RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 TRPM1Q7Z4N2 1603 aa23.75■■□□□ 1.39
IRF1-211ENST00000613424 POGKQ9P215 609 aa23.75■■□□□ 1.39
IRF1-211ENST00000613424 SLAIN2Q9P270 581 aa23.75■■□□□ 1.39
IRF1-211ENST00000613424 NALCNQ8IZF0 1738 aa23.73■■□□□ 1.39
IRF1-211ENST00000613424 SAFB2Q14151 953 aaKnown RBP eCLIP23.73■■□□□ 1.39
IRF1-211ENST00000613424 ROCK2O75116 1388 aaKnown RBP23.72■■□□□ 1.39
IRF1-211ENST00000613424 DCCP43146 1447 aa23.72■■□□□ 1.39
IRF1-211ENST00000613424 ARHGEF28Q8N1W1 1705 aaKnown RBP23.67■■□□□ 1.38
IRF1-211ENST00000613424 GPRASP1Q5JY77 1395 aa23.66■■□□□ 1.38
IRF1-211ENST00000613424 RALGAPBQ86X10 1494 aa23.65■■□□□ 1.38
IRF1-211ENST00000613424 CARD11Q9BXL7 1154 aa23.65■■□□□ 1.38
IRF1-211ENST00000613424 MST1RQ04912 1400 aa23.65■■□□□ 1.38
IRF1-211ENST00000613424 MINK1Q8N4C8 1332 aaPredicted RBP23.64■■□□□ 1.38
IRF1-211ENST00000613424 HIRIP3Q9BW71 556 aaPredicted RBP23.63■■□□□ 1.37
IRF1-211ENST00000613424 CDC42BPGQ6DT37 1551 aa23.62■■□□□ 1.37
IRF1-211ENST00000613424 ROBO1Q9Y6N7 1651 aa23.6■■□□□ 1.37
IRF1-211ENST00000613424 CENPJQ9HC77 1338 aaPredicted RBP23.6■■□□□ 1.37
IRF1-211ENST00000613424 NUTM2FA1L443 756 aa23.6■■□□□ 1.37
IRF1-211ENST00000613424 HSPA1LP34931 641 aa23.6■■□□□ 1.37
IRF1-211ENST00000613424 C1orf167Q5SNV9 1468 aa23.6■■□□□ 1.37
IRF1-211ENST00000613424 BRINP3Q76B58 766 aa23.59■■□□□ 1.37
IRF1-211ENST00000613424 ORAI2Q96SN7 254 aa23.58■■□□□ 1.37
IRF1-211ENST00000613424 WASLO00401 505 aaPredicted RBP23.57■■□□□ 1.36
IRF1-211ENST00000613424 ADGRB2O60241 1585 aa23.56■■□□□ 1.36
IRF1-211ENST00000613424 EIF3AQ14152 1382 aaKnown RBP23.55■■□□□ 1.36
IRF1-211ENST00000613424 ESCO1Q5FWF5 840 aa23.55■■□□□ 1.36
IRF1-211ENST00000613424 FMN2Q9NZ56 1722 aa23.55■■□□□ 1.36
IRF1-211ENST00000613424 CDK19Q9BWU1 502 aa23.53■■□□□ 1.36
IRF1-211ENST00000613424 QRICH2Q9H0J4 1663 aa23.51■■□□□ 1.35
IRF1-211ENST00000613424 DDX17Q92841 729 aaKnown RBP23.49■■□□□ 1.35
IRF1-211ENST00000613424 RGPD8O14715 1765 aaPredicted RBP23.48■■□□□ 1.35
IRF1-211ENST00000613424 PRR36Q9H6K5 1346 aa23.48■■□□□ 1.35
IRF1-211ENST00000613424 ANKARQ7Z5J8 1434 aa23.48■■□□□ 1.35
IRF1-211ENST00000613424 ST20-MTHFSA0A0A6YYL1 179 aa23.46■■□□□ 1.35
IRF1-211ENST00000613424 PHLPP1O60346 1717 aa23.46■■□□□ 1.35
IRF1-211ENST00000613424 AHDC1Q5TGY3 1603 aaPredicted RBP23.46■■□□□ 1.35
IRF1-211ENST00000613424 USP32Q8NFA0 1604 aa23.46■■□□□ 1.35
IRF1-211ENST00000613424 NUDT16Q96DE0 195 aaKnown RBP23.46■■□□□ 1.35
IRF1-211ENST00000613424 TULP4Q9NRJ4 1543 aa23.46■■□□□ 1.35
IRF1-211ENST00000613424 PHF8Q9UPP1 1060 aa23.45■■□□□ 1.34
IRF1-211ENST00000613424 USP47Q96K76 1375 aa23.44■■□□□ 1.34
IRF1-211ENST00000613424 EVC2Q86UK5 1308 aa23.44■■□□□ 1.34
IRF1-211ENST00000613424 FOXO3O43524 673 aa23.44■■□□□ 1.34
IRF1-211ENST00000613424 SRPK2P78362 688 aaKnown RBP23.44■■□□□ 1.34
IRF1-211ENST00000613424 CABP2Q9NPB3 220 aa23.44■■□□□ 1.34
IRF1-211ENST00000613424 PMFBP1Q8TBY8 1022 aa23.43■■□□□ 1.34
IRF1-211ENST00000613424 NHSL1Q5SYE7 1610 aa23.43■■□□□ 1.34
IRF1-211ENST00000613424 SBNO2Q9Y2G9 1366 aa23.42■■□□□ 1.34
IRF1-211ENST00000613424 TESK2Q96S53 571 aa23.41■■□□□ 1.34
IRF1-211ENST00000613424 COL16A1Q07092 1604 aaPredicted RBP23.41■■□□□ 1.34
IRF1-211ENST00000613424 NPHP3Q7Z494 1330 aa23.4■■□□□ 1.34
IRF1-211ENST00000613424 CCDC61Q9Y6R9 512 aa23.4■■□□□ 1.34
IRF1-211ENST00000613424 ATP7BP35670 1465 aa23.4■■□□□ 1.34
IRF1-211ENST00000613424 SOS2Q07890 1332 aaPredicted RBP23.39■■□□□ 1.34
IRF1-211ENST00000613424 XPCQ01831 940 aaPredicted RBP23.38■■□□□ 1.33
IRF1-211ENST00000613424 LRRC59Q96AG4 307 aaKnown RBP23.38■■□□□ 1.33
IRF1-211ENST00000613424 KIF1AQ12756 1690 aa23.38■■□□□ 1.33
IRF1-211ENST00000613424 KRT28Q7Z3Y7 464 aa23.36■■□□□ 1.33
IRF1-211ENST00000613424 PLEKHG3A1L390 1219 aa23.35■■□□□ 1.33
IRF1-211ENST00000613424 SLC24A1O60721 1099 aa23.35■■□□□ 1.33
IRF1-211ENST00000613424 PSME1Q06323 249 aa23.35■■□□□ 1.33
IRF1-211ENST00000613424 NGDNQ8NEJ9 315 aaKnown RBP23.35■■□□□ 1.33
IRF1-211ENST00000613424 EIF4G2P78344 907 aaKnown RBP eCLIP23.34■■□□□ 1.33
IRF1-211ENST00000613424 JCADQ9P266 1359 aa23.34■■□□□ 1.33
IRF1-211ENST00000613424 PXDNQ92626 1479 aa23.34■■□□□ 1.33
IRF1-211ENST00000613424 ITSN1Q15811 1721 aa23.33■■□□□ 1.33
IRF1-211ENST00000613424 CABP1Q9NZU7 370 aa23.33■■□□□ 1.33
IRF1-211ENST00000613424 PPIP5K1Q6PFW1 1433 aa23.32■■□□□ 1.32
IRF1-211ENST00000613424 ACEP12821 1306 aa23.32■■□□□ 1.32
IRF1-211ENST00000613424 TOPAZ1Q8N9V7 1692 aa23.32■■□□□ 1.32
IRF1-211ENST00000613424 HSPA5P11021 654 aaKnown RBP23.31■■□□□ 1.32
IRF1-211ENST00000613424 TMF1P82094 1093 aa23.3■■□□□ 1.32
IRF1-211ENST00000613424 PUS7Q96PZ0 661 aaKnown RBP23.3■■□□□ 1.32
IRF1-211ENST00000613424 ATAD2Q6PL18 1390 aa23.29■■□□□ 1.32
IRF1-211ENST00000613424 POLR3AO14802 1390 aaPredicted RBP23.28■■□□□ 1.32
IRF1-211ENST00000613424 SPATA31A3Q5VYP0 1347 aa23.27■■□□□ 1.32
IRF1-211ENST00000613424 PNPLA6Q8IY17 1366 aa23.27■■□□□ 1.31
IRF1-211ENST00000613424 DISP3Q9P2K9 1392 aa23.27■■□□□ 1.31
IRF1-211ENST00000613424 SHPRHQ149N8 1683 aa23.25■■□□□ 1.31
IRF1-211ENST00000613424 SBNO1A3KN83 1393 aa23.25■■□□□ 1.31
IRF1-211ENST00000613424 SPATA31A6Q5VVP1 1343 aa23.24■■□□□ 1.31
IRF1-211ENST00000613424 TMC1Q8TDI8 760 aa23.23■■□□□ 1.31
IRF1-211ENST00000613424 PAK3O75914 559 aaPredicted RBP23.22■■□□□ 1.31
IRF1-211ENST00000613424 LMOD2Q6P5Q4 547 aa23.22■■□□□ 1.31
IRF1-211ENST00000613424 SLC12A5Q9H2X9 1139 aa23.22■■□□□ 1.31
IRF1-211ENST00000613424 NUTM2BA6NNL0 878 aaPredicted RBP23.21■■□□□ 1.31
IRF1-211ENST00000613424 NUTM2EB1AL46 878 aaPredicted RBP23.21■■□□□ 1.31
IRF1-211ENST00000613424 CDCA8Q53HL2 280 aa23.21■■□□□ 1.31
IRF1-211ENST00000613424 NUTM2AQ8IVF1 878 aaPredicted RBP23.21■■□□□ 1.31
IRF1-211ENST00000613424 ZNF692Q9BU19 519 aaPredicted RBP23.21■■□□□ 1.31
IRF1-211ENST00000613424 TNS3Q68CZ2 1445 aa23.21■■□□□ 1.31
IRF1-211ENST00000613424 TRPM3Q9HCF6 1732 aaPredicted RBP23.2■■□□□ 1.3
IRF1-211ENST00000613424 CPSF1Q10570 1443 aaKnown RBP23.17■■□□□ 1.3
IRF1-211ENST00000613424 MED1Q15648 1581 aaPredicted RBP23.17■■□□□ 1.3
IRF1-211ENST00000613424 USP6P35125 1406 aa23.16■■□□□ 1.3
IRF1-211ENST00000613424 ARHGEF10O15013 1369 aa23.16■■□□□ 1.3
IRF1-211ENST00000613424 COL22A1Q8NFW1 1626 aaPredicted RBP23.16■■□□□ 1.3
IRF1-211ENST00000613424 LRP6O75581 1613 aa23.15■■□□□ 1.3
IRF1-211ENST00000613424 BRD4O60885 1362 aaPredicted RBP23.14■■□□□ 1.3
IRF1-211ENST00000613424 NINLQ9Y2I6 1382 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms