RNA–Protein interactions for RNA: ENST00000607836.1

AC009961.1-203, humanhuman

TSL 1 (best) BASIC

Gene AC009961.1, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009961.1-203ENST00000607836 NPC1L1Q9UHC9 1359 aa20.29■□□□□ 0.84
AC009961.1-203ENST00000607836 CCDC136Q96JN2 1154 aa20.28■□□□□ 0.84
AC009961.1-203ENST00000607836 PDE3BQ13370 1112 aa20.28■□□□□ 0.84
AC009961.1-203ENST00000607836 WAPLQ7Z5K2 1190 aa20.27■□□□□ 0.84
AC009961.1-203ENST00000607836 EXOC6Q8TAG9 804 aa20.27■□□□□ 0.84
AC009961.1-203ENST00000607836 NEUROD2Q15784 382 aa20.24■□□□□ 0.83
AC009961.1-203ENST00000607836 YTHDC2Q9H6S0 1430 aaKnown RBP20.24■□□□□ 0.83
AC009961.1-203ENST00000607836 SPINK5Q9NQ38 1064 aaPredicted RBP20.23■□□□□ 0.83
AC009961.1-203ENST00000607836 ZFYVE9O95405 1425 aa20.23■□□□□ 0.83
AC009961.1-203ENST00000607836 MTHFSP49914 203 aa20.23■□□□□ 0.83
AC009961.1-203ENST00000607836 GGNBP2Q9H3C7 697 aa20.22■□□□□ 0.83
AC009961.1-203ENST00000607836 ZMYM3Q14202 1370 aa20.22■□□□□ 0.83
AC009961.1-203ENST00000607836 DMRT2Q9Y5R5 561 aa20.22■□□□□ 0.83
AC009961.1-203ENST00000607836 CGNL1Q0VF96 1302 aa20.22■□□□□ 0.83
AC009961.1-203ENST00000607836 AGLP35573 1532 aa20.22■□□□□ 0.83
AC009961.1-203ENST00000607836 A2ML1A8K2U0 1454 aa20.21■□□□□ 0.83
AC009961.1-203ENST00000607836 RRP7AQ9Y3A4 280 aaKnown RBP20.21■□□□□ 0.83
AC009961.1-203ENST00000607836 ALKQ9UM73 1620 aa20.21■□□□□ 0.83
AC009961.1-203ENST00000607836 PTPRMP28827 1452 aa20.2■□□□□ 0.83
AC009961.1-203ENST00000607836 CEBPAP49715 358 aaPredicted RBP20.2■□□□□ 0.82
AC009961.1-203ENST00000607836 RIMS2Q9UQ26 1411 aa20.2■□□□□ 0.82
AC009961.1-203ENST00000607836 A0A1W2PP64 1363 aa20.19■□□□□ 0.82
AC009961.1-203ENST00000607836 GOLGA2Q08379 1002 aa20.19■□□□□ 0.82
AC009961.1-203ENST00000607836 DUSP27Q5VZP5 1158 aa20.19■□□□□ 0.82
AC009961.1-203ENST00000607836 CDK19Q9BWU1 502 aa20.19■□□□□ 0.82
AC009961.1-203ENST00000607836 PPP6R1Q9UPN7 881 aa20.19■□□□□ 0.82
AC009961.1-203ENST00000607836 ANKRD36BQ8N2N9 1353 aa20.18■□□□□ 0.82
AC009961.1-203ENST00000607836 ARHGEF40Q8TER5 1519 aa20.18■□□□□ 0.82
AC009961.1-203ENST00000607836 C20orf194Q5TEA3 1177 aa20.18■□□□□ 0.82
AC009961.1-203ENST00000607836 CABP1Q9NZU7 370 aa20.17■□□□□ 0.82
AC009961.1-203ENST00000607836 REREQ9P2R6 1566 aa20.17■□□□□ 0.82
AC009961.1-203ENST00000607836 INSRP06213 1382 aa20.17■□□□□ 0.82
AC009961.1-203ENST00000607836 ZNF521Q96K83 1311 aa20.17■□□□□ 0.82
AC009961.1-203ENST00000607836 FBLN1P23142 703 aa20.16■□□□□ 0.82
AC009961.1-203ENST00000607836 TXNDC2Q86VQ3 553 aa20.16■□□□□ 0.82
AC009961.1-203ENST00000607836 SPATA31D1Q6ZQQ2 1576 aa20.14■□□□□ 0.82
AC009961.1-203ENST00000607836 POLR3AO14802 1390 aaPredicted RBP20.13■□□□□ 0.81
AC009961.1-203ENST00000607836 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.13■□□□□ 0.81
AC009961.1-203ENST00000607836 METP08581 1390 aa20.13■□□□□ 0.81
AC009961.1-203ENST00000607836 SLFN5Q08AF3 891 aa20.13■□□□□ 0.81
AC009961.1-203ENST00000607836 CRBNQ96SW2 442 aa20.13■□□□□ 0.81
AC009961.1-203ENST00000607836 NCKAP5LQ9HCH0 1330 aa20.13■□□□□ 0.81
AC009961.1-203ENST00000607836 FYB1O15117 783 aa20.11■□□□□ 0.81
AC009961.1-203ENST00000607836 TRHP20396 242 aaPredicted RBP20.11■□□□□ 0.81
AC009961.1-203ENST00000607836 U2AF1L5P0DN76 240 aaPredicted RBP20.1■□□□□ 0.81
AC009961.1-203ENST00000607836 U2AF1Q01081 240 aaKnown RBP eCLIP20.1■□□□□ 0.81
AC009961.1-203ENST00000607836 SKAP1Q86WV1 359 aa20.09■□□□□ 0.81
AC009961.1-203ENST00000607836 PUS7Q96PZ0 661 aaKnown RBP20.09■□□□□ 0.81
AC009961.1-203ENST00000607836 TERF2IPQ9NYB0 399 aa20.09■□□□□ 0.81
AC009961.1-203ENST00000607836 TCP11L2Q8N4U5 519 aa20.09■□□□□ 0.81
AC009961.1-203ENST00000607836 U2SURPO15042 1029 aaKnown RBP20.08■□□□□ 0.81
AC009961.1-203ENST00000607836 ATAD2Q6PL18 1390 aa20.08■□□□□ 0.8
AC009961.1-203ENST00000607836 TNRQ92752 1358 aa20.08■□□□□ 0.8
AC009961.1-203ENST00000607836 CD163L1Q9NR16 1453 aa20.07■□□□□ 0.8
AC009961.1-203ENST00000607836 NUTM2FA1L443 756 aa20.07■□□□□ 0.8
AC009961.1-203ENST00000607836 PPM1GO15355 546 aaPredicted RBP20.07■□□□□ 0.8
AC009961.1-203ENST00000607836 BCAR3O75815 825 aa20.07■□□□□ 0.8
AC009961.1-203ENST00000607836 WWC1Q8IX03 1113 aa20.07■□□□□ 0.8
AC009961.1-203ENST00000607836 CFAP53Q96M91 514 aa20.07■□□□□ 0.8
AC009961.1-203ENST00000607836 SHPRHQ149N8 1683 aa20.06■□□□□ 0.8
AC009961.1-203ENST00000607836 ABCC11Q96J66 1382 aa20.06■□□□□ 0.8
AC009961.1-203ENST00000607836 HDGFL2Q7Z4V5 671 aaPredicted RBP20.06■□□□□ 0.8
AC009961.1-203ENST00000607836 RUNDC1Q96C34 613 aa20.05■□□□□ 0.8
AC009961.1-203ENST00000607836 LTKP29376 864 aa20.04■□□□□ 0.8
AC009961.1-203ENST00000607836 SLC26A8Q96RN1 970 aa20.04■□□□□ 0.8
AC009961.1-203ENST00000607836 TRMT2AQ8IZ69 625 aaKnown RBP20.03■□□□□ 0.8
AC009961.1-203ENST00000607836 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.03■□□□□ 0.8
AC009961.1-203ENST00000607836 ZRANB1Q9UGI0 708 aa20.03■□□□□ 0.8
AC009961.1-203ENST00000607836 USP32Q8NFA0 1604 aa20.02■□□□□ 0.79
AC009961.1-203ENST00000607836 NRXN3Q9Y4C0 1643 aa20.02■□□□□ 0.79
AC009961.1-203ENST00000607836 E9PSI1 815 aa20.01■□□□□ 0.79
AC009961.1-203ENST00000607836 SETD1AO15047 1707 aaKnown RBP20■□□□□ 0.79
AC009961.1-203ENST00000607836 NSD2O96028 1365 aa20■□□□□ 0.79
AC009961.1-203ENST00000607836 WASLO00401 505 aaPredicted RBP20■□□□□ 0.79
AC009961.1-203ENST00000607836 TMEM2Q9UHN6 1383 aa19.99■□□□□ 0.79
AC009961.1-203ENST00000607836 NINLQ9Y2I6 1382 aa19.99■□□□□ 0.79
AC009961.1-203ENST00000607836 NME9Q86XW9 330 aa19.98■□□□□ 0.79
AC009961.1-203ENST00000607836 BCL2L13Q9BXK5 485 aa19.98■□□□□ 0.79
AC009961.1-203ENST00000607836 NKTRP30414 1462 aaKnown RBP19.97■□□□□ 0.79
AC009961.1-203ENST00000607836 NUDT16Q96DE0 195 aaKnown RBP19.97■□□□□ 0.79
AC009961.1-203ENST00000607836 NLRP1Q9C000 1473 aa19.96■□□□□ 0.79
AC009961.1-203ENST00000607836 MSH5O43196 834 aa19.96■□□□□ 0.79
AC009961.1-203ENST00000607836 HDGFP51858 240 aaKnown RBP19.96■□□□□ 0.79
AC009961.1-203ENST00000607836 PPIP5K1Q6PFW1 1433 aa19.95■□□□□ 0.78
AC009961.1-203ENST00000607836 ROBO2Q9HCK4 1378 aa19.95■□□□□ 0.78
AC009961.1-203ENST00000607836 FRAT1Q92837 279 aaPredicted RBP19.94■□□□□ 0.78
AC009961.1-203ENST00000607836 EMILIN1Q9Y6C2 1016 aa19.93■□□□□ 0.78
AC009961.1-203ENST00000607836 UBR1Q8IWV7 1749 aa19.93■□□□□ 0.78
AC009961.1-203ENST00000607836 DLC1Q96QB1 1528 aa19.92■□□□□ 0.78
AC009961.1-203ENST00000607836 PRR36Q9H6K5 1346 aa19.92■□□□□ 0.78
AC009961.1-203ENST00000607836 TSR2Q969E8 191 aaKnown RBP19.92■□□□□ 0.78
AC009961.1-203ENST00000607836 IQSEC2Q5JU85 1478 aa19.92■□□□□ 0.78
AC009961.1-203ENST00000607836 POLKQ9UBT6 870 aa19.92■□□□□ 0.78
AC009961.1-203ENST00000607836 DIAPH1O60610 1272 aaKnown RBP19.91■□□□□ 0.78
AC009961.1-203ENST00000607836 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.91■□□□□ 0.78
AC009961.1-203ENST00000607836 TNNQ9UQP3 1299 aa19.91■□□□□ 0.78
AC009961.1-203ENST00000607836 ADAMTS13Q76LX8 1427 aa19.9■□□□□ 0.78
AC009961.1-203ENST00000607836 HMOX1P09601 288 aa19.9■□□□□ 0.78
AC009961.1-203ENST00000607836 CANXP27824 592 aaKnown RBP19.9■□□□□ 0.78
AC009961.1-203ENST00000607836 RRS1Q15050 365 aaKnown RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms