RNA–Protein interactions for RNA: ENST00000599335.5

SUPT5H-216, Transcript of SPT5 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT5H, Length 3,796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT5H-216ENST00000599335 AMOTL2Q9Y2J4 779 aa14.78□□□□□ -0.04
SUPT5H-216ENST00000599335 KTN1Q86UP2 1357 aaKnown RBP14.78□□□□□ -0.04
SUPT5H-216ENST00000599335 MYBBP1AQ9BQG0 1328 aaKnown RBP14.77□□□□□ -0.04
SUPT5H-216ENST00000599335 CLTCL1P53675 1640 aa14.77□□□□□ -0.04
SUPT5H-216ENST00000599335 BCORL1Q5H9F3 1711 aa14.77□□□□□ -0.04
SUPT5H-216ENST00000599335 ABCC3O15438 1527 aa14.77□□□□□ -0.05
SUPT5H-216ENST00000599335 NGDNQ8NEJ9 315 aaKnown RBP14.77□□□□□ -0.05
SUPT5H-216ENST00000599335 PRAM1Q96QH2 718 aa14.77□□□□□ -0.05
SUPT5H-216ENST00000599335 B4GALNT3Q6L9W6 998 aa14.76□□□□□ -0.05
SUPT5H-216ENST00000599335 PNISRQ8TF01 805 aaKnown RBP14.76□□□□□ -0.05
SUPT5H-216ENST00000599335 KNSTRNQ9Y448 316 aa14.75□□□□□ -0.05
SUPT5H-216ENST00000599335 ZNF335Q9H4Z2 1342 aaPredicted RBP14.75□□□□□ -0.05
SUPT5H-216ENST00000599335 USP35Q9P2H5 1018 aa14.75□□□□□ -0.05
SUPT5H-216ENST00000599335 NUTM2BA6NNL0 878 aaPredicted RBP14.74□□□□□ -0.05
SUPT5H-216ENST00000599335 NUTM2EB1AL46 878 aaPredicted RBP14.74□□□□□ -0.05
SUPT5H-216ENST00000599335 ESCO1Q5FWF5 840 aa14.74□□□□□ -0.05
SUPT5H-216ENST00000599335 NUTM2AQ8IVF1 878 aaPredicted RBP14.74□□□□□ -0.05
SUPT5H-216ENST00000599335 TESK2Q96S53 571 aa14.74□□□□□ -0.05
SUPT5H-216ENST00000599335 NLRP13Q86W25 1043 aa14.74□□□□□ -0.05
SUPT5H-216ENST00000599335 EFCAB6Q5THR3 1501 aa14.73□□□□□ -0.05
SUPT5H-216ENST00000599335 DISP3Q9P2K9 1392 aa14.73□□□□□ -0.05
SUPT5H-216ENST00000599335 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.73□□□□□ -0.05
SUPT5H-216ENST00000599335 KCNA6P17658 529 aa14.73□□□□□ -0.05
SUPT5H-216ENST00000599335 TET3O43151 1660 aa14.72□□□□□ -0.05
SUPT5H-216ENST00000599335 VWDEQ8N2E2 1590 aa14.72□□□□□ -0.05
SUPT5H-216ENST00000599335 HSP90B1P14625 803 aaKnown RBP14.72□□□□□ -0.05
SUPT5H-216ENST00000599335 CABP2Q9NPB3 220 aa14.72□□□□□ -0.05
SUPT5H-216ENST00000599335 PPP4R2Q9NY27 417 aa14.72□□□□□ -0.05
SUPT5H-216ENST00000599335 DMRT2Q9Y5R5 561 aa14.72□□□□□ -0.05
SUPT5H-216ENST00000599335 SIGLEC1Q9BZZ2 1709 aa14.72□□□□□ -0.05
SUPT5H-216ENST00000599335 DEPDC5O75140 1603 aa14.72□□□□□ -0.05
SUPT5H-216ENST00000599335 TRPM2O94759 1503 aa14.72□□□□□ -0.05
SUPT5H-216ENST00000599335 NUDCQ9Y266 331 aa14.71□□□□□ -0.05
SUPT5H-216ENST00000599335 NCLP19338 710 aaKnown RBP14.7□□□□□ -0.06
SUPT5H-216ENST00000599335 CDCA8Q53HL2 280 aa14.7□□□□□ -0.06
SUPT5H-216ENST00000599335 ZFP91Q96JP5 570 aaPredicted RBP14.7□□□□□ -0.06
SUPT5H-216ENST00000599335 CCDC9Q9Y3X0 531 aaKnown RBP14.7□□□□□ -0.06
SUPT5H-216ENST00000599335 RNF17Q9BXT8 1623 aaKnown RBP14.69□□□□□ -0.06
SUPT5H-216ENST00000599335 LAS1LQ9Y4W2 734 aaKnown RBP14.69□□□□□ -0.06
SUPT5H-216ENST00000599335 SPHKAPQ2M3C7 1700 aa14.69□□□□□ -0.06
SUPT5H-216ENST00000599335 PLCD3Q8N3E9 789 aa14.69□□□□□ -0.06
SUPT5H-216ENST00000599335 PTPRMP28827 1452 aa14.69□□□□□ -0.06
SUPT5H-216ENST00000599335 FOXO3O43524 673 aa14.68□□□□□ -0.06
SUPT5H-216ENST00000599335 ZBTB47Q9UFB7 747 aaPredicted RBP14.68□□□□□ -0.06
SUPT5H-216ENST00000599335 BRD4O60885 1362 aaPredicted RBP14.68□□□□□ -0.06
SUPT5H-216ENST00000599335 CFAP44Q96MT7 982 aa14.68□□□□□ -0.06
SUPT5H-216ENST00000599335 C14orf93Q9H972 538 aaKnown RBP14.68□□□□□ -0.06
SUPT5H-216ENST00000599335 EIF2AK4Q9P2K8 1649 aaKnown RBP14.67□□□□□ -0.06
SUPT5H-216ENST00000599335 DDX17Q92841 729 aaKnown RBP14.67□□□□□ -0.06
SUPT5H-216ENST00000599335 RRP9O43818 475 aaKnown RBP14.67□□□□□ -0.06
SUPT5H-216ENST00000599335 WDR43Q15061 677 aaKnown RBP eCLIP14.67□□□□□ -0.06
SUPT5H-216ENST00000599335 BRPF3Q9ULD4 1205 aa14.67□□□□□ -0.06
SUPT5H-216ENST00000599335 ANP32AP39687 249 aaKnown RBP14.67□□□□□ -0.06
SUPT5H-216ENST00000599335 PSME1Q06323 249 aa14.66□□□□□ -0.06
SUPT5H-216ENST00000599335 PER1O15534 1290 aaPredicted RBP14.65□□□□□ -0.06
SUPT5H-216ENST00000599335 RIMS2Q9UQ26 1411 aa14.65□□□□□ -0.06
SUPT5H-216ENST00000599335 IPO4Q8TEX9 1081 aaKnown RBP14.65□□□□□ -0.06
SUPT5H-216ENST00000599335 SLC12A5Q9H2X9 1139 aa14.64□□□□□ -0.07
SUPT5H-216ENST00000599335 GPRASP1Q5JY77 1395 aa14.64□□□□□ -0.07
SUPT5H-216ENST00000599335 BCCIPQ9P287 314 aaKnown RBP eCLIP14.64□□□□□ -0.07
SUPT5H-216ENST00000599335 ZMYM4Q5VZL5 1548 aa14.64□□□□□ -0.07
SUPT5H-216ENST00000599335 RGS3P49796 1198 aa14.63□□□□□ -0.07
SUPT5H-216ENST00000599335 LMTK3Q96Q04 1460 aa14.63□□□□□ -0.07
SUPT5H-216ENST00000599335 SYNMO15061 1565 aa14.63□□□□□ -0.07
SUPT5H-216ENST00000599335 LMTK2Q8IWU2 1503 aa14.63□□□□□ -0.07
SUPT5H-216ENST00000599335 CAMSAP1Q5T5Y3 1602 aa14.63□□□□□ -0.07
SUPT5H-216ENST00000599335 LTV1Q96GA3 475 aaPredicted RBP14.62□□□□□ -0.07
SUPT5H-216ENST00000599335 EIF3AQ14152 1382 aaKnown RBP14.62□□□□□ -0.07
SUPT5H-216ENST00000599335 STAC3Q96MF2 364 aa14.62□□□□□ -0.07
SUPT5H-216ENST00000599335 CLTCQ00610 1675 aaKnown RBP14.62□□□□□ -0.07
SUPT5H-216ENST00000599335 CENPJQ9HC77 1338 aaPredicted RBP14.62□□□□□ -0.07
SUPT5H-216ENST00000599335 TRPM1Q7Z4N2 1603 aa14.61□□□□□ -0.07
SUPT5H-216ENST00000599335 MROH2AA6NES4 1674 aa14.61□□□□□ -0.07
SUPT5H-216ENST00000599335 ADAMTS2O95450 1211 aa14.61□□□□□ -0.07
SUPT5H-216ENST00000599335 MEX3CQ5U5Q3 659 aaKnown RBP14.61□□□□□ -0.07
SUPT5H-216ENST00000599335 PRDM10Q9NQV6 1147 aa14.6□□□□□ -0.07
SUPT5H-216ENST00000599335 ERVK-7P63135 1459 aa14.6□□□□□ -0.07
SUPT5H-216ENST00000599335 POLR1AO95602 1720 aaPredicted RBP14.6□□□□□ -0.07
SUPT5H-216ENST00000599335 CDCA7LQ96GN5 454 aa14.6□□□□□ -0.07
SUPT5H-216ENST00000599335 RPGRIP1LQ68CZ1 1315 aa14.59□□□□□ -0.07
SUPT5H-216ENST00000599335 TMEM2Q9UHN6 1383 aa14.59□□□□□ -0.07
SUPT5H-216ENST00000599335 WWC1Q8IX03 1113 aa14.59□□□□□ -0.07
SUPT5H-216ENST00000599335 SMG6Q86US8 1419 aaKnown RBP14.59□□□□□ -0.07
SUPT5H-216ENST00000599335 CNPY4Q8N129 248 aa14.59□□□□□ -0.07
SUPT5H-216ENST00000599335 PARD3Q8TEW0 1356 aa14.59□□□□□ -0.07
SUPT5H-216ENST00000599335 RIMS1Q86UR5 1692 aaKnown RBP14.58□□□□□ -0.07
SUPT5H-216ENST00000599335 PATL2C9JE40 543 aaKnown RBP14.58□□□□□ -0.07
SUPT5H-216ENST00000599335 ARHGAP31Q2M1Z3 1444 aa14.58□□□□□ -0.07
SUPT5H-216ENST00000599335 RCAN3Q9UKA8 241 aa14.58□□□□□ -0.07
SUPT5H-216ENST00000599335 CNKSR2Q8WXI2 1034 aa14.58□□□□□ -0.08
SUPT5H-216ENST00000599335 ADAMTS8Q9UP79 889 aa14.58□□□□□ -0.08
SUPT5H-216ENST00000599335 MADDQ8WXG6 1647 aa14.58□□□□□ -0.08
SUPT5H-216ENST00000599335 FTSJ3Q8IY81 847 aaKnown RBP14.57□□□□□ -0.08
SUPT5H-216ENST00000599335 FBXO3Q9UK99 471 aa14.57□□□□□ -0.08
SUPT5H-216ENST00000599335 ARHGEF40Q8TER5 1519 aa14.57□□□□□ -0.08
SUPT5H-216ENST00000599335 SCAF11Q99590 1463 aaKnown RBP14.57□□□□□ -0.08
SUPT5H-216ENST00000599335 KIF1BO60333 1816 aa14.57□□□□□ -0.08
SUPT5H-216ENST00000599335 CDK19Q9BWU1 502 aa14.57□□□□□ -0.08
SUPT5H-216ENST00000599335 TOM1O60784 492 aa14.57□□□□□ -0.08
SUPT5H-216ENST00000599335 PPP2R1AP30153 589 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms