RNA–Protein interactions for RNA: ENST00000610452.1

COL15A1-205, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL15A1, Length 5,422 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-205ENST00000610452 LMOD2Q6P5Q4 547 aa24.25■■□□□ 1.47
COL15A1-205ENST00000610452 GIMAP7Q8NHV1 300 aa24.25■■□□□ 1.47
COL15A1-205ENST00000610452 K7ELQ4 463 aaPredicted RBP24.25■■□□□ 1.47
COL15A1-205ENST00000610452 CCDC27Q2M243 656 aa24.24■■□□□ 1.47
COL15A1-205ENST00000610452 SMG6Q86US8 1419 aaKnown RBP24.24■■□□□ 1.47
COL15A1-205ENST00000610452 PPP4R3BQ5MIZ7 849 aa24.24■■□□□ 1.47
COL15A1-205ENST00000610452 WASHC2AQ641Q2 1341 aa24.24■■□□□ 1.47
COL15A1-205ENST00000610452 ERLIN1O75477 346 aa24.23■■□□□ 1.47
COL15A1-205ENST00000610452 MCM2P49736 904 aa24.23■■□□□ 1.47
COL15A1-205ENST00000610452 C11orf95C9JLR9 678 aaPredicted RBP24.22■■□□□ 1.47
COL15A1-205ENST00000610452 GGT6Q6P531 493 aa24.22■■□□□ 1.47
COL15A1-205ENST00000610452 FIBPO43427 364 aa24.22■■□□□ 1.47
COL15A1-205ENST00000610452 BRD4O60885 1362 aaPredicted RBP24.22■■□□□ 1.47
COL15A1-205ENST00000610452 NEK4P51957 841 aa24.21■■□□□ 1.47
COL15A1-205ENST00000610452 RNF20Q5VTR2 975 aa24.21■■□□□ 1.47
COL15A1-205ENST00000610452 CPLX2Q6PUV4 134 aaKnown RBP24.21■■□□□ 1.47
COL15A1-205ENST00000610452 GPATCH11Q8N954 259 aa24.21■■□□□ 1.47
COL15A1-205ENST00000610452 TOMM22Q9NS69 142 aa24.21■■□□□ 1.47
COL15A1-205ENST00000610452 API5Q9BZZ5 524 aaKnown RBP24.21■■□□□ 1.47
COL15A1-205ENST00000610452 TTLL5Q6EMB2 1281 aa24.2■■□□□ 1.47
COL15A1-205ENST00000610452 OLFM4Q6UX06 510 aa24.2■■□□□ 1.46
COL15A1-205ENST00000610452 HNRNPMP52272 730 aaKnown RBP eCLIP24.2■■□□□ 1.46
COL15A1-205ENST00000610452 SMARCA2P51531 1590 aa24.19■■□□□ 1.46
COL15A1-205ENST00000610452 TRIM29Q14134 588 aa24.19■■□□□ 1.46
COL15A1-205ENST00000610452 DHX8Q14562 1220 aaKnown RBP24.19■■□□□ 1.46
COL15A1-205ENST00000610452 TIGD1Q96MW7 591 aa24.18■■□□□ 1.46
COL15A1-205ENST00000610452 NAP1L1P55209 391 aaKnown RBP24.17■■□□□ 1.46
COL15A1-205ENST00000610452 TMCO3Q6UWJ1 677 aa24.17■■□□□ 1.46
COL15A1-205ENST00000610452 TERF2IPQ9NYB0 399 aa24.17■■□□□ 1.46
COL15A1-205ENST00000610452 CPLX1O14810 134 aa24.17■■□□□ 1.46
COL15A1-205ENST00000610452 KINO60870 393 aaKnown RBP24.16■■□□□ 1.46
COL15A1-205ENST00000610452 UBXN4Q92575 508 aa24.16■■□□□ 1.46
COL15A1-205ENST00000610452 SPDYE4A6NLX3 237 aa24.15■■□□□ 1.46
COL15A1-205ENST00000610452 CARMIL2Q6F5E8 1435 aa24.15■■□□□ 1.46
COL15A1-205ENST00000610452 FMNL2Q96PY5 1086 aa24.15■■□□□ 1.46
COL15A1-205ENST00000610452 PDE3AQ14432 1141 aa24.15■■□□□ 1.46
COL15A1-205ENST00000610452 SYCE3A1L190 88 aa24.14■■□□□ 1.46
COL15A1-205ENST00000610452 SYNE3Q6ZMZ3 975 aa24.14■■□□□ 1.46
COL15A1-205ENST00000610452 DNAJC2Q99543 621 aaKnown RBP24.14■■□□□ 1.45
COL15A1-205ENST00000610452 AKAP17AQ02040 695 aaKnown RBP24.14■■□□□ 1.45
COL15A1-205ENST00000610452 FOSBP53539 338 aa24.13■■□□□ 1.45
COL15A1-205ENST00000610452 MCM5P33992 734 aa24.13■■□□□ 1.45
COL15A1-205ENST00000610452 CENPHQ9H3R5 247 aa24.13■■□□□ 1.45
COL15A1-205ENST00000610452 IRX3P78415 501 aaPredicted RBP24.13■■□□□ 1.45
COL15A1-205ENST00000610452 EFCAB2Q5VUJ9 269 aa24.13■■□□□ 1.45
COL15A1-205ENST00000610452 ROCK1Q13464 1354 aa24.13■■□□□ 1.45
COL15A1-205ENST00000610452 GTF2F1P35269 517 aaKnown RBP eCLIP24.12■■□□□ 1.45
COL15A1-205ENST00000610452 CCDC102AQ96A19 550 aa24.12■■□□□ 1.45
COL15A1-205ENST00000610452 RUNDC1Q96C34 613 aa24.11■■□□□ 1.45
COL15A1-205ENST00000610452 CCDC47Q96A33 483 aaKnown RBP24.11■■□□□ 1.45
COL15A1-205ENST00000610452 GOLGA6L7A0A1B0GV03 622 aa24.11■■□□□ 1.45
COL15A1-205ENST00000610452 IPO4Q8TEX9 1081 aaKnown RBP24.11■■□□□ 1.45
COL15A1-205ENST00000610452 WDR33Q9C0J8 1336 aaKnown RBP24.11■■□□□ 1.45
COL15A1-205ENST00000610452 TNMDQ9H2S6 317 aa24.1■■□□□ 1.45
COL15A1-205ENST00000610452 NBPF1Q3BBV0 1214 aa24.1■■□□□ 1.45
COL15A1-205ENST00000610452 ADAMTS8Q9UP79 889 aa24.1■■□□□ 1.45
COL15A1-205ENST00000610452 CCDC144AA2RUR9 1427 aa24.09■■□□□ 1.45
COL15A1-205ENST00000610452 RSPH4AQ5TD94 716 aa24.09■■□□□ 1.45
COL15A1-205ENST00000610452 PDCP20941 246 aa24.09■■□□□ 1.45
COL15A1-205ENST00000610452 MARCH6O60337 910 aa24.09■■□□□ 1.45
COL15A1-205ENST00000610452 FAM177A1Q8N128 213 aaPredicted RBP24.08■■□□□ 1.45
COL15A1-205ENST00000610452 GTPBP4Q9BZE4 634 aaKnown RBP24.07■■□□□ 1.44
COL15A1-205ENST00000610452 HDGFP51858 240 aaKnown RBP24.07■■□□□ 1.44
COL15A1-205ENST00000610452 KIF2AO00139 706 aaPredicted RBP24.06■■□□□ 1.44
COL15A1-205ENST00000610452 KIF3BO15066 747 aa24.06■■□□□ 1.44
COL15A1-205ENST00000610452 IFIT2P09913 472 aaKnown RBP24.06■■□□□ 1.44
COL15A1-205ENST00000610452 GTF2A1P52655 376 aaPredicted RBP24.06■■□□□ 1.44
COL15A1-205ENST00000610452 SMARCE1Q969G3 411 aa24.06■■□□□ 1.44
COL15A1-205ENST00000610452 PRIMPOLQ96LW4 560 aa24.06■■□□□ 1.44
COL15A1-205ENST00000610452 PTPN14Q15678 1187 aa24.06■■□□□ 1.44
COL15A1-205ENST00000610452 POLR3GO15318 223 aaPredicted RBP24.06■■□□□ 1.44
COL15A1-205ENST00000610452 NOL10Q9BSC4 688 aaKnown RBP24.05■■□□□ 1.44
COL15A1-205ENST00000610452 DYDC1Q8WWB3 177 aa24.05■■□□□ 1.44
COL15A1-205ENST00000610452 FILIP1Q7Z7B0 1213 aa24.05■■□□□ 1.44
COL15A1-205ENST00000610452 GOLGA6L10A6NI86 522 aa24.04■■□□□ 1.44
COL15A1-205ENST00000610452 RIPK4P57078 832 aa24.04■■□□□ 1.44
COL15A1-205ENST00000610452 DHX37Q8IY37 1157 aaKnown RBP24.04■■□□□ 1.44
COL15A1-205ENST00000610452 CCDC9Q9Y3X0 531 aaKnown RBP24.04■■□□□ 1.44
COL15A1-205ENST00000610452 XRCC6P12956 609 aaKnown RBP eCLIP24.04■■□□□ 1.44
COL15A1-205ENST00000610452 TRAK1Q9UPV9 953 aa24.04■■□□□ 1.44
COL15A1-205ENST00000610452 UACAQ9BZF9 1416 aa24.04■■□□□ 1.44
COL15A1-205ENST00000610452 ERCC6Q03468 1493 aa24.04■■□□□ 1.44
COL15A1-205ENST00000610452 LRRCC1Q9C099 1032 aa24.03■■□□□ 1.44
COL15A1-205ENST00000610452 SERPINC1P01008 464 aa24.03■■□□□ 1.44
COL15A1-205ENST00000610452 KIF18AQ8NI77 898 aa24.02■■□□□ 1.44
COL15A1-205ENST00000610452 FAM193AP78312 1265 aa24.02■■□□□ 1.44
COL15A1-205ENST00000610452 BCAR3O75815 825 aa24.01■■□□□ 1.43
COL15A1-205ENST00000610452 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.01■■□□□ 1.43
COL15A1-205ENST00000610452 PSMA5P28066 241 aa24.01■■□□□ 1.43
COL15A1-205ENST00000610452 FILIP1LQ4L180 1135 aa24.01■■□□□ 1.43
COL15A1-205ENST00000610452 RBM25P49756 843 aaKnown RBP24■■□□□ 1.43
COL15A1-205ENST00000610452 PNISRQ8TF01 805 aaKnown RBP24■■□□□ 1.43
COL15A1-205ENST00000610452 INCENPQ9NQS7 918 aa24■■□□□ 1.43
COL15A1-205ENST00000610452 GCC1Q96CN9 775 aa24■■□□□ 1.43
COL15A1-205ENST00000610452 MYO6Q9UM54 1294 aa24■■□□□ 1.43
COL15A1-205ENST00000610452 SHTN1A0MZ66 631 aa24■■□□□ 1.43
COL15A1-205ENST00000610452 PLCD3Q8N3E9 789 aa24■■□□□ 1.43
COL15A1-205ENST00000610452 KIF21BO75037 1637 aa23.99■■□□□ 1.43
COL15A1-205ENST00000610452 TNNT1P13805 278 aa23.99■■□□□ 1.43
COL15A1-205ENST00000610452 FAM107BQ9H098 131 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms