RNA–Protein interactions for RNA: ENST00000613930.4

SLC6A6-205, Transcript of solute carrier family 6 member 6, humanhuman

TSL 2

Gene SLC6A6, Length 988 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-205ENST00000613930 MSH6P52701 1360 aa27.74■■■□□ 2.03
SLC6A6-205ENST00000613930 ADGRL3Q9HAR2 1447 aa27.73■■■□□ 2.03
SLC6A6-205ENST00000613930 C19orf44Q9H6X5 657 aa27.72■■■□□ 2.03
SLC6A6-205ENST00000613930 UBAP1LF5GYI3 381 aa27.69■■■□□ 2.02
SLC6A6-205ENST00000613930 MINK1Q8N4C8 1332 aaPredicted RBP27.68■■■□□ 2.02
SLC6A6-205ENST00000613930 CENPJQ9HC77 1338 aaPredicted RBP27.67■■■□□ 2.02
SLC6A6-205ENST00000613930 ATF3P18847 181 aa27.66■■■□□ 2.02
SLC6A6-205ENST00000613930 HIRIP3Q9BW71 556 aaPredicted RBP27.66■■■□□ 2.02
SLC6A6-205ENST00000613930 EIF3AQ14152 1382 aaKnown RBP27.64■■■□□ 2.02
SLC6A6-205ENST00000613930 TOM1O60784 492 aa27.64■■■□□ 2.02
SLC6A6-205ENST00000613930 QRICH2Q9H0J4 1663 aa27.64■■■□□ 2.02
SLC6A6-205ENST00000613930 CADPS2Q86UW7 1296 aa27.63■■■□□ 2.01
SLC6A6-205ENST00000613930 DCCP43146 1447 aa27.63■■■□□ 2.01
SLC6A6-205ENST00000613930 USP47Q96K76 1375 aa27.6■■■□□ 2.01
SLC6A6-205ENST00000613930 CDC42BPGQ6DT37 1551 aa27.6■■■□□ 2.01
SLC6A6-205ENST00000613930 PIP4K2BP78356 416 aa27.6■■■□□ 2.01
SLC6A6-205ENST00000613930 ADGRB2O60241 1585 aa27.59■■■□□ 2.01
SLC6A6-205ENST00000613930 NUTM2FA1L443 756 aa27.58■■■□□ 2.01
SLC6A6-205ENST00000613930 SLAIN2Q9P270 581 aa27.58■■■□□ 2.01
SLC6A6-205ENST00000613930 SCAF1Q9H7N4 1312 aaKnown RBP27.58■■■□□ 2.01
SLC6A6-205ENST00000613930 MST1RQ04912 1400 aa27.57■■■□□ 2
SLC6A6-205ENST00000613930 ST20-MTHFSA0A0A6YYL1 179 aa27.56■■■□□ 2
SLC6A6-205ENST00000613930 FMN2Q9NZ56 1722 aa27.55■■■□□ 2
SLC6A6-205ENST00000613930 WASLO00401 505 aaPredicted RBP27.54■■■□□ 2
SLC6A6-205ENST00000613930 C1orf167Q5SNV9 1468 aa27.51■■■□□ 2
SLC6A6-205ENST00000613930 CDK19Q9BWU1 502 aa27.51■■□□□ 1.99
SLC6A6-205ENST00000613930 TULP4Q9NRJ4 1543 aa27.5■■□□□ 1.99
SLC6A6-205ENST00000613930 RGPD8O14715 1765 aaPredicted RBP27.48■■□□□ 1.99
SLC6A6-205ENST00000613930 HSPA5P11021 654 aaKnown RBP27.48■■□□□ 1.99
SLC6A6-205ENST00000613930 ZEB1P37275 1124 aaPredicted RBP27.48■■□□□ 1.99
SLC6A6-205ENST00000613930 EIF4G2P78344 907 aaKnown RBP eCLIP27.48■■□□□ 1.991e-7■■■■■ 37.3
SLC6A6-205ENST00000613930 ROBO1Q9Y6N7 1651 aa27.48■■□□□ 1.99
SLC6A6-205ENST00000613930 TESK2Q96S53 571 aa27.47■■□□□ 1.99
SLC6A6-205ENST00000613930 ORAI2Q96SN7 254 aa27.47■■□□□ 1.99
SLC6A6-205ENST00000613930 SBNO2Q9Y2G9 1366 aa27.47■■□□□ 1.99
SLC6A6-205ENST00000613930 EVC2Q86UK5 1308 aa27.46■■□□□ 1.99
SLC6A6-205ENST00000613930 USP32Q8NFA0 1604 aa27.46■■□□□ 1.99
SLC6A6-205ENST00000613930 CABP2Q9NPB3 220 aa27.46■■□□□ 1.99
SLC6A6-205ENST00000613930 PRR36Q9H6K5 1346 aa27.45■■□□□ 1.99
SLC6A6-205ENST00000613930 SRPK2P78362 688 aaKnown RBP27.45■■□□□ 1.98
SLC6A6-205ENST00000613930 ESCO1Q5FWF5 840 aa27.45■■□□□ 1.98
SLC6A6-205ENST00000613930 BRINP3Q76B58 766 aa27.45■■□□□ 1.98
SLC6A6-205ENST00000613930 ANKARQ7Z5J8 1434 aa27.42■■□□□ 1.98
SLC6A6-205ENST00000613930 NUDT16Q96DE0 195 aaKnown RBP27.42■■□□□ 1.98
SLC6A6-205ENST00000613930 ATP7BP35670 1465 aa27.4■■□□□ 1.98
SLC6A6-205ENST00000613930 DDX17Q92841 729 aaKnown RBP27.38■■□□□ 1.97
SLC6A6-205ENST00000613930 DISP3Q9P2K9 1392 aa27.37■■□□□ 1.97
SLC6A6-205ENST00000613930 TMF1P82094 1093 aa27.36■■□□□ 1.97
SLC6A6-205ENST00000613930 PMFBP1Q8TBY8 1022 aa27.36■■□□□ 1.97
SLC6A6-205ENST00000613930 PHF8Q9UPP1 1060 aa27.36■■□□□ 1.97
SLC6A6-205ENST00000613930 ITSN1Q15811 1721 aa27.35■■□□□ 1.97
SLC6A6-205ENST00000613930 TOPAZ1Q8N9V7 1692 aa27.34■■□□□ 1.97
SLC6A6-205ENST00000613930 SLC24A1O60721 1099 aa27.34■■□□□ 1.97
SLC6A6-205ENST00000613930 CCDC61Q9Y6R9 512 aa27.34■■□□□ 1.97
SLC6A6-205ENST00000613930 FOXO3O43524 673 aa27.33■■□□□ 1.97
SLC6A6-205ENST00000613930 HSPA1LP34931 641 aa27.33■■□□□ 1.97
SLC6A6-205ENST00000613930 KIF1AQ12756 1690 aa27.33■■□□□ 1.97
SLC6A6-205ENST00000613930 NHSL1Q5SYE7 1610 aa27.31■■□□□ 1.96
SLC6A6-205ENST00000613930 PHLPP1O60346 1717 aa27.31■■□□□ 1.96
SLC6A6-205ENST00000613930 PPIP5K1Q6PFW1 1433 aa27.31■■□□□ 1.96
SLC6A6-205ENST00000613930 AHDC1Q5TGY3 1603 aaPredicted RBP27.3■■□□□ 1.96
SLC6A6-205ENST00000613930 XPCQ01831 940 aaPredicted RBP27.29■■□□□ 1.96
SLC6A6-205ENST00000613930 ATAD2Q6PL18 1390 aa27.29■■□□□ 1.96
SLC6A6-205ENST00000613930 CABP1Q9NZU7 370 aa27.28■■□□□ 1.96
SLC6A6-205ENST00000613930 NGDNQ8NEJ9 315 aaKnown RBP27.27■■□□□ 1.96
SLC6A6-205ENST00000613930 NPHP3Q7Z494 1330 aa27.26■■□□□ 1.95
SLC6A6-205ENST00000613930 PLEKHG3A1L390 1219 aa27.26■■□□□ 1.95
SLC6A6-205ENST00000613930 PUS7Q96PZ0 661 aaKnown RBP27.26■■□□□ 1.95
SLC6A6-205ENST00000613930 C11orf95C9JLR9 678 aaPredicted RBP27.25■■□□□ 1.95
SLC6A6-205ENST00000613930 TMC1Q8TDI8 760 aa27.25■■□□□ 1.95
SLC6A6-205ENST00000613930 POLR3GLQ9BT43 218 aa27.25■■□□□ 1.95
SLC6A6-205ENST00000613930 ACEP12821 1306 aa27.24■■□□□ 1.95
SLC6A6-205ENST00000613930 CDCA8Q53HL2 280 aa27.24■■□□□ 1.95
SLC6A6-205ENST00000613930 COL16A1Q07092 1604 aaPredicted RBP27.23■■□□□ 1.95
SLC6A6-205ENST00000613930 PSME1Q06323 249 aa27.23■■□□□ 1.95
SLC6A6-205ENST00000613930 KRT28Q7Z3Y7 464 aa27.23■■□□□ 1.95
SLC6A6-205ENST00000613930 PXDNQ92626 1479 aa27.22■■□□□ 1.95
SLC6A6-205ENST00000613930 SLC12A5Q9H2X9 1139 aa27.22■■□□□ 1.95
SLC6A6-205ENST00000613930 SOS2Q07890 1332 aaPredicted RBP27.21■■□□□ 1.95
SLC6A6-205ENST00000613930 POLR3AO14802 1390 aaPredicted RBP27.21■■□□□ 1.95
SLC6A6-205ENST00000613930 LRRC59Q96AG4 307 aaKnown RBP27.15■■□□□ 1.94
SLC6A6-205ENST00000613930 AKAP12Q02952 1782 aa27.14■■□□□ 1.94
SLC6A6-205ENST00000613930 MYOM1P52179 1685 aa27.14■■□□□ 1.94
SLC6A6-205ENST00000613930 KIF7Q2M1P5 1343 aa27.14■■□□□ 1.93
SLC6A6-205ENST00000613930 CD163L1Q9NR16 1453 aa27.13■■□□□ 1.93
SLC6A6-205ENST00000613930 TRPM3Q9HCF6 1732 aaPredicted RBP27.13■■□□□ 1.93
SLC6A6-205ENST00000613930 NINLQ9Y2I6 1382 aa27.12■■□□□ 1.93
SLC6A6-205ENST00000613930 PAK3O75914 559 aaPredicted RBP27.12■■□□□ 1.93
SLC6A6-205ENST00000613930 CPSF1Q10570 1443 aaKnown RBP27.12■■□□□ 1.93
SLC6A6-205ENST00000613930 HDGFL2Q7Z4V5 671 aaPredicted RBP27.11■■□□□ 1.93
SLC6A6-205ENST00000613930 SPATA31A3Q5VYP0 1347 aa27.11■■□□□ 1.93
SLC6A6-205ENST00000613930 SBNO1A3KN83 1393 aa27.1■■□□□ 1.93
SLC6A6-205ENST00000613930 KTN1Q86UP2 1357 aaKnown RBP27.1■■□□□ 1.93
SLC6A6-205ENST00000613930 USP6P35125 1406 aa27.1■■□□□ 1.93
SLC6A6-205ENST00000613930 LMOD2Q6P5Q4 547 aa27.1■■□□□ 1.93
SLC6A6-205ENST00000613930 ZNF692Q9BU19 519 aaPredicted RBP27.1■■□□□ 1.93
SLC6A6-205ENST00000613930 A0A1W2PP64 1363 aa27.09■■□□□ 1.93
SLC6A6-205ENST00000613930 TERF2IPQ9NYB0 399 aa27.09■■□□□ 1.93
SLC6A6-205ENST00000613930 JCADQ9P266 1359 aa27.09■■□□□ 1.93
SLC6A6-205ENST00000613930 TNS3Q68CZ2 1445 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms