RNA–Protein interactions for RNA: ENST00000599693.5

XRCC1-209, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-209ENST00000599693 CDC42BPGQ6DT37 1551 aa22.67■■□□□ 1.22
XRCC1-209ENST00000599693 TRPC5Q9UL62 973 aaPredicted RBP22.66■■□□□ 1.22
XRCC1-209ENST00000599693 ATRNO75882 1429 aa22.65■■□□□ 1.22
XRCC1-209ENST00000599693 FNBP4Q8N3X1 1017 aaPredicted RBP22.65■■□□□ 1.22
XRCC1-209ENST00000599693 MYOM2P54296 1465 aa22.65■■□□□ 1.22
XRCC1-209ENST00000599693 EP400Q96L91 3159 aa22.64■■□□□ 1.21
XRCC1-209ENST00000599693 MARF1Q9Y4F3 1742 aaKnown RBP22.62■■□□□ 1.21
XRCC1-209ENST00000599693 NPHP3Q7Z494 1330 aa22.61■■□□□ 1.21
XRCC1-209ENST00000599693 PXDNQ92626 1479 aa22.61■■□□□ 1.21
XRCC1-209ENST00000599693 ESCO1Q5FWF5 840 aa22.58■■□□□ 1.21
XRCC1-209ENST00000599693 SLC4A1APQ9BWU0 796 aaKnown RBP22.58■■□□□ 1.21
XRCC1-209ENST00000599693 BCL9LQ86UU0 1499 aa22.57■■□□□ 1.2
XRCC1-209ENST00000599693 TECPR2O15040 1411 aa22.55■■□□□ 1.2
XRCC1-209ENST00000599693 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.54■■□□□ 1.2
XRCC1-209ENST00000599693 KNDC1Q76NI1 1749 aa22.54■■□□□ 1.2
XRCC1-209ENST00000599693 LRPPRCP42704 1394 aaKnown RBP22.53■■□□□ 1.2
XRCC1-209ENST00000599693 IFT172Q9UG01 1749 aa22.53■■□□□ 1.2
XRCC1-209ENST00000599693 FOXO3O43524 673 aa22.52■■□□□ 1.2
XRCC1-209ENST00000599693 XPCQ01831 940 aaPredicted RBP22.52■■□□□ 1.2
XRCC1-209ENST00000599693 FOXD1Q16676 465 aa22.52■■□□□ 1.2
XRCC1-209ENST00000599693 ADGRF5Q8IZF2 1346 aa22.52■■□□□ 1.2
XRCC1-209ENST00000599693 FMN2Q9NZ56 1722 aa22.51■■□□□ 1.19
XRCC1-209ENST00000599693 KIF1AQ12756 1690 aa22.5■■□□□ 1.19
XRCC1-209ENST00000599693 ZRANB1Q9UGI0 708 aa22.5■■□□□ 1.19
XRCC1-209ENST00000599693 CCDC144AA2RUR9 1427 aa22.49■■□□□ 1.19
XRCC1-209ENST00000599693 CCDC125Q86Z20 511 aa22.49■■□□□ 1.19
XRCC1-209ENST00000599693 GJD4Q96KN9 370 aaPredicted RBP22.49■■□□□ 1.19
XRCC1-209ENST00000599693 STK26Q9P289 416 aa22.49■■□□□ 1.19
XRCC1-209ENST00000599693 SPATA31E1Q6ZUB1 1445 aa22.48■■□□□ 1.19
XRCC1-209ENST00000599693 WAPLQ7Z5K2 1190 aa22.48■■□□□ 1.19
XRCC1-209ENST00000599693 NUTM2FA1L443 756 aa22.47■■□□□ 1.19
XRCC1-209ENST00000599693 ABCC11Q96J66 1382 aa22.47■■□□□ 1.19
XRCC1-209ENST00000599693 ANKRD30BQ9BXX2 1392 aa22.47■■□□□ 1.19
XRCC1-209ENST00000599693 SLIT2O94813 1529 aa22.47■■□□□ 1.19
XRCC1-209ENST00000599693 GLI3P10071 1580 aa22.46■■□□□ 1.19
XRCC1-209ENST00000599693 PLEKHH1Q9ULM0 1364 aa22.46■■□□□ 1.19
XRCC1-209ENST00000599693 USP32Q8NFA0 1604 aa22.46■■□□□ 1.19
XRCC1-209ENST00000599693 PIK3C2GO75747 1445 aa22.45■■□□□ 1.18
XRCC1-209ENST00000599693 RALGAPBQ86X10 1494 aa22.45■■□□□ 1.18
XRCC1-209ENST00000599693 SPATA31A3Q5VYP0 1347 aa22.44■■□□□ 1.18
XRCC1-209ENST00000599693 UNC5CLQ8IV45 518 aa22.44■■□□□ 1.18
XRCC1-209ENST00000599693 RGL3Q3MIN7 710 aa22.43■■□□□ 1.18
XRCC1-209ENST00000599693 YTHDC2Q9H6S0 1430 aaKnown RBP22.42■■□□□ 1.18
XRCC1-209ENST00000599693 TMEM132EQ6IEE7 984 aa22.42■■□□□ 1.18
XRCC1-209ENST00000599693 BRWD3Q6RI45 1802 aa22.41■■□□□ 1.18
XRCC1-209ENST00000599693 BLMP54132 1417 aaPredicted RBP22.4■■□□□ 1.18
XRCC1-209ENST00000599693 TNS3Q68CZ2 1445 aa22.39■■□□□ 1.17
XRCC1-209ENST00000599693 RGPD8O14715 1765 aaPredicted RBP22.38■■□□□ 1.17
XRCC1-209ENST00000599693 KRT28Q7Z3Y7 464 aa22.38■■□□□ 1.17
XRCC1-209ENST00000599693 PLCH1Q4KWH8 1693 aa22.38■■□□□ 1.17
XRCC1-209ENST00000599693 ABCA3Q99758 1704 aa22.37■■□□□ 1.17
XRCC1-209ENST00000599693 NWD2Q9ULI1 1742 aa22.37■■□□□ 1.17
XRCC1-209ENST00000599693 SIRT1Q96EB6 747 aa22.36■■□□□ 1.17
XRCC1-209ENST00000599693 MPHOSPH9Q99550 1183 aa22.35■■□□□ 1.17
XRCC1-209ENST00000599693 PHF8Q9UPP1 1060 aa22.34■■□□□ 1.17
XRCC1-209ENST00000599693 NRXN1Q9ULB1 1477 aa22.34■■□□□ 1.17
XRCC1-209ENST00000599693 HAP1P54257 671 aaPredicted RBP22.33■■□□□ 1.17
XRCC1-209ENST00000599693 PSME1Q06323 249 aa22.32■■□□□ 1.16
XRCC1-209ENST00000599693 VPS72Q15906 364 aa22.32■■□□□ 1.16
XRCC1-209ENST00000599693 SBNO1A3KN83 1393 aa22.32■■□□□ 1.16
XRCC1-209ENST00000599693 SEPT12Q8IYM1 358 aa22.31■■□□□ 1.16
XRCC1-209ENST00000599693 C14orf93Q9H972 538 aaKnown RBP22.31■■□□□ 1.16
XRCC1-209ENST00000599693 ARHGEF10O15013 1369 aa22.3■■□□□ 1.16
XRCC1-209ENST00000599693 CABLES1Q8TDN4 633 aa22.3■■□□□ 1.16
XRCC1-209ENST00000599693 DHX57Q6P158 1386 aaKnown RBP22.29■■□□□ 1.16
XRCC1-209ENST00000599693 SF3B2Q13435 895 aaKnown RBP22.29■■□□□ 1.16
XRCC1-209ENST00000599693 DEFB132Q7Z7B7 95 aa22.29■■□□□ 1.16
XRCC1-209ENST00000599693 ONECUT3O60422 494 aaPredicted RBP22.27■■□□□ 1.16
XRCC1-209ENST00000599693 ANKARQ7Z5J8 1434 aa22.27■■□□□ 1.16
XRCC1-209ENST00000599693 DLC1Q96QB1 1528 aa22.26■■□□□ 1.15
XRCC1-209ENST00000599693 NRAPQ86VF7 1730 aa22.26■■□□□ 1.15
XRCC1-209ENST00000599693 ADGRB2O60241 1585 aa22.26■■□□□ 1.15
XRCC1-209ENST00000599693 CFAP70Q5T0N1 1121 aa22.26■■□□□ 1.15
XRCC1-209ENST00000599693 CCDC9Q9Y3X0 531 aaKnown RBP22.26■■□□□ 1.15
XRCC1-209ENST00000599693 LRP5O75197 1615 aa22.25■■□□□ 1.15
XRCC1-209ENST00000599693 PLEKHG5O94827 1062 aa22.25■■□□□ 1.15
XRCC1-209ENST00000599693 LMOD2Q6P5Q4 547 aa22.25■■□□□ 1.15
XRCC1-209ENST00000599693 PRAM1Q96QH2 718 aa22.25■■□□□ 1.15
XRCC1-209ENST00000599693 TRPM3Q9HCF6 1732 aaPredicted RBP22.24■■□□□ 1.15
XRCC1-209ENST00000599693 SAFB2Q14151 953 aaKnown RBP eCLIP22.24■■□□□ 1.15
XRCC1-209ENST00000599693 KRT27Q7Z3Y8 459 aa22.24■■□□□ 1.15
XRCC1-209ENST00000599693 ALS2Q96Q42 1657 aa22.21■■□□□ 1.15
XRCC1-209ENST00000599693 FAM83GA6ND36 823 aa22.21■■□□□ 1.15
XRCC1-209ENST00000599693 PMFBP1Q8TBY8 1022 aa22.2■■□□□ 1.14
XRCC1-209ENST00000599693 POGKQ9P215 609 aa22.2■■□□□ 1.14
XRCC1-209ENST00000599693 COL14A1Q05707 1796 aaKnown RBP22.2■■□□□ 1.14
XRCC1-209ENST00000599693 ACIN1Q9UKV3 1341 aaKnown RBP22.19■■□□□ 1.14
XRCC1-209ENST00000599693 ADGRB1O14514 1584 aa22.19■■□□□ 1.14
XRCC1-209ENST00000599693 A0A0G2JS52 829 aa22.18■■□□□ 1.14
XRCC1-209ENST00000599693 MYT1Q01538 1121 aa22.18■■□□□ 1.14
XRCC1-209ENST00000599693 EIF3AQ14152 1382 aaKnown RBP22.16■■□□□ 1.14
XRCC1-209ENST00000599693 BAG6P46379 1132 aa22.16■■□□□ 1.14
XRCC1-209ENST00000599693 FAM98CQ17RN3 349 aaKnown RBP22.16■■□□□ 1.14
XRCC1-209ENST00000599693 CRYBG1Q9Y4K1 1723 aa22.16■■□□□ 1.14
XRCC1-209ENST00000599693 TULP4Q9NRJ4 1543 aa22.16■■□□□ 1.14
XRCC1-209ENST00000599693 RGPD1P0DJD0 1748 aa22.15■■□□□ 1.14
XRCC1-209ENST00000599693 BTG4Q9NY30 223 aa22.15■■□□□ 1.14
XRCC1-209ENST00000599693 GPRASP1Q5JY77 1395 aa22.14■■□□□ 1.14
XRCC1-209ENST00000599693 PRR36Q9H6K5 1346 aa22.12■■□□□ 1.13
XRCC1-209ENST00000599693 THSD7AQ9UPZ6 1657 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms