RNA–Protein interactions for RNA: ENST00000609795.5

HNF4A-208, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,192 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-208ENST00000609795 SAFB2Q14151 953 aaKnown RBP eCLIP25.43■■□□□ 1.66
HNF4A-208ENST00000609795 TOM1O60784 492 aa25.4■■□□□ 1.66
HNF4A-208ENST00000609795 ATF3P18847 181 aa25.4■■□□□ 1.66
HNF4A-208ENST00000609795 UBAP1LF5GYI3 381 aa25.39■■□□□ 1.66
HNF4A-208ENST00000609795 EIF3AQ14152 1382 aaKnown RBP25.39■■□□□ 1.65
HNF4A-208ENST00000609795 CENPJQ9HC77 1338 aaPredicted RBP25.38■■□□□ 1.65
HNF4A-208ENST00000609795 CADPS2Q86UW7 1296 aa25.38■■□□□ 1.65
HNF4A-208ENST00000609795 DCCP43146 1447 aa25.37■■□□□ 1.65
HNF4A-208ENST00000609795 MINK1Q8N4C8 1332 aaPredicted RBP25.37■■□□□ 1.65
HNF4A-208ENST00000609795 QRICH2Q9H0J4 1663 aa25.34■■□□□ 1.65
HNF4A-208ENST00000609795 CDC42BPGQ6DT37 1551 aa25.33■■□□□ 1.65
HNF4A-208ENST00000609795 HIRIP3Q9BW71 556 aaPredicted RBP25.33■■□□□ 1.65
HNF4A-208ENST00000609795 ADGRB2O60241 1585 aa25.32■■□□□ 1.64
HNF4A-208ENST00000609795 SLAIN2Q9P270 581 aa25.32■■□□□ 1.64
HNF4A-208ENST00000609795 USP47Q96K76 1375 aa25.31■■□□□ 1.64
HNF4A-208ENST00000609795 FMN2Q9NZ56 1722 aa25.29■■□□□ 1.64
HNF4A-208ENST00000609795 ST20-MTHFSA0A0A6YYL1 179 aa25.28■■□□□ 1.64
HNF4A-208ENST00000609795 WASLO00401 505 aaPredicted RBP25.28■■□□□ 1.64
HNF4A-208ENST00000609795 ZEB1P37275 1124 aaPredicted RBP25.28■■□□□ 1.64
HNF4A-208ENST00000609795 PIP4K2BP78356 416 aa25.28■■□□□ 1.64
HNF4A-208ENST00000609795 FBXO41Q8TF61 875 aa25.28■■□□□ 1.64
HNF4A-208ENST00000609795 MST1RQ04912 1400 aa25.28■■□□□ 1.64
HNF4A-208ENST00000609795 CDK19Q9BWU1 502 aa25.25■■□□□ 1.63
HNF4A-208ENST00000609795 SCAF1Q9H7N4 1312 aaKnown RBP25.25■■□□□ 1.63
HNF4A-208ENST00000609795 SBNO2Q9Y2G9 1366 aa25.24■■□□□ 1.63
HNF4A-208ENST00000609795 NUTM2FA1L443 756 aa25.24■■□□□ 1.63
HNF4A-208ENST00000609795 EIF4G2P78344 907 aaKnown RBP eCLIP25.24■■□□□ 1.63
HNF4A-208ENST00000609795 C1orf167Q5SNV9 1468 aa25.23■■□□□ 1.63
HNF4A-208ENST00000609795 EVC2Q86UK5 1308 aa25.22■■□□□ 1.63
HNF4A-208ENST00000609795 RGPD8O14715 1765 aaPredicted RBP25.21■■□□□ 1.63
HNF4A-208ENST00000609795 SLC24A1O60721 1099 aa25.21■■□□□ 1.63
HNF4A-208ENST00000609795 TESK2Q96S53 571 aa25.21■■□□□ 1.63
HNF4A-208ENST00000609795 ROBO1Q9Y6N7 1651 aa25.2■■□□□ 1.63
HNF4A-208ENST00000609795 TULP4Q9NRJ4 1543 aa25.19■■□□□ 1.62
HNF4A-208ENST00000609795 ANKARQ7Z5J8 1434 aa25.19■■□□□ 1.62
HNF4A-208ENST00000609795 USP32Q8NFA0 1604 aa25.19■■□□□ 1.62
HNF4A-208ENST00000609795 HSPA5P11021 654 aaKnown RBP25.18■■□□□ 1.62
HNF4A-208ENST00000609795 SRPK2P78362 688 aaKnown RBP25.18■■□□□ 1.62
HNF4A-208ENST00000609795 ESCO1Q5FWF5 840 aa25.18■■□□□ 1.62
HNF4A-208ENST00000609795 BRINP3Q76B58 766 aa25.18■■□□□ 1.62
HNF4A-208ENST00000609795 ORAI2Q96SN7 254 aa25.18■■□□□ 1.62
HNF4A-208ENST00000609795 NUDT16Q96DE0 195 aaKnown RBP25.17■■□□□ 1.62
HNF4A-208ENST00000609795 CABP2Q9NPB3 220 aa25.17■■□□□ 1.62
HNF4A-208ENST00000609795 PRR36Q9H6K5 1346 aa25.16■■□□□ 1.62
HNF4A-208ENST00000609795 TMF1P82094 1093 aa25.12■■□□□ 1.61
HNF4A-208ENST00000609795 CCDC61Q9Y6R9 512 aa25.12■■□□□ 1.61
HNF4A-208ENST00000609795 ATP7BP35670 1465 aa25.12■■□□□ 1.61
HNF4A-208ENST00000609795 ITSN1Q15811 1721 aa25.12■■□□□ 1.61
HNF4A-208ENST00000609795 PHF8Q9UPP1 1060 aa25.11■■□□□ 1.61
HNF4A-208ENST00000609795 KIF1AQ12756 1690 aa25.1■■□□□ 1.61
HNF4A-208ENST00000609795 PUS7Q96PZ0 661 aaKnown RBP25.09■■□□□ 1.61
HNF4A-208ENST00000609795 PMFBP1Q8TBY8 1022 aa25.08■■□□□ 1.61
HNF4A-208ENST00000609795 TOPAZ1Q8N9V7 1692 aa25.07■■□□□ 1.6
HNF4A-208ENST00000609795 DISP3Q9P2K9 1392 aa25.07■■□□□ 1.6
HNF4A-208ENST00000609795 NHSL1Q5SYE7 1610 aa25.07■■□□□ 1.6
HNF4A-208ENST00000609795 ATAD2Q6PL18 1390 aa25.06■■□□□ 1.6
HNF4A-208ENST00000609795 FOXO3O43524 673 aa25.06■■□□□ 1.6
HNF4A-208ENST00000609795 ILDR1Q86SU0 546 aaPredicted RBP25.06■■□□□ 1.6
HNF4A-208ENST00000609795 AHDC1Q5TGY3 1603 aaPredicted RBP25.05■■□□□ 1.6
HNF4A-208ENST00000609795 PLEKHG3A1L390 1219 aa25.05■■□□□ 1.6
HNF4A-208ENST00000609795 HSPA1LP34931 641 aa25.05■■□□□ 1.6
HNF4A-208ENST00000609795 CDCA8Q53HL2 280 aa25.05■■□□□ 1.6
HNF4A-208ENST00000609795 DDX17Q92841 729 aaKnown RBP25.05■■□□□ 1.6
HNF4A-208ENST00000609795 PHLPP1O60346 1717 aa25.05■■□□□ 1.6
HNF4A-208ENST00000609795 PPIP5K1Q6PFW1 1433 aa25.04■■□□□ 1.6
HNF4A-208ENST00000609795 CABP1Q9NZU7 370 aa25.04■■□□□ 1.6
HNF4A-208ENST00000609795 NPHP3Q7Z494 1330 aa25.03■■□□□ 1.6
HNF4A-208ENST00000609795 NGDNQ8NEJ9 315 aaKnown RBP25.02■■□□□ 1.6
HNF4A-208ENST00000609795 PSME1Q06323 249 aa25■■□□□ 1.59
HNF4A-208ENST00000609795 ACEP12821 1306 aa24.99■■□□□ 1.59
HNF4A-208ENST00000609795 SOS2Q07890 1332 aaPredicted RBP24.99■■□□□ 1.59
HNF4A-208ENST00000609795 KRT28Q7Z3Y7 464 aa24.99■■□□□ 1.59
HNF4A-208ENST00000609795 POLR3AO14802 1390 aaPredicted RBP24.98■■□□□ 1.59
HNF4A-208ENST00000609795 TMC1Q8TDI8 760 aa24.98■■□□□ 1.59
HNF4A-208ENST00000609795 COL16A1Q07092 1604 aaPredicted RBP24.97■■□□□ 1.59
HNF4A-208ENST00000609795 XPCQ01831 940 aaPredicted RBP24.97■■□□□ 1.59
HNF4A-208ENST00000609795 C11orf95C9JLR9 678 aaPredicted RBP24.96■■□□□ 1.59
HNF4A-208ENST00000609795 SLC12A5Q9H2X9 1139 aa24.96■■□□□ 1.59
HNF4A-208ENST00000609795 PXDNQ92626 1479 aa24.96■■□□□ 1.59
HNF4A-208ENST00000609795 LRRC59Q96AG4 307 aaKnown RBP24.95■■□□□ 1.58
HNF4A-208ENST00000609795 NINLQ9Y2I6 1382 aa24.93■■□□□ 1.58
HNF4A-208ENST00000609795 POLR3GLQ9BT43 218 aa24.93■■□□□ 1.58
HNF4A-208ENST00000609795 ZNF692Q9BU19 519 aaPredicted RBP24.93■■□□□ 1.58
HNF4A-208ENST00000609795 AKAP12Q02952 1782 aa24.92■■□□□ 1.58
HNF4A-208ENST00000609795 CPSF1Q10570 1443 aaKnown RBP24.9■■□□□ 1.58
HNF4A-208ENST00000609795 TERF2IPQ9NYB0 399 aa24.9■■□□□ 1.58
HNF4A-208ENST00000609795 HDGFL2Q7Z4V5 671 aaPredicted RBP24.89■■□□□ 1.58
HNF4A-208ENST00000609795 SBNO1A3KN83 1393 aa24.89■■□□□ 1.57
HNF4A-208ENST00000609795 TRPM3Q9HCF6 1732 aaPredicted RBP24.89■■□□□ 1.57
HNF4A-208ENST00000609795 CD163L1Q9NR16 1453 aa24.89■■□□□ 1.57
HNF4A-208ENST00000609795 MYOM1P52179 1685 aa24.88■■□□□ 1.57
HNF4A-208ENST00000609795 KIF7Q2M1P5 1343 aa24.87■■□□□ 1.57
HNF4A-208ENST00000609795 SPATA31A3Q5VYP0 1347 aa24.87■■□□□ 1.57
HNF4A-208ENST00000609795 PAK3O75914 559 aaPredicted RBP24.87■■□□□ 1.57
HNF4A-208ENST00000609795 JCADQ9P266 1359 aa24.87■■□□□ 1.57
HNF4A-208ENST00000609795 USP6P35125 1406 aa24.86■■□□□ 1.57
HNF4A-208ENST00000609795 BRD4O60885 1362 aaPredicted RBP24.86■■□□□ 1.57
HNF4A-208ENST00000609795 KTN1Q86UP2 1357 aaKnown RBP24.86■■□□□ 1.57
HNF4A-208ENST00000609795 MON2Q7Z3U7 1717 aa24.85■■□□□ 1.57
HNF4A-208ENST00000609795 A0A1W2PP64 1363 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms