RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 PLEKHH1Q9ULM0 1364 aa26■■□□□ 1.75
TUBB4B-202ENST00000604929 ABCC11Q96J66 1382 aa26■■□□□ 1.75
TUBB4B-202ENST00000604929 NLRP13Q86W25 1043 aa26■■□□□ 1.75
TUBB4B-202ENST00000604929 PNISRQ8TF01 805 aaKnown RBP26■■□□□ 1.75
TUBB4B-202ENST00000604929 PLEKHG1Q9ULL1 1385 aa25.98■■□□□ 1.75
TUBB4B-202ENST00000604929 PUS7Q96PZ0 661 aaKnown RBP25.98■■□□□ 1.75
TUBB4B-202ENST00000604929 CDK19Q9BWU1 502 aa25.98■■□□□ 1.75
TUBB4B-202ENST00000604929 BRD4O60885 1362 aaPredicted RBP25.98■■□□□ 1.75
TUBB4B-202ENST00000604929 ADAMTS13Q76LX8 1427 aa25.96■■□□□ 1.75
TUBB4B-202ENST00000604929 ADAMTSL3P82987 1691 aa25.96■■□□□ 1.75
TUBB4B-202ENST00000604929 SLIT1O75093 1534 aa25.94■■□□□ 1.74
TUBB4B-202ENST00000604929 ARHGAP23Q9P227 1491 aa25.93■■□□□ 1.74
TUBB4B-202ENST00000604929 DLC1Q96QB1 1528 aa25.92■■□□□ 1.74
TUBB4B-202ENST00000604929 SENP3-EIF4A1A0A087X0R7 540 aa25.92■■□□□ 1.74
TUBB4B-202ENST00000604929 PPP2R1AP30153 589 aa25.91■■□□□ 1.74
TUBB4B-202ENST00000604929 NSD3Q9BZ95 1437 aa25.9■■□□□ 1.74
TUBB4B-202ENST00000604929 CEP170BQ9Y4F5 1589 aaPredicted RBP25.89■■□□□ 1.73
TUBB4B-202ENST00000604929 NPC1L1Q9UHC9 1359 aa25.88■■□□□ 1.73
TUBB4B-202ENST00000604929 SIRT1Q96EB6 747 aa25.87■■□□□ 1.73
TUBB4B-202ENST00000604929 CABP1Q9NZU7 370 aa25.87■■□□□ 1.73
TUBB4B-202ENST00000604929 TBX22Q9Y458 520 aa25.87■■□□□ 1.73
TUBB4B-202ENST00000604929 ROBO2Q9HCK4 1378 aa25.86■■□□□ 1.73
TUBB4B-202ENST00000604929 ATAD2Q6PL18 1390 aa25.86■■□□□ 1.73
TUBB4B-202ENST00000604929 AMOTL2Q9Y2J4 779 aa25.85■■□□□ 1.73
TUBB4B-202ENST00000604929 ANKRD36BQ8N2N9 1353 aa25.85■■□□□ 1.73
TUBB4B-202ENST00000604929 MED14O60244 1454 aa25.85■■□□□ 1.73
TUBB4B-202ENST00000604929 WASLO00401 505 aaPredicted RBP25.85■■□□□ 1.73
TUBB4B-202ENST00000604929 TECPR2O15040 1411 aa25.84■■□□□ 1.73
TUBB4B-202ENST00000604929 FAM135BQ49AJ0 1406 aa25.83■■□□□ 1.73
TUBB4B-202ENST00000604929 PTPRUQ92729 1446 aa25.83■■□□□ 1.73
TUBB4B-202ENST00000604929 TNNT2P45379 298 aaPredicted RBP25.83■■□□□ 1.73
TUBB4B-202ENST00000604929 ANKLE2Q86XL3 938 aa25.83■■□□□ 1.73
TUBB4B-202ENST00000604929 A0A1W2PP64 1363 aa25.82■■□□□ 1.72
TUBB4B-202ENST00000604929 SETD1BQ9UPS6 1966 aaKnown RBP25.81■■□□□ 1.72
TUBB4B-202ENST00000604929 MORC1Q86VD1 984 aa25.81■■□□□ 1.72
TUBB4B-202ENST00000604929 CGNL1Q0VF96 1302 aa25.81■■□□□ 1.72
TUBB4B-202ENST00000604929 TERF2IPQ9NYB0 399 aa25.81■■□□□ 1.72
TUBB4B-202ENST00000604929 NINLQ9Y2I6 1382 aa25.79■■□□□ 1.72
TUBB4B-202ENST00000604929 KNDC1Q76NI1 1749 aa25.78■■□□□ 1.72
TUBB4B-202ENST00000604929 ZBED9Q6R2W3 1325 aa25.77■■□□□ 1.72
TUBB4B-202ENST00000604929 NCKAP5LQ9HCH0 1330 aa25.77■■□□□ 1.72
TUBB4B-202ENST00000604929 CPS1P31327 1500 aa25.77■■□□□ 1.72
TUBB4B-202ENST00000604929 HDGFL2Q7Z4V5 671 aaPredicted RBP25.76■■□□□ 1.72
TUBB4B-202ENST00000604929 NUDT16Q96DE0 195 aaKnown RBP25.76■■□□□ 1.72
TUBB4B-202ENST00000604929 NUTM2FA1L443 756 aa25.75■■□□□ 1.71
TUBB4B-202ENST00000604929 CD163L1Q9NR16 1453 aa25.74■■□□□ 1.71
TUBB4B-202ENST00000604929 GGNBP2Q9H3C7 697 aa25.73■■□□□ 1.71
TUBB4B-202ENST00000604929 ADAMTS8Q9UP79 889 aa25.73■■□□□ 1.71
TUBB4B-202ENST00000604929 SALL2Q9Y467 1007 aaPredicted RBP25.72■■□□□ 1.71
TUBB4B-202ENST00000604929 KCNA6P17658 529 aa25.71■■□□□ 1.71
TUBB4B-202ENST00000604929 CCDC61Q9Y6R9 512 aa25.71■■□□□ 1.71
TUBB4B-202ENST00000604929 ZNF142P52746 1687 aaPredicted RBP25.7■■□□□ 1.71
TUBB4B-202ENST00000604929 FYB1O15117 783 aa25.7■■□□□ 1.7
TUBB4B-202ENST00000604929 WDR43Q15061 677 aaKnown RBP eCLIP25.7■■□□□ 1.78e-7■■■■■ 31.1
TUBB4B-202ENST00000604929 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.7■■□□□ 1.7
TUBB4B-202ENST00000604929 PPIP5K1Q6PFW1 1433 aa25.69■■□□□ 1.7
TUBB4B-202ENST00000604929 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.69■■□□□ 1.7
TUBB4B-202ENST00000604929 PRR36Q9H6K5 1346 aa25.68■■□□□ 1.7
TUBB4B-202ENST00000604929 DIP2AQ14689 1571 aa25.67■■□□□ 1.7
TUBB4B-202ENST00000604929 USP32Q8NFA0 1604 aa25.65■■□□□ 1.7
TUBB4B-202ENST00000604929 MTHFSP49914 203 aa25.64■■□□□ 1.7
TUBB4B-202ENST00000604929 NSD2O96028 1365 aa25.64■■□□□ 1.7
TUBB4B-202ENST00000604929 RBM33Q96EV2 1170 aaKnown RBP25.64■■□□□ 1.69
TUBB4B-202ENST00000604929 PTCH1Q13635 1447 aa25.62■■□□□ 1.69
TUBB4B-202ENST00000604929 PIK3R4Q99570 1358 aa25.61■■□□□ 1.69
TUBB4B-202ENST00000604929 ATP7BP35670 1465 aa25.61■■□□□ 1.69
TUBB4B-202ENST00000604929 CPSF1Q10570 1443 aaKnown RBP25.59■■□□□ 1.69
TUBB4B-202ENST00000604929 SUPT16HQ9Y5B9 1047 aaKnown RBP25.59■■□□□ 1.69
TUBB4B-202ENST00000604929 NPHP4O75161 1426 aaPredicted RBP25.59■■□□□ 1.69
TUBB4B-202ENST00000604929 POLR3AO14802 1390 aaPredicted RBP25.57■■□□□ 1.68
TUBB4B-202ENST00000604929 CCDC146Q8IYE0 955 aa25.57■■□□□ 1.68
TUBB4B-202ENST00000604929 XRN1Q8IZH2 1706 aaKnown RBP25.56■■□□□ 1.68
TUBB4B-202ENST00000604929 ADGRB2O60241 1585 aa25.56■■□□□ 1.68
TUBB4B-202ENST00000604929 BLMP54132 1417 aaPredicted RBP25.56■■□□□ 1.68
TUBB4B-202ENST00000604929 FBLN1P23142 703 aa25.56■■□□□ 1.68
TUBB4B-202ENST00000604929 PMFBP1Q8TBY8 1022 aa25.56■■□□□ 1.68
TUBB4B-202ENST00000604929 ACEP12821 1306 aa25.56■■□□□ 1.68
TUBB4B-202ENST00000604929 NME9Q86XW9 330 aa25.55■■□□□ 1.68
TUBB4B-202ENST00000604929 ZNF692Q9BU19 519 aaPredicted RBP25.55■■□□□ 1.68
TUBB4B-202ENST00000604929 ZRANB1Q9UGI0 708 aa25.55■■□□□ 1.68
TUBB4B-202ENST00000604929 KDM4FA0A1W2PPD8 638 aa25.54■■□□□ 1.68
TUBB4B-202ENST00000604929 CFAP53Q96M91 514 aa25.53■■□□□ 1.68
TUBB4B-202ENST00000604929 INSRP06213 1382 aa25.53■■□□□ 1.68
TUBB4B-202ENST00000604929 PLEKHG3A1L390 1219 aa25.53■■□□□ 1.68
TUBB4B-202ENST00000604929 EDC4Q6P2E9 1401 aaKnown RBP25.52■■□□□ 1.68
TUBB4B-202ENST00000604929 HSPA2P54652 639 aa25.52■■□□□ 1.68
TUBB4B-202ENST00000604929 FKBP8Q14318 412 aa25.52■■□□□ 1.68
TUBB4B-202ENST00000604929 CHD2O14647 1828 aaKnown RBP25.52■■□□□ 1.68
TUBB4B-202ENST00000604929 CDC42BPGQ6DT37 1551 aa25.51■■□□□ 1.67
TUBB4B-202ENST00000604929 NUDCQ9Y266 331 aa25.49■■□□□ 1.67
TUBB4B-202ENST00000604929 PPM1GO15355 546 aaPredicted RBP25.47■■□□□ 1.67
TUBB4B-202ENST00000604929 NEFLP07196 543 aa25.47■■□□□ 1.67
TUBB4B-202ENST00000604929 NGDNQ8NEJ9 315 aaKnown RBP25.47■■□□□ 1.67
TUBB4B-202ENST00000604929 CDCA7LQ96GN5 454 aa25.47■■□□□ 1.67
TUBB4B-202ENST00000604929 KIF20BQ96Q89 1820 aa25.46■■□□□ 1.67
TUBB4B-202ENST00000604929 APAF1O14727 1248 aa25.46■■□□□ 1.67
TUBB4B-202ENST00000604929 SMG6Q86US8 1419 aaKnown RBP25.46■■□□□ 1.67
TUBB4B-202ENST00000604929 C14orf37Q86TY3 774 aa25.46■■□□□ 1.67
TUBB4B-202ENST00000604929 NKTRP30414 1462 aaKnown RBP25.45■■□□□ 1.67
TUBB4B-202ENST00000604929 COG3Q96JB2 828 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms