RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 SAFB2Q14151 953 aaKnown RBP eCLIP25.79■■□□□ 1.72
SSBP4-212ENST00000601919 WAPLQ7Z5K2 1190 aa25.78■■□□□ 1.72
SSBP4-212ENST00000601919 POLR3GLQ9BT43 218 aa25.77■■□□□ 1.72
SSBP4-212ENST00000601919 PUS7Q96PZ0 661 aaKnown RBP25.76■■□□□ 1.71
SSBP4-212ENST00000601919 PLEKHH1Q9ULM0 1364 aa25.76■■□□□ 1.71
SSBP4-212ENST00000601919 MINK1Q8N4C8 1332 aaPredicted RBP25.75■■□□□ 1.71
SSBP4-212ENST00000601919 AEBP2Q6ZN18 517 aaPredicted RBP25.75■■□□□ 1.71
SSBP4-212ENST00000601919 NKTRP30414 1462 aaKnown RBP25.73■■□□□ 1.71
SSBP4-212ENST00000601919 DDX10Q13206 875 aaKnown RBP25.73■■□□□ 1.71
SSBP4-212ENST00000601919 DIEXFQ68CQ4 756 aaKnown RBP25.71■■□□□ 1.71
SSBP4-212ENST00000601919 TULP4Q9NRJ4 1543 aa25.71■■□□□ 1.71
SSBP4-212ENST00000601919 ADGRB2O60241 1585 aa25.7■■□□□ 1.71
SSBP4-212ENST00000601919 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.68■■□□□ 1.7
SSBP4-212ENST00000601919 SRPK2P78362 688 aaKnown RBP25.67■■□□□ 1.7
SSBP4-212ENST00000601919 WASLO00401 505 aaPredicted RBP25.66■■□□□ 1.7
SSBP4-212ENST00000601919 CDK19Q9BWU1 502 aa25.66■■□□□ 1.7
SSBP4-212ENST00000601919 ATAD2Q6PL18 1390 aa25.66■■□□□ 1.7
SSBP4-212ENST00000601919 PROSER2Q86WR7 435 aaPredicted RBP25.64■■□□□ 1.7
SSBP4-212ENST00000601919 STRCP1A6NGW2 1772 aa25.63■■□□□ 1.69
SSBP4-212ENST00000601919 NINLQ9Y2I6 1382 aa25.62■■□□□ 1.69
SSBP4-212ENST00000601919 CABP2Q9NPB3 220 aa25.62■■□□□ 1.69
SSBP4-212ENST00000601919 NCOA3Q9Y6Q9 1424 aa25.61■■□□□ 1.69
SSBP4-212ENST00000601919 MYOM1P52179 1685 aa25.61■■□□□ 1.69
SSBP4-212ENST00000601919 ADGRL3Q9HAR2 1447 aa25.6■■□□□ 1.69
SSBP4-212ENST00000601919 NALCNQ8IZF0 1738 aa25.6■■□□□ 1.69
SSBP4-212ENST00000601919 C14orf37Q86TY3 774 aa25.59■■□□□ 1.69
SSBP4-212ENST00000601919 CDC42BPGQ6DT37 1551 aa25.57■■□□□ 1.68
SSBP4-212ENST00000601919 TMC1Q8TDI8 760 aa25.56■■□□□ 1.68
SSBP4-212ENST00000601919 ZNF335Q9H4Z2 1342 aaPredicted RBP25.54■■□□□ 1.68
SSBP4-212ENST00000601919 NUDT16Q96DE0 195 aaKnown RBP25.53■■□□□ 1.68
SSBP4-212ENST00000601919 PANK3Q9H999 370 aa25.53■■□□□ 1.68
SSBP4-212ENST00000601919 ITSN1Q15811 1721 aa25.53■■□□□ 1.68
SSBP4-212ENST00000601919 FMN2Q9NZ56 1722 aa25.53■■□□□ 1.68
SSBP4-212ENST00000601919 TMEM94Q12767 1356 aa25.53■■□□□ 1.68
SSBP4-212ENST00000601919 CCDC61Q9Y6R9 512 aa25.52■■□□□ 1.68
SSBP4-212ENST00000601919 ANKARQ7Z5J8 1434 aa25.52■■□□□ 1.68
SSBP4-212ENST00000601919 C19orf44Q9H6X5 657 aa25.51■■□□□ 1.67
SSBP4-212ENST00000601919 ATP7BP35670 1465 aa25.5■■□□□ 1.67
SSBP4-212ENST00000601919 RBM33Q96EV2 1170 aaKnown RBP25.5■■□□□ 1.67
SSBP4-212ENST00000601919 SLC12A5Q9H2X9 1139 aa25.5■■□□□ 1.67
SSBP4-212ENST00000601919 TERF2IPQ9NYB0 399 aa25.5■■□□□ 1.67
SSBP4-212ENST00000601919 LRRC7Q96NW7 1537 aa25.48■■□□□ 1.67
SSBP4-212ENST00000601919 DCCP43146 1447 aa25.48■■□□□ 1.67
SSBP4-212ENST00000601919 PPIP5K1Q6PFW1 1433 aa25.48■■□□□ 1.67
SSBP4-212ENST00000601919 ANKRD36BQ8N2N9 1353 aa25.48■■□□□ 1.67
SSBP4-212ENST00000601919 TOPAZ1Q8N9V7 1692 aa25.48■■□□□ 1.67
SSBP4-212ENST00000601919 ANP32CO43423 234 aa25.47■■□□□ 1.67
SSBP4-212ENST00000601919 MSH6P52701 1360 aa25.46■■□□□ 1.67
SSBP4-212ENST00000601919 HDGFL2Q7Z4V5 671 aaPredicted RBP25.46■■□□□ 1.67
SSBP4-212ENST00000601919 CABP1Q9NZU7 370 aa25.46■■□□□ 1.67
SSBP4-212ENST00000601919 KNSTRNQ9Y448 316 aa25.46■■□□□ 1.67
SSBP4-212ENST00000601919 XIRP1Q702N8 1843 aaKnown RBP25.46■■□□□ 1.67
SSBP4-212ENST00000601919 USP32Q8NFA0 1604 aa25.45■■□□□ 1.67
SSBP4-212ENST00000601919 PRR36Q9H6K5 1346 aa25.45■■□□□ 1.66
SSBP4-212ENST00000601919 ATF3P18847 181 aa25.45■■□□□ 1.66
SSBP4-212ENST00000601919 PER1O15534 1290 aaPredicted RBP25.43■■□□□ 1.66
SSBP4-212ENST00000601919 RGPD8O14715 1765 aaPredicted RBP25.43■■□□□ 1.66
SSBP4-212ENST00000601919 NUTM2FA1L443 756 aa25.42■■□□□ 1.66
SSBP4-212ENST00000601919 CADPS2Q86UW7 1296 aa25.42■■□□□ 1.66
SSBP4-212ENST00000601919 PLEKHG3A1L390 1219 aa25.41■■□□□ 1.66
SSBP4-212ENST00000601919 A0A1W2PP64 1363 aa25.4■■□□□ 1.66
SSBP4-212ENST00000601919 ZNF692Q9BU19 519 aaPredicted RBP25.39■■□□□ 1.66
SSBP4-212ENST00000601919 AKAP12Q02952 1782 aa25.39■■□□□ 1.65
SSBP4-212ENST00000601919 CD163L1Q9NR16 1453 aa25.38■■□□□ 1.65
SSBP4-212ENST00000601919 NSD3Q9BZ95 1437 aa25.37■■□□□ 1.65
SSBP4-212ENST00000601919 LTBP4Q8N2S1 1624 aa25.37■■□□□ 1.65
SSBP4-212ENST00000601919 CPSF1Q10570 1443 aaKnown RBP25.37■■□□□ 1.65
SSBP4-212ENST00000601919 KTN1Q86UP2 1357 aaKnown RBP25.36■■□□□ 1.65
SSBP4-212ENST00000601919 NPC1L1Q9UHC9 1359 aa25.36■■□□□ 1.65
SSBP4-212ENST00000601919 CARD14Q9BXL6 1004 aa25.36■■□□□ 1.65
SSBP4-212ENST00000601919 CGNL1Q0VF96 1302 aa25.35■■□□□ 1.65
SSBP4-212ENST00000601919 MON2Q7Z3U7 1717 aa25.34■■□□□ 1.65
SSBP4-212ENST00000601919 MIER1Q8N108 512 aa25.33■■□□□ 1.65
SSBP4-212ENST00000601919 NGDNQ8NEJ9 315 aaKnown RBP25.33■■□□□ 1.65
SSBP4-212ENST00000601919 PHF8Q9UPP1 1060 aa25.33■■□□□ 1.65
SSBP4-212ENST00000601919 C1orf167Q5SNV9 1468 aa25.33■■□□□ 1.65
SSBP4-212ENST00000601919 ACEP12821 1306 aa25.33■■□□□ 1.64
SSBP4-212ENST00000601919 KIF1AQ12756 1690 aa25.32■■□□□ 1.64
SSBP4-212ENST00000601919 POLR3AO14802 1390 aaPredicted RBP25.32■■□□□ 1.64
SSBP4-212ENST00000601919 MST1RQ04912 1400 aa25.32■■□□□ 1.64
SSBP4-212ENST00000601919 EDC4Q6P2E9 1401 aaKnown RBP25.32■■□□□ 1.64
SSBP4-212ENST00000601919 RALBP1Q15311 655 aa25.32■■□□□ 1.64
SSBP4-212ENST00000601919 ESCO1Q5FWF5 840 aa25.32■■□□□ 1.64
SSBP4-212ENST00000601919 AMER1Q5JTC6 1135 aaPredicted RBP25.32■■□□□ 1.64
SSBP4-212ENST00000601919 PRKRIP1Q9H875 184 aaPredicted RBP25.31■■□□□ 1.64
SSBP4-212ENST00000601919 NSD2O96028 1365 aa25.31■■□□□ 1.64
SSBP4-212ENST00000601919 PMFBP1Q8TBY8 1022 aa25.3■■□□□ 1.64
SSBP4-212ENST00000601919 CC2D1BQ5T0F9 858 aaKnown RBP25.28■■□□□ 1.64
SSBP4-212ENST00000601919 KIF20BQ96Q89 1820 aa25.28■■□□□ 1.64
SSBP4-212ENST00000601919 BRD4O60885 1362 aaPredicted RBP25.27■■□□□ 1.64
SSBP4-212ENST00000601919 USP6P35125 1406 aa25.27■■□□□ 1.64
SSBP4-212ENST00000601919 CNGB1Q14028 1251 aaPredicted RBP25.25■■□□□ 1.63
SSBP4-212ENST00000601919 PARD3Q8TEW0 1356 aa25.25■■□□□ 1.63
SSBP4-212ENST00000601919 NRKQ7Z2Y5 1582 aa25.24■■□□□ 1.63
SSBP4-212ENST00000601919 ORAI2Q96SN7 254 aa25.23■■□□□ 1.63
SSBP4-212ENST00000601919 SLAIN2Q9P270 581 aa25.23■■□□□ 1.63
SSBP4-212ENST00000601919 ANKRD26Q9UPS8 1709 aa25.23■■□□□ 1.63
SSBP4-212ENST00000601919 TTC21AQ8NDW8 1320 aa25.22■■□□□ 1.63
SSBP4-212ENST00000601919 CCER2I3L3R5 266 aa25.22■■□□□ 1.63
SSBP4-212ENST00000601919 PSME1Q06323 249 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms