RNA–Protein interactions for RNA: ENST00000604689.1

TUBE1-207, Transcript of tubulin epsilon 1, humanhuman

Gene TUBE1, Length 3,610 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-207ENST00000604689 NLRP7Q8WX94 980 aa9.04□□□□□ -0.96
TUBE1-207ENST00000604689 KLHL42Q9P2K6 505 aa9.04□□□□□ -0.96
TUBE1-207ENST00000604689 APBB1IPQ7Z5R6 666 aaPredicted RBP9.04□□□□□ -0.96
TUBE1-207ENST00000604689 FAM212AQ96EL1 285 aa9.03□□□□□ -0.96
TUBE1-207ENST00000604689 SPTY2D1Q68D10 685 aaPredicted RBP9.03□□□□□ -0.96
TUBE1-207ENST00000604689 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.03□□□□□ -0.96
TUBE1-207ENST00000604689 DHX16O60231 1041 aaKnown RBP9.03□□□□□ -0.96
TUBE1-207ENST00000604689 PPP4R3BQ5MIZ7 849 aa9.03□□□□□ -0.96
TUBE1-207ENST00000604689 CASC1Q6TDU7 716 aa9.03□□□□□ -0.96
TUBE1-207ENST00000604689 FAM43AQ8N2R8 423 aa9.03□□□□□ -0.96
TUBE1-207ENST00000604689 CLIP1P30622 1438 aa9.02□□□□□ -0.97
TUBE1-207ENST00000604689 CUX1P39880 1505 aa9.02□□□□□ -0.97
TUBE1-207ENST00000604689 IRF6O14896 467 aa9.02□□□□□ -0.97
TUBE1-207ENST00000604689 PPP4R2Q9NY27 417 aa9.02□□□□□ -0.97
TUBE1-207ENST00000604689 FOXD4Q12950 439 aaPredicted RBP9.01□□□□□ -0.97
TUBE1-207ENST00000604689 ZNF467Q7Z7K2 595 aaPredicted RBP9.01□□□□□ -0.97
TUBE1-207ENST00000604689 DPYSL4O14531 572 aa9.01□□□□□ -0.97
TUBE1-207ENST00000604689 RINLQ6ZS11 566 aa9.01□□□□□ -0.97
TUBE1-207ENST00000604689 ADCY10Q96PN6 1610 aa9.01□□□□□ -0.97
TUBE1-207ENST00000604689 TNNT1P13805 278 aa9.01□□□□□ -0.97
TUBE1-207ENST00000604689 NOM1Q5C9Z4 860 aaKnown RBP9.01□□□□□ -0.97
TUBE1-207ENST00000604689 PBXIP1Q96AQ6 731 aa9.01□□□□□ -0.97
TUBE1-207ENST00000604689 BCL2L13Q9BXK5 485 aa9.01□□□□□ -0.97
TUBE1-207ENST00000604689 RBM47A0AV96 593 aaKnown RBP9□□□□□ -0.97
TUBE1-207ENST00000604689 CCER2I3L3R5 266 aa9□□□□□ -0.97
TUBE1-207ENST00000604689 SCNN1AP37088 669 aa9□□□□□ -0.97
TUBE1-207ENST00000604689 KDM5BQ9UGL1 1544 aa9□□□□□ -0.97
TUBE1-207ENST00000604689 RALBP1Q15311 655 aa9□□□□□ -0.97
TUBE1-207ENST00000604689 STK26Q9P289 416 aa9□□□□□ -0.97
TUBE1-207ENST00000604689 ZNF500O60304 480 aaPredicted RBP9□□□□□ -0.97
TUBE1-207ENST00000604689 KIF4AO95239 1232 aa8.99□□□□□ -0.97
TUBE1-207ENST00000604689 PDCL3Q9H2J4 239 aa8.99□□□□□ -0.97
TUBE1-207ENST00000604689 MYH16Q9H6N6 1097 aa8.99□□□□□ -0.97
TUBE1-207ENST00000604689 KIF21BO75037 1637 aa8.99□□□□□ -0.97
TUBE1-207ENST00000604689 PPRC1Q5VV67 1664 aaKnown RBP8.99□□□□□ -0.97
TUBE1-207ENST00000604689 CT47B1P0C2W7 299 aaPredicted RBP8.99□□□□□ -0.97
TUBE1-207ENST00000604689 ANP32AP39687 249 aaKnown RBP8.99□□□□□ -0.97
TUBE1-207ENST00000604689 SSR1P43307 286 aaKnown RBP8.99□□□□□ -0.97
TUBE1-207ENST00000604689 TBC1D2BQ9UPU7 963 aa8.99□□□□□ -0.97
TUBE1-207ENST00000604689 GRXCR2A6NFK2 248 aa8.99□□□□□ -0.97
TUBE1-207ENST00000604689 LMOD3Q0VAK6 560 aa8.99□□□□□ -0.97
TUBE1-207ENST00000604689 EGFL6Q8IUX8 553 aa8.99□□□□□ -0.97
TUBE1-207ENST00000604689 GPATCH3Q96I76 525 aa8.99□□□□□ -0.97
TUBE1-207ENST00000604689 ADAMTS19Q8TE59 1207 aa8.98□□□□□ -0.97
TUBE1-207ENST00000604689 IPO9Q96P70 1041 aaKnown RBP8.98□□□□□ -0.97
TUBE1-207ENST00000604689 NAALADL2Q58DX5 795 aa8.98□□□□□ -0.97
TUBE1-207ENST00000604689 HSP90AB3PQ58FF7 597 aa8.98□□□□□ -0.97
TUBE1-207ENST00000604689 GORABQ5T7V8 394 aa8.98□□□□□ -0.97
TUBE1-207ENST00000604689 TOPBP1Q92547 1522 aa8.98□□□□□ -0.97
TUBE1-207ENST00000604689 SYNJ1O43426 1573 aa8.98□□□□□ -0.97
TUBE1-207ENST00000604689 TTC36A6NLP5 189 aa8.98□□□□□ -0.97
TUBE1-207ENST00000604689 AMHR2Q16671 573 aa8.98□□□□□ -0.97
TUBE1-207ENST00000604689 TRIM44Q96DX7 344 aaPredicted RBP8.98□□□□□ -0.97
TUBE1-207ENST00000604689 CAPN15O75808 1086 aa8.97□□□□□ -0.97
TUBE1-207ENST00000604689 ATL2Q8NHH9 583 aa8.97□□□□□ -0.97
TUBE1-207ENST00000604689 PRR29P0C7W0 189 aa8.97□□□□□ -0.97
TUBE1-207ENST00000604689 TAF3Q5VWG9 929 aa8.97□□□□□ -0.97
TUBE1-207ENST00000604689 SKAP1Q86WV1 359 aa8.97□□□□□ -0.97
TUBE1-207ENST00000604689 IFT140Q96RY7 1462 aa8.97□□□□□ -0.97
TUBE1-207ENST00000604689 MAP4K4O95819 1239 aaPredicted RBP8.97□□□□□ -0.97
TUBE1-207ENST00000604689 DDX27Q96GQ7 796 aaKnown RBP8.97□□□□□ -0.97
TUBE1-207ENST00000604689 GET4Q7L5D6 327 aaPredicted RBP8.96□□□□□ -0.97
TUBE1-207ENST00000604689 VRTNQ9H8Y1 702 aa8.96□□□□□ -0.97
TUBE1-207ENST00000604689 PCDHB8Q9UN66 801 aa8.96□□□□□ -0.97
TUBE1-207ENST00000604689 PCDHB13Q9Y5F0 798 aa8.96□□□□□ -0.97
TUBE1-207ENST00000604689 TPD52L2O43399 206 aaKnown RBP8.96□□□□□ -0.98
TUBE1-207ENST00000604689 SLC4A3P48751 1232 aa8.96□□□□□ -0.98
TUBE1-207ENST00000604689 MAP2K5Q13163 448 aa8.96□□□□□ -0.98
TUBE1-207ENST00000604689 DPH6Q7L8W6 267 aa8.96□□□□□ -0.98
TUBE1-207ENST00000604689 SUGT1Q9Y2Z0 365 aa8.96□□□□□ -0.98
TUBE1-207ENST00000604689 GOLGA3Q08378 1498 aa8.96□□□□□ -0.98
TUBE1-207ENST00000604689 CCDC181Q5TID7 509 aa8.95□□□□□ -0.98
TUBE1-207ENST00000604689 GOPCQ9HD26 462 aa8.95□□□□□ -0.98
TUBE1-207ENST00000604689 MRVI1Q9Y6F6 885 aa8.95□□□□□ -0.98
TUBE1-207ENST00000604689 GLI2P10070 1586 aa8.95□□□□□ -0.98
TUBE1-207ENST00000604689 TNNT3P45378 269 aaPredicted RBP8.95□□□□□ -0.98
TUBE1-207ENST00000604689 PNMA2Q9UL42 364 aa8.95□□□□□ -0.98
TUBE1-207ENST00000604689 NBPF1Q3BBV0 1214 aa8.95□□□□□ -0.98
TUBE1-207ENST00000604689 KIF13AQ9H1H9 1805 aa8.94□□□□□ -0.98
TUBE1-207ENST00000604689 MPHOSPH10O00566 681 aaKnown RBP8.94□□□□□ -0.98
TUBE1-207ENST00000604689 OXER1Q8TDS5 423 aa8.94□□□□□ -0.98
TUBE1-207ENST00000604689 PHF8Q9UPP1 1060 aa8.94□□□□□ -0.98
TUBE1-207ENST00000604689 ERICH4A6NGS2 130 aa8.94□□□□□ -0.98
TUBE1-207ENST00000604689 TCERG1O14776 1098 aaKnown RBP8.94□□□□□ -0.98
TUBE1-207ENST00000604689 MFSD4BQ5TF39 518 aa8.94□□□□□ -0.98
TUBE1-207ENST00000604689 HDGFL1Q5TGJ6 251 aa8.94□□□□□ -0.98
TUBE1-207ENST00000604689 VPS8Q8N3P4 1428 aa8.94□□□□□ -0.98
TUBE1-207ENST00000604689 MINK1Q8N4C8 1332 aaPredicted RBP8.94□□□□□ -0.98
TUBE1-207ENST00000604689 LRRIQ1Q96JM4 1722 aa8.94□□□□□ -0.98
TUBE1-207ENST00000604689 CGNQ9P2M7 1197 aaKnown RBP8.94□□□□□ -0.98
TUBE1-207ENST00000604689 RAB3GAP2Q9H2M9 1393 aa8.94□□□□□ -0.98
TUBE1-207ENST00000604689 TSNAXIP1Q2TAA8 658 aa8.93□□□□□ -0.98
TUBE1-207ENST00000604689 CFAP70Q5T0N1 1121 aa8.93□□□□□ -0.98
TUBE1-207ENST00000604689 MTMR14Q8NCE2 650 aa8.93□□□□□ -0.98
TUBE1-207ENST00000604689 EVI5LQ96CN4 794 aa8.93□□□□□ -0.98
TUBE1-207ENST00000604689 CDCA7Q9BWT1 371 aaPredicted RBP8.93□□□□□ -0.98
TUBE1-207ENST00000604689 TERF2IPQ9NYB0 399 aa8.93□□□□□ -0.98
TUBE1-207ENST00000604689 MAGI1Q96QZ7 1491 aaPredicted RBP8.93□□□□□ -0.98
TUBE1-207ENST00000604689 NBPF11Q86T75 865 aa8.92□□□□□ -0.98
TUBE1-207ENST00000604689 CARD10Q9BWT7 1032 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms