□□□ -1.4
PCDH15-227ENST00000614895 CCDC183Q5T5S1 534 aa6.3□□□□□ -1.4
PCDH15-227ENST00000614895 OLFM4Q6UX06 510 aa6.3□□□□□ -1.4
PCDH15-227ENST00000614895 UBXN4Q92575 508 aa6.3□□□□□ -1.4
PCDH15-227ENST00000614895 C1orf115Q9H7X2 142 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms