RNA–Protein interactions for RNA: ENST00000600139.1

C19orf54-210, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 3

Gene C19orf54, Length 369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-210ENST00000600139 RPGRIP1LQ68CZ1 1315 aa13.31□□□□□ -0.28
C19orf54-210ENST00000600139 PIK3C2GO75747 1445 aa13.3□□□□□ -0.28
C19orf54-210ENST00000600139 LRRC59Q96AG4 307 aaKnown RBP13.3□□□□□ -0.28
C19orf54-210ENST00000600139 FMN2Q9NZ56 1722 aa13.3□□□□□ -0.28
C19orf54-210ENST00000600139 NRXN1Q9ULB1 1477 aa13.29□□□□□ -0.28
C19orf54-210ENST00000600139 MARF1Q9Y4F3 1742 aaKnown RBP13.29□□□□□ -0.28
C19orf54-210ENST00000600139 VGFO15240 615 aaPredicted RBP13.28□□□□□ -0.28
C19orf54-210ENST00000600139 RXRBP28702 533 aa13.28□□□□□ -0.28
C19orf54-210ENST00000600139 SLC4A1APQ9BWU0 796 aaKnown RBP13.28□□□□□ -0.28
C19orf54-210ENST00000600139 ATRNO75882 1429 aa13.28□□□□□ -0.28
C19orf54-210ENST00000600139 C8orf37Q96NL8 207 aa13.27□□□□□ -0.29
C19orf54-210ENST00000600139 LRPPRCP42704 1394 aaKnown RBP13.27□□□□□ -0.29
C19orf54-210ENST00000600139 BCL9LQ86UU0 1499 aa13.27□□□□□ -0.29
C19orf54-210ENST00000600139 ABCC11Q96J66 1382 aa13.25□□□□□ -0.29
C19orf54-210ENST00000600139 FNBP4Q8N3X1 1017 aaPredicted RBP13.25□□□□□ -0.29
C19orf54-210ENST00000600139 RGPD8O14715 1765 aaPredicted RBP13.25□□□□□ -0.29
C19orf54-210ENST00000600139 USP32Q8NFA0 1604 aa13.24□□□□□ -0.29
C19orf54-210ENST00000600139 ADAMTS2O95450 1211 aa13.24□□□□□ -0.29
C19orf54-210ENST00000600139 RBM6P78332 1123 aaKnown RBP13.24□□□□□ -0.29
C19orf54-210ENST00000600139 WAPLQ7Z5K2 1190 aa13.24□□□□□ -0.29
C19orf54-210ENST00000600139 QTRT2Q9H974 415 aaKnown RBP13.24□□□□□ -0.29
C19orf54-210ENST00000600139 ABCA3Q99758 1704 aa13.24□□□□□ -0.29
C19orf54-210ENST00000600139 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.24□□□□□ -0.29
C19orf54-210ENST00000600139 GLI3P10071 1580 aa13.24□□□□□ -0.29
C19orf54-210ENST00000600139 CCDC144AA2RUR9 1427 aa13.23□□□□□ -0.29
C19orf54-210ENST00000600139 YTHDC2Q9H6S0 1430 aaKnown RBP13.22□□□□□ -0.29
C19orf54-210ENST00000600139 ANKRD30BQ9BXX2 1392 aa13.22□□□□□ -0.29
C19orf54-210ENST00000600139 TMEM132EQ6IEE7 984 aa13.22□□□□□ -0.29
C19orf54-210ENST00000600139 MPHOSPH9Q99550 1183 aa13.22□□□□□ -0.29
C19orf54-210ENST00000600139 ADGRB1O14514 1584 aa13.22□□□□□ -0.29
C19orf54-210ENST00000600139 KIF1AQ12756 1690 aa13.21□□□□□ -0.29
C19orf54-210ENST00000600139 XPCQ01831 940 aaPredicted RBP13.21□□□□□ -0.29
C19orf54-210ENST00000600139 SLIT2O94813 1529 aa13.21□□□□□ -0.29
C19orf54-210ENST00000600139 RGL3Q3MIN7 710 aa13.19□□□□□ -0.3
C19orf54-210ENST00000600139 NGLY1Q96IV0 654 aa13.19□□□□□ -0.3
C19orf54-210ENST00000600139 ADGRB2O60241 1585 aa13.19□□□□□ -0.3
C19orf54-210ENST00000600139 NPHP3Q7Z494 1330 aa13.18□□□□□ -0.3
C19orf54-210ENST00000600139 FOXO3O43524 673 aa13.18□□□□□ -0.3
C19orf54-210ENST00000600139 STK26Q9P289 416 aa13.18□□□□□ -0.3
C19orf54-210ENST00000600139 USP21Q9UK80 565 aa13.18□□□□□ -0.3
C19orf54-210ENST00000600139 TRPM3Q9HCF6 1732 aaPredicted RBP13.18□□□□□ -0.3
C19orf54-210ENST00000600139 SPATA31A3Q5VYP0 1347 aa13.17□□□□□ -0.3
C19orf54-210ENST00000600139 ESCO1Q5FWF5 840 aa13.17□□□□□ -0.3
C19orf54-210ENST00000600139 C14orf93Q9H972 538 aaKnown RBP13.17□□□□□ -0.3
C19orf54-210ENST00000600139 BRWD3Q6RI45 1802 aa13.17□□□□□ -0.3
C19orf54-210ENST00000600139 DLC1Q96QB1 1528 aa13.17□□□□□ -0.3
C19orf54-210ENST00000600139 PLCH1Q4KWH8 1693 aa13.16□□□□□ -0.3
C19orf54-210ENST00000600139 NUTM2FA1L443 756 aa13.16□□□□□ -0.3
C19orf54-210ENST00000600139 CRYBG1Q9Y4K1 1723 aa13.16□□□□□ -0.3
C19orf54-210ENST00000600139 RALGAPBQ86X10 1494 aa13.16□□□□□ -0.3
C19orf54-210ENST00000600139 TRPC5Q9UL62 973 aaPredicted RBP13.15□□□□□ -0.3
C19orf54-210ENST00000600139 NRAPQ86VF7 1730 aa13.15□□□□□ -0.3
C19orf54-210ENST00000600139 CFAP70Q5T0N1 1121 aa13.14□□□□□ -0.31
C19orf54-210ENST00000600139 SIRT1Q96EB6 747 aa13.14□□□□□ -0.31
C19orf54-210ENST00000600139 ATAD2Q6PL18 1390 aa13.14□□□□□ -0.31
C19orf54-210ENST00000600139 ALS2Q96Q42 1657 aa13.14□□□□□ -0.31
C19orf54-210ENST00000600139 TNS3Q68CZ2 1445 aa13.13□□□□□ -0.31
C19orf54-210ENST00000600139 RAB3GAP2Q9H2M9 1393 aa13.12□□□□□ -0.31
C19orf54-210ENST00000600139 NWD2Q9ULI1 1742 aa13.12□□□□□ -0.31
C19orf54-210ENST00000600139 PRR36Q9H6K5 1346 aa13.12□□□□□ -0.31
C19orf54-210ENST00000600139 SBNO1A3KN83 1393 aa13.1□□□□□ -0.31
C19orf54-210ENST00000600139 GJD4Q96KN9 370 aaPredicted RBP13.1□□□□□ -0.31
C19orf54-210ENST00000600139 ANKARQ7Z5J8 1434 aa13.09□□□□□ -0.31
C19orf54-210ENST00000600139 ARHGEF28Q8N1W1 1705 aaKnown RBP13.09□□□□□ -0.31
C19orf54-210ENST00000600139 CABLES1Q8TDN4 633 aa13.09□□□□□ -0.31
C19orf54-210ENST00000600139 PRAM1Q96QH2 718 aa13.09□□□□□ -0.31
C19orf54-210ENST00000600139 DHX57Q6P158 1386 aaKnown RBP13.08□□□□□ -0.31
C19orf54-210ENST00000600139 KRT28Q7Z3Y7 464 aa13.08□□□□□ -0.32
C19orf54-210ENST00000600139 PHF8Q9UPP1 1060 aa13.08□□□□□ -0.32
C19orf54-210ENST00000600139 UNC5CLQ8IV45 518 aa13.07□□□□□ -0.32
C19orf54-210ENST00000600139 TULP4Q9NRJ4 1543 aa13.07□□□□□ -0.32
C19orf54-210ENST00000600139 ATP7BP35670 1465 aa13.05□□□□□ -0.32
C19orf54-210ENST00000600139 ONECUT3O60422 494 aaPredicted RBP13.05□□□□□ -0.32
C19orf54-210ENST00000600139 SAFB2Q14151 953 aaKnown RBP eCLIP13.05□□□□□ -0.32
C19orf54-210ENST00000600139 TOPAZ1Q8N9V7 1692 aa13.05□□□□□ -0.32
C19orf54-210ENST00000600139 THSD7AQ9UPZ6 1657 aa13.05□□□□□ -0.32
C19orf54-210ENST00000600139 BLMP54132 1417 aaPredicted RBP13.04□□□□□ -0.32
C19orf54-210ENST00000600139 FAM83GA6ND36 823 aa13.03□□□□□ -0.32
C19orf54-210ENST00000600139 VPS72Q15906 364 aa13.03□□□□□ -0.32
C19orf54-210ENST00000600139 COL14A1Q05707 1796 aaKnown RBP13.02□□□□□ -0.32
C19orf54-210ENST00000600139 PMFBP1Q8TBY8 1022 aa13.02□□□□□ -0.33
C19orf54-210ENST00000600139 ARHGEF10O15013 1369 aa13.02□□□□□ -0.33
C19orf54-210ENST00000600139 PHRF1Q9P1Y6 1649 aaKnown RBP13.02□□□□□ -0.33
C19orf54-210ENST00000600139 DEFB132Q7Z7B7 95 aa13.01□□□□□ -0.33
C19orf54-210ENST00000600139 SEPT12Q8IYM1 358 aa13.01□□□□□ -0.33
C19orf54-210ENST00000600139 HIRIP3Q9BW71 556 aaPredicted RBP13.01□□□□□ -0.33
C19orf54-210ENST00000600139 ACIN1Q9UKV3 1341 aaKnown RBP13.01□□□□□ -0.33
C19orf54-210ENST00000600139 TNS1Q9HBL0 1735 aaKnown RBP13.01□□□□□ -0.33
C19orf54-210ENST00000600139 TRAK1Q9UPV9 953 aa13□□□□□ -0.33
C19orf54-210ENST00000600139 MINK1Q8N4C8 1332 aaPredicted RBP12.99□□□□□ -0.33
C19orf54-210ENST00000600139 ITSN1Q15811 1721 aa12.99□□□□□ -0.33
C19orf54-210ENST00000600139 LRP5O75197 1615 aa12.99□□□□□ -0.33
C19orf54-210ENST00000600139 CCDC125Q86Z20 511 aa12.98□□□□□ -0.33
C19orf54-210ENST00000600139 KIAA1210Q9ULL0 1709 aa12.97□□□□□ -0.33
C19orf54-210ENST00000600139 WASLO00401 505 aaPredicted RBP12.97□□□□□ -0.33
C19orf54-210ENST00000600139 PLEKHG5O94827 1062 aa12.97□□□□□ -0.33
C19orf54-210ENST00000600139 NRKQ7Z2Y5 1582 aa12.97□□□□□ -0.33
C19orf54-210ENST00000600139 LMO7Q8WWI1 1683 aa12.96□□□□□ -0.33
C19orf54-210ENST00000600139 PSME1Q06323 249 aa12.96□□□□□ -0.33
C19orf54-210ENST00000600139 POGKQ9P215 609 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms