RNA–Protein interactions for RNA: ENST00000611967.4

PCSK6-215, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

TSL 1 (best) BASIC

Gene PCSK6, Length 3,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-215ENST00000611967 RARSP54136 660 aaKnown RBP27.53■■■□□ 2
PCSK6-215ENST00000611967 TRMT2AQ8IZ69 625 aaKnown RBP27.53■■■□□ 2
PCSK6-215ENST00000611967 ADGRL2O95490 1459 aa27.52■■■□□ 2
PCSK6-215ENST00000611967 ERBB4Q15303 1308 aa27.52■■■□□ 2
PCSK6-215ENST00000611967 ITPRIPQ8IWB1 547 aa27.51■■□□□ 1.99
PCSK6-215ENST00000611967 DDX11L8A8MPP1 907 aa27.51■■□□□ 1.99
PCSK6-215ENST00000611967 RBM10P98175 930 aaKnown RBP27.51■■□□□ 1.99
PCSK6-215ENST00000611967 CFAP65Q6ZU64 1925 aaKnown RBP27.51■■□□□ 1.99
PCSK6-215ENST00000611967 ANP32BQ92688 251 aaKnown RBP27.51■■□□□ 1.99
PCSK6-215ENST00000611967 TCP11L2Q8N4U5 519 aa27.5■■□□□ 1.99
PCSK6-215ENST00000611967 A2MP01023 1474 aa27.5■■□□□ 1.99
PCSK6-215ENST00000611967 E9PCH4 1651 aa27.5■■□□□ 1.99
PCSK6-215ENST00000611967 MORC1Q86VD1 984 aa27.49■■□□□ 1.99
PCSK6-215ENST00000611967 ZBTB7CA1YPR0 619 aa27.49■■□□□ 1.99
PCSK6-215ENST00000611967 INSRP06213 1382 aa27.46■■□□□ 1.99
PCSK6-215ENST00000611967 ADGBQ8N7X0 1667 aa27.45■■□□□ 1.98
PCSK6-215ENST00000611967 GAS2L3Q86XJ1 694 aa27.45■■□□□ 1.98
PCSK6-215ENST00000611967 SMC4Q9NTJ3 1288 aa27.44■■□□□ 1.98
PCSK6-215ENST00000611967 ABCC1P33527 1531 aa27.44■■□□□ 1.98
PCSK6-215ENST00000611967 KIAA1211Q6ZU35 1233 aa27.44■■□□□ 1.98
PCSK6-215ENST00000611967 KDM5DQ9BY66 1539 aa27.44■■□□□ 1.98
PCSK6-215ENST00000611967 FAM135AQ9P2D6 1515 aa27.43■■□□□ 1.98
PCSK6-215ENST00000611967 TSR2Q969E8 191 aaKnown RBP27.43■■□□□ 1.98
PCSK6-215ENST00000611967 TNPO1Q92973 898 aaKnown RBP27.43■■□□□ 1.98
PCSK6-215ENST00000611967 LNPKQ9C0E8 428 aa27.43■■□□□ 1.98
PCSK6-215ENST00000611967 GBP4Q96PP9 640 aa27.43■■□□□ 1.98
PCSK6-215ENST00000611967 GPRASP1Q5JY77 1395 aa27.41■■□□□ 1.98
PCSK6-215ENST00000611967 U2AF1L5P0DN76 240 aaPredicted RBP27.41■■□□□ 1.98
PCSK6-215ENST00000611967 U2AF1Q01081 240 aaKnown RBP eCLIP27.41■■□□□ 1.98
PCSK6-215ENST00000611967 CROCC2H7BZ55 1655 aa27.4■■□□□ 1.98
PCSK6-215ENST00000611967 DZIP1LQ8IYY4 767 aaKnown RBP27.4■■□□□ 1.98
PCSK6-215ENST00000611967 MSNP26038 577 aaKnown RBP27.4■■□□□ 1.98
PCSK6-215ENST00000611967 FAM13BQ9NYF5 915 aa27.4■■□□□ 1.98
PCSK6-215ENST00000611967 ZKSCAN2Q63HK3 967 aa27.39■■□□□ 1.98
PCSK6-215ENST00000611967 SHANK2Q9UPX8 1470 aa27.39■■□□□ 1.97
PCSK6-215ENST00000611967 YEATS2Q9ULM3 1422 aa27.37■■□□□ 1.97
PCSK6-215ENST00000611967 MVPQ14764 893 aaKnown RBP27.37■■□□□ 1.97
PCSK6-215ENST00000611967 ARHGEF5Q12774 1597 aa27.37■■□□□ 1.97
PCSK6-215ENST00000611967 RUNDC1Q96C34 613 aa27.36■■□□□ 1.97
PCSK6-215ENST00000611967 CARD14Q9BXL6 1004 aa27.36■■□□□ 1.97
PCSK6-215ENST00000611967 TRPM1Q7Z4N2 1603 aa27.36■■□□□ 1.97
PCSK6-215ENST00000611967 CFAP70Q5T0N1 1121 aa27.36■■□□□ 1.97
PCSK6-215ENST00000611967 DDX49Q9Y6V7 483 aaKnown RBP27.36■■□□□ 1.97
PCSK6-215ENST00000611967 U2SURPO15042 1029 aaKnown RBP27.36■■□□□ 1.97
PCSK6-215ENST00000611967 KANK1Q14678 1352 aa27.35■■□□□ 1.97
PCSK6-215ENST00000611967 FBXO31Q5XUX0 539 aaPredicted RBP27.35■■□□□ 1.97
PCSK6-215ENST00000611967 NLRP1Q9C000 1473 aa27.34■■□□□ 1.97
PCSK6-215ENST00000611967 NASPP49321 788 aaPredicted RBP27.34■■□□□ 1.97
PCSK6-215ENST00000611967 GOLGA6L22H0YM25 854 aa27.33■■□□□ 1.97
PCSK6-215ENST00000611967 PLA2R1Q13018 1463 aa27.33■■□□□ 1.97
PCSK6-215ENST00000611967 R3HCC1Q9Y3T6 440 aaKnown RBP27.33■■□□□ 1.96
PCSK6-215ENST00000611967 ATP7AQ04656 1500 aa27.31■■□□□ 1.96
PCSK6-215ENST00000611967 ASXL1Q8IXJ9 1541 aa27.31■■□□□ 1.96
PCSK6-215ENST00000611967 MTHFSP49914 203 aa27.31■■□□□ 1.96
PCSK6-215ENST00000611967 ABCA9Q8IUA7 1624 aa27.31■■□□□ 1.96
PCSK6-215ENST00000611967 RBM42Q9BTD8 480 aaKnown RBP27.3■■□□□ 1.96
PCSK6-215ENST00000611967 STAG3Q9UJ98 1225 aa27.3■■□□□ 1.96
PCSK6-215ENST00000611967 SAFB2Q14151 953 aaKnown RBP eCLIP27.29■■□□□ 1.96
PCSK6-215ENST00000611967 PIK3C2GO75747 1445 aa27.29■■□□□ 1.96
PCSK6-215ENST00000611967 EXOSC9Q06265 439 aaKnown RBP27.28■■□□□ 1.96
PCSK6-215ENST00000611967 SLC12A5Q9H2X9 1139 aa27.28■■□□□ 1.96
PCSK6-215ENST00000611967 NINLQ9Y2I6 1382 aa27.28■■□□□ 1.96
PCSK6-215ENST00000611967 SSFA2P28290 1259 aa27.28■■□□□ 1.96
PCSK6-215ENST00000611967 CFAP53Q96M91 514 aa27.28■■□□□ 1.96
PCSK6-215ENST00000611967 ESF1Q9H501 851 aaKnown RBP27.28■■□□□ 1.96
PCSK6-215ENST00000611967 DUOX2Q9NRD8 1548 aa27.27■■□□□ 1.96
PCSK6-215ENST00000611967 ZNF518AQ6AHZ1 1483 aa27.27■■□□□ 1.96
PCSK6-215ENST00000611967 TPM2P07951 284 aa27.26■■□□□ 1.96
PCSK6-215ENST00000611967 TRAK1Q9UPV9 953 aa27.26■■□□□ 1.95
PCSK6-215ENST00000611967 PRDM15P57071 1507 aaPredicted RBP27.26■■□□□ 1.95
PCSK6-215ENST00000611967 ANKRD45Q5TZF3 282 aa27.26■■□□□ 1.95
PCSK6-215ENST00000611967 ZFYVE16Q7Z3T8 1539 aa27.25■■□□□ 1.95
PCSK6-215ENST00000611967 FOXD4L5Q5VV16 416 aaPredicted RBP27.23■■□□□ 1.95
PCSK6-215ENST00000611967 FOXD4L4Q8WXT5 416 aaPredicted RBP27.23■■□□□ 1.95
PCSK6-215ENST00000611967 UGGT1Q9NYU2 1555 aa27.23■■□□□ 1.95
PCSK6-215ENST00000611967 TRIM27P14373 513 aa27.23■■□□□ 1.95
PCSK6-215ENST00000611967 TPRNQ4KMQ1 711 aa27.23■■□□□ 1.95
PCSK6-215ENST00000611967 NGEFQ8N5V2 710 aa27.23■■□□□ 1.95
PCSK6-215ENST00000611967 POGZQ7Z3K3 1410 aa27.23■■□□□ 1.95
PCSK6-215ENST00000611967 NOB1Q9ULX3 412 aaKnown RBP27.23■■□□□ 1.95
PCSK6-215ENST00000611967 SKOR2Q2VWA4 1001 aaPredicted RBP27.22■■□□□ 1.95
PCSK6-215ENST00000611967 MCTP1Q6DN14 999 aa27.22■■□□□ 1.95
PCSK6-215ENST00000611967 C1orf115Q9H7X2 142 aa27.22■■□□□ 1.95
PCSK6-215ENST00000611967 TMEM132EQ6IEE7 984 aa27.21■■□□□ 1.95
PCSK6-215ENST00000611967 CAVIN1Q6NZI2 390 aaKnown RBP27.21■■□□□ 1.95
PCSK6-215ENST00000611967 PDCL3Q9H2J4 239 aa27.21■■□□□ 1.95
PCSK6-215ENST00000611967 TMEM57Q8N5G2 664 aa27.21■■□□□ 1.95
PCSK6-215ENST00000611967 CD2BP2O95400 341 aaKnown RBP27.2■■□□□ 1.95
PCSK6-215ENST00000611967 SSH1Q8WYL5 1049 aa27.2■■□□□ 1.95
PCSK6-215ENST00000611967 DDX19BQ9UMR2 479 aa27.2■■□□□ 1.94
PCSK6-215ENST00000611967 CEBPAP49715 358 aaPredicted RBP27.19■■□□□ 1.94
PCSK6-215ENST00000611967 ZSCAN30Q86W11 494 aa27.19■■□□□ 1.94
PCSK6-215ENST00000611967 XPCQ01831 940 aaPredicted RBP27.19■■□□□ 1.94
PCSK6-215ENST00000611967 CCDC173Q0VFZ6 552 aa27.19■■□□□ 1.94
PCSK6-215ENST00000611967 ZNF692Q9BU19 519 aaPredicted RBP27.19■■□□□ 1.94
PCSK6-215ENST00000611967 AAMPQ13685 434 aa27.18■■□□□ 1.94
PCSK6-215ENST00000611967 STK26Q9P289 416 aa27.18■■□□□ 1.94
PCSK6-215ENST00000611967 WDR63Q8IWG1 891 aa27.18■■□□□ 1.94
PCSK6-215ENST00000611967 CALD1Q05682 793 aaKnown RBP27.17■■□□□ 1.94
PCSK6-215ENST00000611967 ISY1Q9ULR0 285 aaKnown RBP27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms