RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.79■□□□□ 0.76
RNF40-212ENST00000602784 POGKQ9P215 609 aa19.79■□□□□ 0.76
RNF40-212ENST00000602784 PLEKHH1Q9ULM0 1364 aa19.79■□□□□ 0.76
RNF40-212ENST00000602784 NALCNQ8IZF0 1738 aa19.77■□□□□ 0.76
RNF40-212ENST00000602784 SLAIN2Q9P270 581 aa19.77■□□□□ 0.76
RNF40-212ENST00000602784 ARHGEF28Q8N1W1 1705 aaKnown RBP19.75■□□□□ 0.75
RNF40-212ENST00000602784 CARD11Q9BXL7 1154 aa19.73■□□□□ 0.75
RNF40-212ENST00000602784 CDC42BPGQ6DT37 1551 aa19.73■□□□□ 0.75
RNF40-212ENST00000602784 PIP4K2BP78356 416 aa19.71■□□□□ 0.75
RNF40-212ENST00000602784 SAFB2Q14151 953 aaKnown RBP eCLIP19.71■□□□□ 0.75
RNF40-212ENST00000602784 EIF3AQ14152 1382 aaKnown RBP19.7■□□□□ 0.74
RNF40-212ENST00000602784 MST1RQ04912 1400 aa19.7■□□□□ 0.74
RNF40-212ENST00000602784 CENPJQ9HC77 1338 aaPredicted RBP19.7■□□□□ 0.74
RNF40-212ENST00000602784 ADGRB2O60241 1585 aa19.7■□□□□ 0.74
RNF40-212ENST00000602784 ILDR1Q86SU0 546 aaPredicted RBP19.69■□□□□ 0.74
RNF40-212ENST00000602784 SCAF1Q9H7N4 1312 aaKnown RBP19.68■□□□□ 0.74
RNF40-212ENST00000602784 MINK1Q8N4C8 1332 aaPredicted RBP19.67■□□□□ 0.74
RNF40-212ENST00000602784 C1orf167Q5SNV9 1468 aa19.67■□□□□ 0.74
RNF40-212ENST00000602784 WASLO00401 505 aaPredicted RBP19.65■□□□□ 0.74
RNF40-212ENST00000602784 HIRIP3Q9BW71 556 aaPredicted RBP19.64■□□□□ 0.73
RNF40-212ENST00000602784 ROBO1Q9Y6N7 1651 aa19.64■□□□□ 0.73
RNF40-212ENST00000602784 FMN2Q9NZ56 1722 aa19.64■□□□□ 0.73
RNF40-212ENST00000602784 SBNO2Q9Y2G9 1366 aa19.63■□□□□ 0.73
RNF40-212ENST00000602784 BRINP3Q76B58 766 aa19.63■□□□□ 0.73
RNF40-212ENST00000602784 ANKARQ7Z5J8 1434 aa19.62■□□□□ 0.73
RNF40-212ENST00000602784 QRICH2Q9H0J4 1663 aa19.62■□□□□ 0.73
RNF40-212ENST00000602784 SLC24A1O60721 1099 aa19.6■□□□□ 0.73
RNF40-212ENST00000602784 CDK19Q9BWU1 502 aa19.6■□□□□ 0.73
RNF40-212ENST00000602784 ORAI2Q96SN7 254 aa19.59■□□□□ 0.73
RNF40-212ENST00000602784 TULP4Q9NRJ4 1543 aa19.59■□□□□ 0.73
RNF40-212ENST00000602784 USP47Q96K76 1375 aa19.58■□□□□ 0.73
RNF40-212ENST00000602784 EVC2Q86UK5 1308 aa19.58■□□□□ 0.73
RNF40-212ENST00000602784 HSPA1LP34931 641 aa19.58■□□□□ 0.72
RNF40-212ENST00000602784 ESCO1Q5FWF5 840 aa19.58■□□□□ 0.72
RNF40-212ENST00000602784 ST20-MTHFSA0A0A6YYL1 179 aa19.57■□□□□ 0.72
RNF40-212ENST00000602784 NUTM2FA1L443 756 aa19.57■□□□□ 0.72
RNF40-212ENST00000602784 AHDC1Q5TGY3 1603 aaPredicted RBP19.56■□□□□ 0.72
RNF40-212ENST00000602784 PRR36Q9H6K5 1346 aa19.55■□□□□ 0.72
RNF40-212ENST00000602784 USP32Q8NFA0 1604 aa19.55■□□□□ 0.72
RNF40-212ENST00000602784 NUDT16Q96DE0 195 aaKnown RBP19.55■□□□□ 0.72
RNF40-212ENST00000602784 TESK2Q96S53 571 aa19.55■□□□□ 0.72
RNF40-212ENST00000602784 SRPK2P78362 688 aaKnown RBP19.53■□□□□ 0.72
RNF40-212ENST00000602784 PHF8Q9UPP1 1060 aa19.53■□□□□ 0.72
RNF40-212ENST00000602784 CCDC61Q9Y6R9 512 aa19.53■□□□□ 0.72
RNF40-212ENST00000602784 NHSL1Q5SYE7 1610 aa19.53■□□□□ 0.72
RNF40-212ENST00000602784 ATP7BP35670 1465 aa19.53■□□□□ 0.72
RNF40-212ENST00000602784 KIF1AQ12756 1690 aa19.52■□□□□ 0.72
RNF40-212ENST00000602784 NPHP3Q7Z494 1330 aa19.52■□□□□ 0.72
RNF40-212ENST00000602784 RGPD8O14715 1765 aaPredicted RBP19.52■□□□□ 0.72
RNF40-212ENST00000602784 PUS7Q96PZ0 661 aaKnown RBP19.52■□□□□ 0.72
RNF40-212ENST00000602784 EIF4G2P78344 907 aaKnown RBP eCLIP19.51■□□□□ 0.71
RNF40-212ENST00000602784 PHLPP1O60346 1717 aa19.51■□□□□ 0.71
RNF40-212ENST00000602784 FOXO3O43524 673 aa19.5■□□□□ 0.71
RNF40-212ENST00000602784 CABP2Q9NPB3 220 aa19.5■□□□□ 0.71
RNF40-212ENST00000602784 SOS2Q07890 1332 aaPredicted RBP19.5■□□□□ 0.71
RNF40-212ENST00000602784 ITSN1Q15811 1721 aa19.49■□□□□ 0.71
RNF40-212ENST00000602784 PLEKHG3A1L390 1219 aa19.49■□□□□ 0.71
RNF40-212ENST00000602784 COL16A1Q07092 1604 aaPredicted RBP19.49■□□□□ 0.71
RNF40-212ENST00000602784 ATAD2Q6PL18 1390 aa19.47■□□□□ 0.71
RNF40-212ENST00000602784 TOPAZ1Q8N9V7 1692 aa19.47■□□□□ 0.71
RNF40-212ENST00000602784 DDX17Q92841 729 aaKnown RBP19.47■□□□□ 0.71
RNF40-212ENST00000602784 LRRC59Q96AG4 307 aaKnown RBP19.47■□□□□ 0.71
RNF40-212ENST00000602784 TMF1P82094 1093 aa19.46■□□□□ 0.71
RNF40-212ENST00000602784 PMFBP1Q8TBY8 1022 aa19.46■□□□□ 0.71
RNF40-212ENST00000602784 PXDNQ92626 1479 aa19.46■□□□□ 0.71
RNF40-212ENST00000602784 HSPA5P11021 654 aaKnown RBP19.45■□□□□ 0.7
RNF40-212ENST00000602784 POLR3AO14802 1390 aaPredicted RBP19.44■□□□□ 0.7
RNF40-212ENST00000602784 PPIP5K1Q6PFW1 1433 aa19.44■□□□□ 0.7
RNF40-212ENST00000602784 PSME1Q06323 249 aa19.44■□□□□ 0.7
RNF40-212ENST00000602784 CDCA8Q53HL2 280 aa19.44■□□□□ 0.7
RNF40-212ENST00000602784 KRT28Q7Z3Y7 464 aa19.44■□□□□ 0.7
RNF40-212ENST00000602784 NGDNQ8NEJ9 315 aaKnown RBP19.44■□□□□ 0.7
RNF40-212ENST00000602784 JCADQ9P266 1359 aa19.44■□□□□ 0.7
RNF40-212ENST00000602784 ZEB1P37275 1124 aaPredicted RBP19.43■□□□□ 0.7
RNF40-212ENST00000602784 CABP1Q9NZU7 370 aa19.43■□□□□ 0.7
RNF40-212ENST00000602784 ACEP12821 1306 aa19.42■□□□□ 0.7
RNF40-212ENST00000602784 SBNO1A3KN83 1393 aa19.41■□□□□ 0.7
RNF40-212ENST00000602784 DISP3Q9P2K9 1392 aa19.41■□□□□ 0.7
RNF40-212ENST00000602784 XPCQ01831 940 aaPredicted RBP19.4■□□□□ 0.7
RNF40-212ENST00000602784 NINLQ9Y2I6 1382 aa19.39■□□□□ 0.69
RNF40-212ENST00000602784 BRD4O60885 1362 aaPredicted RBP19.38■□□□□ 0.69
RNF40-212ENST00000602784 SHPRHQ149N8 1683 aa19.38■□□□□ 0.69
RNF40-212ENST00000602784 SPATA31A3Q5VYP0 1347 aa19.38■□□□□ 0.69
RNF40-212ENST00000602784 ZNF692Q9BU19 519 aaPredicted RBP19.38■□□□□ 0.69
RNF40-212ENST00000602784 SPATA31A6Q5VVP1 1343 aa19.37■□□□□ 0.69
RNF40-212ENST00000602784 PNPLA6Q8IY17 1366 aa19.36■□□□□ 0.69
RNF40-212ENST00000602784 CPSF1Q10570 1443 aaKnown RBP19.35■□□□□ 0.69
RNF40-212ENST00000602784 TNS3Q68CZ2 1445 aa19.35■□□□□ 0.69
RNF40-212ENST00000602784 SLC12A5Q9H2X9 1139 aa19.35■□□□□ 0.69
RNF40-212ENST00000602784 TRPM3Q9HCF6 1732 aaPredicted RBP19.34■□□□□ 0.69
RNF40-212ENST00000602784 ARHGEF10O15013 1369 aa19.34■□□□□ 0.69
RNF40-212ENST00000602784 TMC1Q8TDI8 760 aa19.34■□□□□ 0.69
RNF40-212ENST00000602784 TERF2IPQ9NYB0 399 aa19.34■□□□□ 0.69
RNF40-212ENST00000602784 USP6P35125 1406 aa19.33■□□□□ 0.68
RNF40-212ENST00000602784 COL22A1Q8NFW1 1626 aaPredicted RBP19.33■□□□□ 0.68
RNF40-212ENST00000602784 CD163L1Q9NR16 1453 aa19.31■□□□□ 0.68
RNF40-212ENST00000602784 PAK3O75914 559 aaPredicted RBP19.31■□□□□ 0.68
RNF40-212ENST00000602784 HDGFL2Q7Z4V5 671 aaPredicted RBP19.31■□□□□ 0.68
RNF40-212ENST00000602784 SSH2Q76I76 1423 aa19.31■□□□□ 0.68
RNF40-212ENST00000602784 AKAP12Q02952 1782 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms