RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 IFT172Q9UG01 1749 aa16.83■□□□□ 0.28
CHMP2A-207ENST00000600804 MARF1Q9Y4F3 1742 aaKnown RBP16.83■□□□□ 0.28
CHMP2A-207ENST00000600804 RXRBP28702 533 aa16.81■□□□□ 0.28
CHMP2A-207ENST00000600804 NEUROD1Q13562 356 aa16.81■□□□□ 0.28
CHMP2A-207ENST00000600804 COL22A1Q8NFW1 1626 aaPredicted RBP16.8■□□□□ 0.28
CHMP2A-207ENST00000600804 MYOM2P54296 1465 aa16.8■□□□□ 0.28
CHMP2A-207ENST00000600804 TONSLQ96HA7 1378 aa16.79■□□□□ 0.28
CHMP2A-207ENST00000600804 C1orf167Q5SNV9 1468 aa16.79■□□□□ 0.28
CHMP2A-207ENST00000600804 L3MBTL2Q969R5 705 aa16.78■□□□□ 0.28
CHMP2A-207ENST00000600804 RGL3Q3MIN7 710 aa16.77■□□□□ 0.28
CHMP2A-207ENST00000600804 ZNF326Q5BKZ1 582 aaKnown RBP16.77■□□□□ 0.28
CHMP2A-207ENST00000600804 NRXN1Q9ULB1 1477 aa16.77■□□□□ 0.28
CHMP2A-207ENST00000600804 PTCH1Q13635 1447 aa16.77■□□□□ 0.27
CHMP2A-207ENST00000600804 VGFO15240 615 aaPredicted RBP16.76■□□□□ 0.27
CHMP2A-207ENST00000600804 PRAG1Q86YV5 1406 aa16.76■□□□□ 0.27
CHMP2A-207ENST00000600804 ROBO2Q9HCK4 1378 aa16.76■□□□□ 0.27
CHMP2A-207ENST00000600804 LRRC59Q96AG4 307 aaKnown RBP16.75■□□□□ 0.27
CHMP2A-207ENST00000600804 C8orf37Q96NL8 207 aa16.74■□□□□ 0.27
CHMP2A-207ENST00000600804 DCAF11Q8TEB1 546 aa16.72■□□□□ 0.27
CHMP2A-207ENST00000600804 ORAI2Q96SN7 254 aa16.72■□□□□ 0.27
CHMP2A-207ENST00000600804 SOS2Q07890 1332 aaPredicted RBP16.71■□□□□ 0.27
CHMP2A-207ENST00000600804 PIK3C2GO75747 1445 aa16.71■□□□□ 0.27
CHMP2A-207ENST00000600804 RBM6P78332 1123 aaKnown RBP16.71■□□□□ 0.27
CHMP2A-207ENST00000600804 QTRT2Q9H974 415 aaKnown RBP16.71■□□□□ 0.27
CHMP2A-207ENST00000600804 CDC42BPGQ6DT37 1551 aa16.71■□□□□ 0.27
CHMP2A-207ENST00000600804 RGPD8O14715 1765 aaPredicted RBP16.71■□□□□ 0.27
CHMP2A-207ENST00000600804 ZEB1P37275 1124 aaPredicted RBP16.7■□□□□ 0.26
CHMP2A-207ENST00000600804 BRWD3Q6RI45 1802 aa16.7■□□□□ 0.26
CHMP2A-207ENST00000600804 KNDC1Q76NI1 1749 aa16.7■□□□□ 0.26
CHMP2A-207ENST00000600804 KIAA1210Q9ULL0 1709 aa16.7■□□□□ 0.26
CHMP2A-207ENST00000600804 ADAMTS2O95450 1211 aa16.69■□□□□ 0.26
CHMP2A-207ENST00000600804 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.69■□□□□ 0.26
CHMP2A-207ENST00000600804 ADGRF5Q8IZF2 1346 aa16.69■□□□□ 0.26
CHMP2A-207ENST00000600804 PXDNQ92626 1479 aa16.68■□□□□ 0.26
CHMP2A-207ENST00000600804 FMN2Q9NZ56 1722 aa16.67■□□□□ 0.26
CHMP2A-207ENST00000600804 ATRNO75882 1429 aa16.67■□□□□ 0.26
CHMP2A-207ENST00000600804 NGLY1Q96IV0 654 aa16.65■□□□□ 0.26
CHMP2A-207ENST00000600804 C14orf93Q9H972 538 aaKnown RBP16.65■□□□□ 0.26
CHMP2A-207ENST00000600804 KDM2AQ9Y2K7 1162 aa16.65■□□□□ 0.26
CHMP2A-207ENST00000600804 ABCA3Q99758 1704 aa16.64■□□□□ 0.25
CHMP2A-207ENST00000600804 BCL9LQ86UU0 1499 aa16.63■□□□□ 0.25
CHMP2A-207ENST00000600804 FNBP4Q8N3X1 1017 aaPredicted RBP16.63■□□□□ 0.25
CHMP2A-207ENST00000600804 GLI3P10071 1580 aa16.63■□□□□ 0.25
CHMP2A-207ENST00000600804 TRPM1Q7Z4N2 1603 aa16.63■□□□□ 0.25
CHMP2A-207ENST00000600804 RALGAPBQ86X10 1494 aa16.62■□□□□ 0.25
CHMP2A-207ENST00000600804 NBPF8Q3BBV2 869 aa16.62■□□□□ 0.25
CHMP2A-207ENST00000600804 USP21Q9UK80 565 aa16.62■□□□□ 0.25
CHMP2A-207ENST00000600804 GPRASP1Q5JY77 1395 aa16.62■□□□□ 0.25
CHMP2A-207ENST00000600804 ATAD2Q6PL18 1390 aa16.61■□□□□ 0.25
CHMP2A-207ENST00000600804 KIF1AQ12756 1690 aa16.6■□□□□ 0.25
CHMP2A-207ENST00000600804 PLCH1Q4KWH8 1693 aa16.59■□□□□ 0.25
CHMP2A-207ENST00000600804 TECPR2O15040 1411 aa16.59■□□□□ 0.25
CHMP2A-207ENST00000600804 ADGRB1O14514 1584 aa16.59■□□□□ 0.25
CHMP2A-207ENST00000600804 USP32Q8NFA0 1604 aa16.59■□□□□ 0.25
CHMP2A-207ENST00000600804 CFAP70Q5T0N1 1121 aa16.58■□□□□ 0.24
CHMP2A-207ENST00000600804 TRPC5Q9UL62 973 aaPredicted RBP16.58■□□□□ 0.24
CHMP2A-207ENST00000600804 PLEKHH1Q9ULM0 1364 aa16.58■□□□□ 0.24
CHMP2A-207ENST00000600804 XPCQ01831 940 aaPredicted RBP16.57■□□□□ 0.24
CHMP2A-207ENST00000600804 SLIT2O94813 1529 aa16.55■□□□□ 0.24
CHMP2A-207ENST00000600804 ESCO1Q5FWF5 840 aa16.55■□□□□ 0.24
CHMP2A-207ENST00000600804 NWD2Q9ULI1 1742 aa16.55■□□□□ 0.24
CHMP2A-207ENST00000600804 ROCK2O75116 1388 aaKnown RBP16.54■□□□□ 0.24
CHMP2A-207ENST00000600804 NPHP3Q7Z494 1330 aa16.54■□□□□ 0.24
CHMP2A-207ENST00000600804 WAPLQ7Z5K2 1190 aa16.54■□□□□ 0.24
CHMP2A-207ENST00000600804 LRPPRCP42704 1394 aaKnown RBP16.53■□□□□ 0.24
CHMP2A-207ENST00000600804 ABCC11Q96J66 1382 aa16.53■□□□□ 0.24
CHMP2A-207ENST00000600804 NUTM2FA1L443 756 aa16.53■□□□□ 0.24
CHMP2A-207ENST00000600804 FOXO3O43524 673 aa16.53■□□□□ 0.24
CHMP2A-207ENST00000600804 NBPF1Q3BBV0 1214 aa16.53■□□□□ 0.24
CHMP2A-207ENST00000600804 NRAPQ86VF7 1730 aa16.53■□□□□ 0.24
CHMP2A-207ENST00000600804 YTHDC2Q9H6S0 1430 aaKnown RBP16.52■□□□□ 0.23
CHMP2A-207ENST00000600804 DLC1Q96QB1 1528 aa16.51■□□□□ 0.23
CHMP2A-207ENST00000600804 SIRT1Q96EB6 747 aa16.51■□□□□ 0.23
CHMP2A-207ENST00000600804 TRPM3Q9HCF6 1732 aaPredicted RBP16.5■□□□□ 0.23
CHMP2A-207ENST00000600804 TMEM132EQ6IEE7 984 aa16.5■□□□□ 0.23
CHMP2A-207ENST00000600804 STK26Q9P289 416 aa16.5■□□□□ 0.23
CHMP2A-207ENST00000600804 CRYBG1Q9Y4K1 1723 aa16.5■□□□□ 0.23
CHMP2A-207ENST00000600804 GJD4Q96KN9 370 aaPredicted RBP16.49■□□□□ 0.23
CHMP2A-207ENST00000600804 CARD11Q9BXL7 1154 aa16.49■□□□□ 0.23
CHMP2A-207ENST00000600804 SPATA31A3Q5VYP0 1347 aa16.48■□□□□ 0.23
CHMP2A-207ENST00000600804 ARHGEF28Q8N1W1 1705 aaKnown RBP16.47■□□□□ 0.23
CHMP2A-207ENST00000600804 ALS2Q96Q42 1657 aa16.46■□□□□ 0.23
CHMP2A-207ENST00000600804 EIF3AQ14152 1382 aaKnown RBP16.45■□□□□ 0.22
CHMP2A-207ENST00000600804 TNS3Q68CZ2 1445 aa16.45■□□□□ 0.22
CHMP2A-207ENST00000600804 UNC5CLQ8IV45 518 aa16.44■□□□□ 0.22
CHMP2A-207ENST00000600804 ADGRB2O60241 1585 aa16.43■□□□□ 0.22
CHMP2A-207ENST00000600804 USP47Q96K76 1375 aa16.43■□□□□ 0.22
CHMP2A-207ENST00000600804 ZRANB1Q9UGI0 708 aa16.43■□□□□ 0.22
CHMP2A-207ENST00000600804 LRP5O75197 1615 aa16.43■□□□□ 0.22
CHMP2A-207ENST00000600804 BLMP54132 1417 aaPredicted RBP16.43■□□□□ 0.22
CHMP2A-207ENST00000600804 SBNO2Q9Y2G9 1366 aa16.42■□□□□ 0.22
CHMP2A-207ENST00000600804 CABLES1Q8TDN4 633 aa16.42■□□□□ 0.22
CHMP2A-207ENST00000600804 SLC24A1O60721 1099 aa16.41■□□□□ 0.22
CHMP2A-207ENST00000600804 KRT28Q7Z3Y7 464 aa16.41■□□□□ 0.22
CHMP2A-207ENST00000600804 DEFB132Q7Z7B7 95 aa16.41■□□□□ 0.22
CHMP2A-207ENST00000600804 CCDC125Q86Z20 511 aa16.41■□□□□ 0.22
CHMP2A-207ENST00000600804 TRAK1Q9UPV9 953 aa16.41■□□□□ 0.22
CHMP2A-207ENST00000600804 TNS1Q9HBL0 1735 aaKnown RBP16.41■□□□□ 0.22
CHMP2A-207ENST00000600804 EIF4G2P78344 907 aaKnown RBP eCLIP16.4■□□□□ 0.22
CHMP2A-207ENST00000600804 CENPJQ9HC77 1338 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms