RNA–Protein interactions for RNA: ENST00000607632.1

PRDM16-210, Transcript of PR/SET domain 16, humanhuman

TSL 2

Gene PRDM16, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-210ENST00000607632 C1orf167Q5SNV9 1468 aa20.88■□□□□ 0.93
PRDM16-210ENST00000607632 PLEKHH1Q9ULM0 1364 aa20.87■□□□□ 0.93
PRDM16-210ENST00000607632 STK26Q9P289 416 aa20.86■□□□□ 0.93
PRDM16-210ENST00000607632 WAPLQ7Z5K2 1190 aa20.85■□□□□ 0.93
PRDM16-210ENST00000607632 KDM2AQ9Y2K7 1162 aa20.85■□□□□ 0.93
PRDM16-210ENST00000607632 FMN2Q9NZ56 1722 aa20.84■□□□□ 0.93
PRDM16-210ENST00000607632 SHPRHQ149N8 1683 aa20.83■□□□□ 0.92
PRDM16-210ENST00000607632 ADGRB2O60241 1585 aa20.82■□□□□ 0.92
PRDM16-210ENST00000607632 JCADQ9P266 1359 aa20.82■□□□□ 0.92
PRDM16-210ENST00000607632 ARHGEF28Q8N1W1 1705 aaKnown RBP20.8■□□□□ 0.92
PRDM16-210ENST00000607632 SIN3AQ96ST3 1273 aa20.78■□□□□ 0.92
PRDM16-210ENST00000607632 L3MBTL2Q969R5 705 aa20.77■□□□□ 0.92
PRDM16-210ENST00000607632 PRAM1Q96QH2 718 aa20.77■□□□□ 0.92
PRDM16-210ENST00000607632 ORAI2Q96SN7 254 aa20.76■□□□□ 0.91
PRDM16-210ENST00000607632 TRAK1Q9UPV9 953 aa20.74■□□□□ 0.91
PRDM16-210ENST00000607632 SOS2Q07890 1332 aaPredicted RBP20.74■□□□□ 0.91
PRDM16-210ENST00000607632 KIF1AQ12756 1690 aa20.73■□□□□ 0.91
PRDM16-210ENST00000607632 TRPM1Q7Z4N2 1603 aa20.73■□□□□ 0.91
PRDM16-210ENST00000607632 SPATA31A6Q5VVP1 1343 aa20.73■□□□□ 0.91
PRDM16-210ENST00000607632 USP32Q8NFA0 1604 aa20.72■□□□□ 0.91
PRDM16-210ENST00000607632 RGPD8O14715 1765 aaPredicted RBP20.71■□□□□ 0.91
PRDM16-210ENST00000607632 ANKARQ7Z5J8 1434 aa20.7■□□□□ 0.9
PRDM16-210ENST00000607632 PXDNQ92626 1479 aa20.7■□□□□ 0.9
PRDM16-210ENST00000607632 DDX17Q92841 729 aaKnown RBP20.7■□□□□ 0.9
PRDM16-210ENST00000607632 LRRC59Q96AG4 307 aaKnown RBP20.7■□□□□ 0.9
PRDM16-210ENST00000607632 POGKQ9P215 609 aa20.7■□□□□ 0.9
PRDM16-210ENST00000607632 LRP6O75581 1613 aa20.7■□□□□ 0.9
PRDM16-210ENST00000607632 NBPF1Q3BBV0 1214 aa20.69■□□□□ 0.9
PRDM16-210ENST00000607632 NEUROD1Q13562 356 aa20.68■□□□□ 0.9
PRDM16-210ENST00000607632 PNPLA6Q8IY17 1366 aa20.68■□□□□ 0.9
PRDM16-210ENST00000607632 ESCO1Q5FWF5 840 aa20.67■□□□□ 0.9
PRDM16-210ENST00000607632 NPHP3Q7Z494 1330 aa20.67■□□□□ 0.9
PRDM16-210ENST00000607632 TULP4Q9NRJ4 1543 aa20.67■□□□□ 0.9
PRDM16-210ENST00000607632 COL22A1Q8NFW1 1626 aaPredicted RBP20.67■□□□□ 0.9
PRDM16-210ENST00000607632 SAFB2Q14151 953 aaKnown RBP eCLIP20.66■□□□□ 0.9
PRDM16-210ENST00000607632 EIF3AQ14152 1382 aaKnown RBP20.65■□□□□ 0.9
PRDM16-210ENST00000607632 RGS17Q9UGC6 210 aaPredicted RBP20.65■□□□□ 0.9
PRDM16-210ENST00000607632 NUTM2FA1L443 756 aa20.63■□□□□ 0.89
PRDM16-210ENST00000607632 WASLO00401 505 aaPredicted RBP20.63■□□□□ 0.89
PRDM16-210ENST00000607632 GPRASP1Q5JY77 1395 aa20.62■□□□□ 0.89
PRDM16-210ENST00000607632 MINK1Q8N4C8 1332 aaPredicted RBP20.62■□□□□ 0.89
PRDM16-210ENST00000607632 PHF23Q9BUL5 403 aaPredicted RBP20.62■□□□□ 0.89
PRDM16-210ENST00000607632 FOXO3O43524 673 aa20.61■□□□□ 0.89
PRDM16-210ENST00000607632 ATP7BP35670 1465 aa20.61■□□□□ 0.89
PRDM16-210ENST00000607632 PRR36Q9H6K5 1346 aa20.6■□□□□ 0.89
PRDM16-210ENST00000607632 NBPF8Q3BBV2 869 aa20.6■□□□□ 0.89
PRDM16-210ENST00000607632 HIRIP3Q9BW71 556 aaPredicted RBP20.6■□□□□ 0.89
PRDM16-210ENST00000607632 PHF8Q9UPP1 1060 aa20.6■□□□□ 0.89
PRDM16-210ENST00000607632 ITSN1Q15811 1721 aa20.59■□□□□ 0.89
PRDM16-210ENST00000607632 TONSLQ96HA7 1378 aa20.59■□□□□ 0.89
PRDM16-210ENST00000607632 TOPAZ1Q8N9V7 1692 aa20.58■□□□□ 0.89
PRDM16-210ENST00000607632 QRICH2Q9H0J4 1663 aa20.58■□□□□ 0.89
PRDM16-210ENST00000607632 RALGAPBQ86X10 1494 aa20.57■□□□□ 0.88
PRDM16-210ENST00000607632 CENPJQ9HC77 1338 aaPredicted RBP20.56■□□□□ 0.88
PRDM16-210ENST00000607632 TRPM3Q9HCF6 1732 aaPredicted RBP20.56■□□□□ 0.88
PRDM16-210ENST00000607632 ROCK2O75116 1388 aaKnown RBP20.56■□□□□ 0.88
PRDM16-210ENST00000607632 SPATA31A3Q5VYP0 1347 aa20.55■□□□□ 0.88
PRDM16-210ENST00000607632 CLSPNQ9HAW4 1339 aa20.55■□□□□ 0.88
PRDM16-210ENST00000607632 SBNO1A3KN83 1393 aa20.55■□□□□ 0.88
PRDM16-210ENST00000607632 TNS3Q68CZ2 1445 aa20.53■□□□□ 0.88
PRDM16-210ENST00000607632 KRT28Q7Z3Y7 464 aa20.53■□□□□ 0.88
PRDM16-210ENST00000607632 XPCQ01831 940 aaPredicted RBP20.52■□□□□ 0.88
PRDM16-210ENST00000607632 CDK19Q9BWU1 502 aa20.52■□□□□ 0.88
PRDM16-210ENST00000607632 PCGF6Q9BYE7 350 aa20.52■□□□□ 0.88
PRDM16-210ENST00000607632 MARF1Q9Y4F3 1742 aaKnown RBP20.52■□□□□ 0.88
PRDM16-210ENST00000607632 ALS2Q96Q42 1657 aa20.51■□□□□ 0.87
PRDM16-210ENST00000607632 POTEAQ6S8J7 498 aa20.51■□□□□ 0.87
PRDM16-210ENST00000607632 NUDT16Q96DE0 195 aaKnown RBP20.51■□□□□ 0.87
PRDM16-210ENST00000607632 NUTM2BA6NNL0 878 aaPredicted RBP20.5■□□□□ 0.87
PRDM16-210ENST00000607632 NUTM2EB1AL46 878 aaPredicted RBP20.5■□□□□ 0.87
PRDM16-210ENST00000607632 PSME1Q06323 249 aa20.5■□□□□ 0.87
PRDM16-210ENST00000607632 NUTM2AQ8IVF1 878 aaPredicted RBP20.5■□□□□ 0.87
PRDM16-210ENST00000607632 SBNO2Q9Y2G9 1366 aa20.49■□□□□ 0.87
PRDM16-210ENST00000607632 MEX3CQ5U5Q3 659 aaKnown RBP20.49■□□□□ 0.87
PRDM16-210ENST00000607632 PMFBP1Q8TBY8 1022 aa20.49■□□□□ 0.87
PRDM16-210ENST00000607632 POLR3AO14802 1390 aaPredicted RBP20.48■□□□□ 0.87
PRDM16-210ENST00000607632 ABCA3Q99758 1704 aa20.48■□□□□ 0.87
PRDM16-210ENST00000607632 ZNF772Q68DY9 489 aaPredicted RBP20.47■□□□□ 0.87
PRDM16-210ENST00000607632 CCDC61Q9Y6R9 512 aa20.47■□□□□ 0.87
PRDM16-210ENST00000607632 ARHGEF10O15013 1369 aa20.46■□□□□ 0.87
PRDM16-210ENST00000607632 PLEKHG3A1L390 1219 aa20.46■□□□□ 0.87
PRDM16-210ENST00000607632 TIMELESSQ9UNS1 1208 aa20.46■□□□□ 0.87
PRDM16-210ENST00000607632 CRYBG1Q9Y4K1 1723 aa20.44■□□□□ 0.86
PRDM16-210ENST00000607632 AFF2P51816 1311 aa20.44■□□□□ 0.86
PRDM16-210ENST00000607632 CARD11Q9BXL7 1154 aa20.43■□□□□ 0.86
PRDM16-210ENST00000607632 FNBP4Q8N3X1 1017 aaPredicted RBP20.42■□□□□ 0.86
PRDM16-210ENST00000607632 C8orf37Q96NL8 207 aa20.42■□□□□ 0.86
PRDM16-210ENST00000607632 ADAMTS2O95450 1211 aa20.41■□□□□ 0.86
PRDM16-210ENST00000607632 NGDNQ8NEJ9 315 aaKnown RBP20.41■□□□□ 0.86
PRDM16-210ENST00000607632 EVC2Q86UK5 1308 aa20.41■□□□□ 0.86
PRDM16-210ENST00000607632 PPIP5K1Q6PFW1 1433 aa20.41■□□□□ 0.86
PRDM16-210ENST00000607632 ACEP12821 1306 aa20.4■□□□□ 0.86
PRDM16-210ENST00000607632 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.4■□□□□ 0.86
PRDM16-210ENST00000607632 CABP2Q9NPB3 220 aa20.4■□□□□ 0.86
PRDM16-210ENST00000607632 CDK12Q9NYV4 1490 aaPredicted RBP20.39■□□□□ 0.85
PRDM16-210ENST00000607632 SRPK2P78362 688 aaKnown RBP20.39■□□□□ 0.85
PRDM16-210ENST00000607632 SLIT2O94813 1529 aa20.38■□□□□ 0.85
PRDM16-210ENST00000607632 BRD4O60885 1362 aaPredicted RBP20.38■□□□□ 0.85
PRDM16-210ENST00000607632 NGLY1Q96IV0 654 aa20.37■□□□□ 0.85
PRDM16-210ENST00000607632 BCL9LQ86UU0 1499 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms