RNA–Protein interactions for RNA: ENST00000599225.1

LTBP4-225, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 281 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-225ENST00000599225 CDC42BPGQ6DT37 1551 aa23.84■■□□□ 1.41
LTBP4-225ENST00000599225 STK26Q9P289 416 aa23.84■■□□□ 1.41
LTBP4-225ENST00000599225 SOS2Q07890 1332 aaPredicted RBP23.84■■□□□ 1.41
LTBP4-225ENST00000599225 WAPLQ7Z5K2 1190 aa23.83■■□□□ 1.41
LTBP4-225ENST00000599225 YTHDC2Q9H6S0 1430 aaKnown RBP23.83■■□□□ 1.4
LTBP4-225ENST00000599225 KNDC1Q76NI1 1749 aa23.82■■□□□ 1.4
LTBP4-225ENST00000599225 PNPLA6Q8IY17 1366 aa23.82■■□□□ 1.4
LTBP4-225ENST00000599225 MEX3CQ5U5Q3 659 aaKnown RBP23.81■■□□□ 1.4
LTBP4-225ENST00000599225 ZNF772Q68DY9 489 aaPredicted RBP23.8■■□□□ 1.4
LTBP4-225ENST00000599225 CFAP70Q5T0N1 1121 aa23.79■■□□□ 1.4
LTBP4-225ENST00000599225 PLEKHH1Q9ULM0 1364 aa23.78■■□□□ 1.4
LTBP4-225ENST00000599225 STAC3Q96MF2 364 aa23.77■■□□□ 1.4
LTBP4-225ENST00000599225 DHX57Q6P158 1386 aaKnown RBP23.77■■□□□ 1.4
LTBP4-225ENST00000599225 NUTM2BA6NNL0 878 aaPredicted RBP23.76■■□□□ 1.39
LTBP4-225ENST00000599225 NUTM2EB1AL46 878 aaPredicted RBP23.76■■□□□ 1.39
LTBP4-225ENST00000599225 NUTM2AQ8IVF1 878 aaPredicted RBP23.76■■□□□ 1.39
LTBP4-225ENST00000599225 ESCO1Q5FWF5 840 aa23.74■■□□□ 1.39
LTBP4-225ENST00000599225 NPHP3Q7Z494 1330 aa23.74■■□□□ 1.39
LTBP4-225ENST00000599225 PXDNQ92626 1479 aa23.7■■□□□ 1.38
LTBP4-225ENST00000599225 ADGRB1O14514 1584 aa23.69■■□□□ 1.38
LTBP4-225ENST00000599225 DLC1Q96QB1 1528 aa23.69■■□□□ 1.38
LTBP4-225ENST00000599225 AFF2P51816 1311 aa23.69■■□□□ 1.38
LTBP4-225ENST00000599225 FOXO3O43524 673 aa23.69■■□□□ 1.38
LTBP4-225ENST00000599225 DCAF11Q8TEB1 546 aa23.68■■□□□ 1.38
LTBP4-225ENST00000599225 FMN2Q9NZ56 1722 aa23.67■■□□□ 1.38
LTBP4-225ENST00000599225 PRAM1Q96QH2 718 aa23.67■■□□□ 1.38
LTBP4-225ENST00000599225 RXRBP28702 533 aa23.66■■□□□ 1.38
LTBP4-225ENST00000599225 C8orf37Q96NL8 207 aa23.66■■□□□ 1.38
LTBP4-225ENST00000599225 COL22A1Q8NFW1 1626 aaPredicted RBP23.66■■□□□ 1.38
LTBP4-225ENST00000599225 NUTM2FA1L443 756 aa23.65■■□□□ 1.38
LTBP4-225ENST00000599225 CDK12Q9NYV4 1490 aaPredicted RBP23.64■■□□□ 1.38
LTBP4-225ENST00000599225 KDM2AQ9Y2K7 1162 aa23.64■■□□□ 1.37
LTBP4-225ENST00000599225 ADAMTS2O95450 1211 aa23.61■■□□□ 1.37
LTBP4-225ENST00000599225 NGLY1Q96IV0 654 aa23.61■■□□□ 1.37
LTBP4-225ENST00000599225 POGKQ9P215 609 aa23.61■■□□□ 1.37
LTBP4-225ENST00000599225 XPCQ01831 940 aaPredicted RBP23.6■■□□□ 1.37
LTBP4-225ENST00000599225 FNBP4Q8N3X1 1017 aaPredicted RBP23.6■■□□□ 1.37
LTBP4-225ENST00000599225 QTRT2Q9H974 415 aaKnown RBP23.6■■□□□ 1.37
LTBP4-225ENST00000599225 KIF1AQ12756 1690 aa23.6■■□□□ 1.37
LTBP4-225ENST00000599225 SAFB2Q14151 953 aaKnown RBP eCLIP23.59■■□□□ 1.37
LTBP4-225ENST00000599225 TRAK1Q9UPV9 953 aa23.59■■□□□ 1.37
LTBP4-225ENST00000599225 SPATA31A3Q5VYP0 1347 aa23.59■■□□□ 1.37
LTBP4-225ENST00000599225 ADGRB2O60241 1585 aa23.58■■□□□ 1.37
LTBP4-225ENST00000599225 PHF8Q9UPP1 1060 aa23.58■■□□□ 1.37
LTBP4-225ENST00000599225 ANKARQ7Z5J8 1434 aa23.58■■□□□ 1.36
LTBP4-225ENST00000599225 RBM6P78332 1123 aaKnown RBP23.57■■□□□ 1.36
LTBP4-225ENST00000599225 KRT28Q7Z3Y7 464 aa23.56■■□□□ 1.36
LTBP4-225ENST00000599225 RGPD8O14715 1765 aaPredicted RBP23.53■■□□□ 1.36
LTBP4-225ENST00000599225 PSME1Q06323 249 aa23.53■■□□□ 1.36
LTBP4-225ENST00000599225 USP21Q9UK80 565 aa23.53■■□□□ 1.36
LTBP4-225ENST00000599225 SBNO1A3KN83 1393 aa23.52■■□□□ 1.36
LTBP4-225ENST00000599225 TRPC5Q9UL62 973 aaPredicted RBP23.51■■□□□ 1.35
LTBP4-225ENST00000599225 USP32Q8NFA0 1604 aa23.51■■□□□ 1.35
LTBP4-225ENST00000599225 EIF3AQ14152 1382 aaKnown RBP23.51■■□□□ 1.35
LTBP4-225ENST00000599225 WASLO00401 505 aaPredicted RBP23.5■■□□□ 1.35
LTBP4-225ENST00000599225 UPF1Q92900 1129 aaKnown RBP eCLIP23.5■■□□□ 1.35
LTBP4-225ENST00000599225 TNS3Q68CZ2 1445 aa23.5■■□□□ 1.35
LTBP4-225ENST00000599225 HIRIP3Q9BW71 556 aaPredicted RBP23.49■■□□□ 1.35
LTBP4-225ENST00000599225 MINK1Q8N4C8 1332 aaPredicted RBP23.49■■□□□ 1.35
LTBP4-225ENST00000599225 RGS12O14924 1447 aa23.49■■□□□ 1.35
LTBP4-225ENST00000599225 ATRNO75882 1429 aa23.49■■□□□ 1.35
LTBP4-225ENST00000599225 BCL9LQ86UU0 1499 aa23.49■■□□□ 1.35
LTBP4-225ENST00000599225 PRR36Q9H6K5 1346 aa23.47■■□□□ 1.35
LTBP4-225ENST00000599225 TULP4Q9NRJ4 1543 aa23.47■■□□□ 1.35
LTBP4-225ENST00000599225 MARF1Q9Y4F3 1742 aaKnown RBP23.47■■□□□ 1.35
LTBP4-225ENST00000599225 KIAA1210Q9ULL0 1709 aa23.46■■□□□ 1.35
LTBP4-225ENST00000599225 ARHGEF10O15013 1369 aa23.45■■□□□ 1.34
LTBP4-225ENST00000599225 PMFBP1Q8TBY8 1022 aa23.45■■□□□ 1.34
LTBP4-225ENST00000599225 ARHGEF28Q8N1W1 1705 aaKnown RBP23.45■■□□□ 1.34
LTBP4-225ENST00000599225 SLIT2O94813 1529 aa23.43■■□□□ 1.34
LTBP4-225ENST00000599225 EP400Q96L91 3159 aa23.41■■□□□ 1.34
LTBP4-225ENST00000599225 NBPF1Q3BBV0 1214 aa23.41■■□□□ 1.34
LTBP4-225ENST00000599225 UNC5CLQ8IV45 518 aa23.4■■□□□ 1.34
LTBP4-225ENST00000599225 GPRASP1Q5JY77 1395 aa23.4■■□□□ 1.34
LTBP4-225ENST00000599225 GJD4Q96KN9 370 aaPredicted RBP23.39■■□□□ 1.33
LTBP4-225ENST00000599225 ATP7BP35670 1465 aa23.38■■□□□ 1.33
LTBP4-225ENST00000599225 CABLES1Q8TDN4 633 aa23.38■■□□□ 1.33
LTBP4-225ENST00000599225 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.38■■□□□ 1.33
LTBP4-225ENST00000599225 TRPM3Q9HCF6 1732 aaPredicted RBP23.38■■□□□ 1.33
LTBP4-225ENST00000599225 L3MBTL2Q969R5 705 aa23.37■■□□□ 1.33
LTBP4-225ENST00000599225 NUDT16Q96DE0 195 aaKnown RBP23.37■■□□□ 1.33
LTBP4-225ENST00000599225 CDK19Q9BWU1 502 aa23.36■■□□□ 1.33
LTBP4-225ENST00000599225 LMOD2Q6P5Q4 547 aa23.35■■□□□ 1.33
LTBP4-225ENST00000599225 HAP1P54257 671 aaPredicted RBP23.34■■□□□ 1.33
LTBP4-225ENST00000599225 NGDNQ8NEJ9 315 aaKnown RBP23.34■■□□□ 1.33
LTBP4-225ENST00000599225 ALS2Q96Q42 1657 aa23.34■■□□□ 1.33
LTBP4-225ENST00000599225 ATAD2Q6PL18 1390 aa23.32■■□□□ 1.32
LTBP4-225ENST00000599225 SIN3AQ96ST3 1273 aa23.32■■□□□ 1.32
LTBP4-225ENST00000599225 CCDC61Q9Y6R9 512 aa23.32■■□□□ 1.32
LTBP4-225ENST00000599225 ABCA3Q99758 1704 aa23.32■■□□□ 1.32
LTBP4-225ENST00000599225 POLR3AO14802 1390 aaPredicted RBP23.31■■□□□ 1.32
LTBP4-225ENST00000599225 PLEKHG3A1L390 1219 aa23.31■■□□□ 1.32
LTBP4-225ENST00000599225 FAM83GA6ND36 823 aa23.31■■□□□ 1.32
LTBP4-225ENST00000599225 ITSN1Q15811 1721 aa23.3■■□□□ 1.32
LTBP4-225ENST00000599225 RALGAPBQ86X10 1494 aa23.3■■□□□ 1.32
LTBP4-225ENST00000599225 VPS72Q15906 364 aa23.3■■□□□ 1.32
LTBP4-225ENST00000599225 CENPJQ9HC77 1338 aaPredicted RBP23.3■■□□□ 1.32
LTBP4-225ENST00000599225 NWD2Q9ULI1 1742 aa23.29■■□□□ 1.32
LTBP4-225ENST00000599225 GLI3P10071 1580 aa23.28■■□□□ 1.32
LTBP4-225ENST00000599225 ONECUT3O60422 494 aaPredicted RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms