RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 RBM26Q5T8P6 1007 aaKnown RBP7.09□□□□□ -1.27
SYCP1-209ENST00000613524 TMEM2Q9UHN6 1383 aa7.09□□□□□ -1.27
SYCP1-209ENST00000613524 RIMS2Q9UQ26 1411 aa7.09□□□□□ -1.27
SYCP1-209ENST00000613524 REREQ9P2R6 1566 aa7.09□□□□□ -1.27
SYCP1-209ENST00000613524 NPHP4O75161 1426 aaPredicted RBP7.09□□□□□ -1.27
SYCP1-209ENST00000613524 WDR70Q9NW82 654 aa7.09□□□□□ -1.27
SYCP1-209ENST00000613524 AMOTL2Q9Y2J4 779 aa7.09□□□□□ -1.27
SYCP1-209ENST00000613524 PIK3C2BO00750 1634 aa7.09□□□□□ -1.27
SYCP1-209ENST00000613524 EFCAB6Q5THR3 1501 aa7.08□□□□□ -1.28
SYCP1-209ENST00000613524 NOS1P29475 1434 aa7.08□□□□□ -1.28
SYCP1-209ENST00000613524 HDGFP51858 240 aaKnown RBP7.08□□□□□ -1.28
SYCP1-209ENST00000613524 ZMYND15Q9H091 742 aa7.08□□□□□ -1.28
SYCP1-209ENST00000613524 MYO5BQ9ULV0 1848 aa7.08□□□□□ -1.28
SYCP1-209ENST00000613524 E9PCH4 1651 aa7.07□□□□□ -1.28
SYCP1-209ENST00000613524 SYNMO15061 1565 aa7.07□□□□□ -1.28
SYCP1-209ENST00000613524 NUTM2BA6NNL0 878 aaPredicted RBP7.07□□□□□ -1.28
SYCP1-209ENST00000613524 NUTM2EB1AL46 878 aaPredicted RBP7.07□□□□□ -1.28
SYCP1-209ENST00000613524 NUTM2AQ8IVF1 878 aaPredicted RBP7.07□□□□□ -1.28
SYCP1-209ENST00000613524 RNF17Q9BXT8 1623 aaKnown RBP7.07□□□□□ -1.28
SYCP1-209ENST00000613524 SCAF11Q99590 1463 aaKnown RBP7.06□□□□□ -1.28
SYCP1-209ENST00000613524 POGKQ9P215 609 aa7.06□□□□□ -1.28
SYCP1-209ENST00000613524 STRCQ7RTU9 1775 aa7.06□□□□□ -1.28
SYCP1-209ENST00000613524 EIF2AK4Q9P2K8 1649 aaKnown RBP7.06□□□□□ -1.28
SYCP1-209ENST00000613524 MINK1Q8N4C8 1332 aaPredicted RBP7.06□□□□□ -1.28
SYCP1-209ENST00000613524 FAM117AQ9C073 453 aa7.06□□□□□ -1.28
SYCP1-209ENST00000613524 TMEM94Q12767 1356 aa7.05□□□□□ -1.28
SYCP1-209ENST00000613524 NLRP1Q9C000 1473 aa7.05□□□□□ -1.28
SYCP1-209ENST00000613524 VGFO15240 615 aaPredicted RBP7.05□□□□□ -1.28
SYCP1-209ENST00000613524 MLLT3P42568 568 aaPredicted RBP7.05□□□□□ -1.28
SYCP1-209ENST00000613524 PLA2R1Q13018 1463 aa7.05□□□□□ -1.28
SYCP1-209ENST00000613524 ZBTB7CA1YPR0 619 aa7.05□□□□□ -1.28
SYCP1-209ENST00000613524 ATF3P18847 181 aa7.05□□□□□ -1.28
SYCP1-209ENST00000613524 HSPA1LP34931 641 aa7.05□□□□□ -1.28
SYCP1-209ENST00000613524 NBPF1Q3BBV0 1214 aa7.05□□□□□ -1.28
SYCP1-209ENST00000613524 L3MBTL2Q969R5 705 aa7.05□□□□□ -1.28
SYCP1-209ENST00000613524 METP08581 1390 aa7.05□□□□□ -1.28
SYCP1-209ENST00000613524 SOX12O15370 315 aa7.04□□□□□ -1.28
SYCP1-209ENST00000613524 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.04□□□□□ -1.28
SYCP1-209ENST00000613524 CLUAP1Q96AJ1 413 aa7.04□□□□□ -1.28
SYCP1-209ENST00000613524 GCC2Q8IWJ2 1684 aa7.04□□□□□ -1.28
SYCP1-209ENST00000613524 TOM1O60784 492 aa7.04□□□□□ -1.28
SYCP1-209ENST00000613524 ZMYND10O75800 440 aa7.04□□□□□ -1.28
SYCP1-209ENST00000613524 TET3O43151 1660 aa7.04□□□□□ -1.28
SYCP1-209ENST00000613524 SPATA31D1Q6ZQQ2 1576 aa7.04□□□□□ -1.28
SYCP1-209ENST00000613524 PMFBP1Q8TBY8 1022 aa7.03□□□□□ -1.28
SYCP1-209ENST00000613524 KDM4CQ9H3R0 1056 aa7.03□□□□□ -1.28
SYCP1-209ENST00000613524 FBXO41Q8TF61 875 aa7.03□□□□□ -1.28
SYCP1-209ENST00000613524 MROH2AA6NES4 1674 aa7.03□□□□□ -1.28
SYCP1-209ENST00000613524 DEPDC5O75140 1603 aa7.03□□□□□ -1.28
SYCP1-209ENST00000613524 CLTCL1P53675 1640 aa7.03□□□□□ -1.28
SYCP1-209ENST00000613524 NUTM2GQ5VZR2 741 aa7.03□□□□□ -1.28
SYCP1-209ENST00000613524 PRAM1Q96QH2 718 aa7.03□□□□□ -1.28
SYCP1-209ENST00000613524 MFRPQ9BY79 579 aa7.03□□□□□ -1.28
SYCP1-209ENST00000613524 RSPH6AQ9H0K4 717 aa7.03□□□□□ -1.28
SYCP1-209ENST00000613524 PCDHB8Q9UN66 801 aa7.03□□□□□ -1.28
SYCP1-209ENST00000613524 PCDHB13Q9Y5F0 798 aa7.03□□□□□ -1.28
SYCP1-209ENST00000613524 UNC13BO14795 1591 aa7.03□□□□□ -1.28
SYCP1-209ENST00000613524 SPDYE2BA6NHP3 402 aa7.02□□□□□ -1.29
SYCP1-209ENST00000613524 SPDYE6P0CI01 402 aa7.02□□□□□ -1.29
SYCP1-209ENST00000613524 ARHGAP31Q2M1Z3 1444 aa7.02□□□□□ -1.29
SYCP1-209ENST00000613524 SPDYE2Q495Y8 402 aa7.02□□□□□ -1.29
SYCP1-209ENST00000613524 ESCO1Q5FWF5 840 aa7.02□□□□□ -1.29
SYCP1-209ENST00000613524 IQGAP3Q86VI3 1631 aa7.02□□□□□ -1.29
SYCP1-209ENST00000613524 UBR1Q8IWV7 1749 aa7.02□□□□□ -1.29
SYCP1-209ENST00000613524 TONSLQ96HA7 1378 aa7.02□□□□□ -1.29
SYCP1-209ENST00000613524 TESPA1A2RU30 521 aaPredicted RBP7.01□□□□□ -1.29
SYCP1-209ENST00000613524 FOXO3O43524 673 aa7.01□□□□□ -1.29
SYCP1-209ENST00000613524 PAK3O75914 559 aaPredicted RBP7.01□□□□□ -1.29
SYCP1-209ENST00000613524 CCDC82Q8N4S0 544 aa7.01□□□□□ -1.29
SYCP1-209ENST00000613524 ORAI2Q96SN7 254 aa7.01□□□□□ -1.29
SYCP1-209ENST00000613524 ZC3H13Q5T200 1668 aaKnown RBP7.01□□□□□ -1.29
SYCP1-209ENST00000613524 ADAMTS2O95450 1211 aa7.01□□□□□ -1.29
SYCP1-209ENST00000613524 DSG3P32926 999 aa7.01□□□□□ -1.29
SYCP1-209ENST00000613524 ADGRB3O60242 1522 aa7.01□□□□□ -1.29
SYCP1-209ENST00000613524 MNX1P50219 401 aaPredicted RBP7.01□□□□□ -1.29
SYCP1-209ENST00000613524 PLEKHH1Q9ULM0 1364 aa7□□□□□ -1.29
SYCP1-209ENST00000613524 SPHKAPQ2M3C7 1700 aa7□□□□□ -1.29
SYCP1-209ENST00000613524 VWDEQ8N2E2 1590 aa7□□□□□ -1.29
SYCP1-209ENST00000613524 GSE1Q14687 1217 aa7□□□□□ -1.29
SYCP1-209ENST00000613524 SLAIN2Q9P270 581 aa7□□□□□ -1.29
SYCP1-209ENST00000613524 MSH6P52701 1360 aa7□□□□□ -1.29
SYCP1-209ENST00000613524 DHX57Q6P158 1386 aaKnown RBP7□□□□□ -1.29
SYCP1-209ENST00000613524 DISP3Q9P2K9 1392 aa7□□□□□ -1.29
SYCP1-209ENST00000613524 NEURL4Q96JN8 1562 aa6.99□□□□□ -1.29
SYCP1-209ENST00000613524 ANKRD30BQ9BXX2 1392 aa6.99□□□□□ -1.29
SYCP1-209ENST00000613524 IQGAP1P46940 1657 aa6.99□□□□□ -1.29
SYCP1-209ENST00000613524 SRPK2P78362 688 aaKnown RBP6.99□□□□□ -1.29
SYCP1-209ENST00000613524 CLEC11AQ9Y240 323 aa6.99□□□□□ -1.29
SYCP1-209ENST00000613524 RPRD2Q5VT52 1461 aaKnown RBP6.99□□□□□ -1.29
SYCP1-209ENST00000613524 LMTK2Q8IWU2 1503 aa6.98□□□□□ -1.29
SYCP1-209ENST00000613524 MEX3CQ5U5Q3 659 aaKnown RBP6.98□□□□□ -1.29
SYCP1-209ENST00000613524 TMC1Q8TDI8 760 aa6.98□□□□□ -1.29
SYCP1-209ENST00000613524 TBX22Q9Y458 520 aa6.98□□□□□ -1.29
SYCP1-209ENST00000613524 TMEM131LA2VDJ0 1609 aa6.98□□□□□ -1.29
SYCP1-209ENST00000613524 E2F4Q16254 413 aa6.98□□□□□ -1.29
SYCP1-209ENST00000613524 PTPRUQ92729 1446 aa6.98□□□□□ -1.29
SYCP1-209ENST00000613524 ROBO2Q9HCK4 1378 aa6.98□□□□□ -1.29
SYCP1-209ENST00000613524 PLEKHG1Q9ULL1 1385 aa6.98□□□□□ -1.29
SYCP1-209ENST00000613524 NBPF8Q3BBV2 869 aa6.98□□□□□ -1.29
SYCP1-209ENST00000613524 CABLES1Q8TDN4 633 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms