RNA–Protein interactions for RNA: ENST00000598969.5

COPE-208, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 5

Gene COPE, Length 1,770 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-208ENST00000598969 SLC24A1O60721 1099 aa29.13■■■□□ 2.25
COPE-208ENST00000598969 MINK1Q8N4C8 1332 aaPredicted RBP29.11■■■□□ 2.25
COPE-208ENST00000598969 TULP4Q9NRJ4 1543 aa29.1■■■□□ 2.25
COPE-208ENST00000598969 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.07■■■□□ 2.24
COPE-208ENST00000598969 AEBP2Q6ZN18 517 aaPredicted RBP29.06■■■□□ 2.24
COPE-208ENST00000598969 STRCP1A6NGW2 1772 aa29.06■■■□□ 2.24
COPE-208ENST00000598969 POLR3GLQ9BT43 218 aa29.06■■■□□ 2.24
COPE-208ENST00000598969 EVC2Q86UK5 1308 aa29.05■■■□□ 2.24
COPE-208ENST00000598969 DMRT2Q9Y5R5 561 aa29.05■■■□□ 2.24
COPE-208ENST00000598969 DDX10Q13206 875 aaKnown RBP29.04■■■□□ 2.24
COPE-208ENST00000598969 CDCA8Q53HL2 280 aa29.03■■■□□ 2.24
COPE-208ENST00000598969 NKTRP30414 1462 aaKnown RBP29.03■■■□□ 2.24
COPE-208ENST00000598969 ADGRB2O60241 1585 aa29.01■■■□□ 2.23
COPE-208ENST00000598969 PUS7Q96PZ0 661 aaKnown RBP28.98■■■□□ 2.23
COPE-208ENST00000598969 CDK19Q9BWU1 502 aa28.98■■■□□ 2.23
COPE-208ENST00000598969 RBM33Q96EV2 1170 aaKnown RBP28.98■■■□□ 2.23
COPE-208ENST00000598969 WASLO00401 505 aaPredicted RBP28.97■■■□□ 2.23
COPE-208ENST00000598969 CABP2Q9NPB3 220 aa28.97■■■□□ 2.23
COPE-208ENST00000598969 ZNF335Q9H4Z2 1342 aaPredicted RBP28.97■■■□□ 2.23
COPE-208ENST00000598969 PROSER2Q86WR7 435 aaPredicted RBP28.96■■■□□ 2.23
COPE-208ENST00000598969 SRPK2P78362 688 aaKnown RBP28.94■■■□□ 2.22
COPE-208ENST00000598969 NALCNQ8IZF0 1738 aa28.94■■■□□ 2.22
COPE-208ENST00000598969 MYOM1P52179 1685 aa28.94■■■□□ 2.22
COPE-208ENST00000598969 ADGRL3Q9HAR2 1447 aa28.92■■■□□ 2.22
COPE-208ENST00000598969 TMEM94Q12767 1356 aa28.89■■■□□ 2.21
COPE-208ENST00000598969 ATAD2Q6PL18 1390 aa28.89■■■□□ 2.21
COPE-208ENST00000598969 CDC42BPGQ6DT37 1551 aa28.87■■■□□ 2.21
COPE-208ENST00000598969 NCOA3Q9Y6Q9 1424 aa28.86■■■□□ 2.21
COPE-208ENST00000598969 LRRC7Q96NW7 1537 aa28.86■■■□□ 2.21
COPE-208ENST00000598969 PRR36Q9H6K5 1346 aa28.85■■■□□ 2.21
COPE-208ENST00000598969 SLC12A5Q9H2X9 1139 aa28.85■■■□□ 2.21
COPE-208ENST00000598969 ATP7BP35670 1465 aa28.84■■■□□ 2.21
COPE-208ENST00000598969 NUDT16Q96DE0 195 aaKnown RBP28.83■■■□□ 2.21
COPE-208ENST00000598969 C14orf37Q86TY3 774 aa28.83■■■□□ 2.21
COPE-208ENST00000598969 MIER1Q8N108 512 aa28.83■■■□□ 2.21
COPE-208ENST00000598969 TMC1Q8TDI8 760 aa28.83■■■□□ 2.21
COPE-208ENST00000598969 PANK3Q9H999 370 aa28.83■■■□□ 2.21
COPE-208ENST00000598969 XIRP1Q702N8 1843 aaKnown RBP28.83■■■□□ 2.21
COPE-208ENST00000598969 FMN2Q9NZ56 1722 aa28.82■■■□□ 2.2
COPE-208ENST00000598969 USP32Q8NFA0 1604 aa28.82■■■□□ 2.2
COPE-208ENST00000598969 NINLQ9Y2I6 1382 aa28.8■■■□□ 2.2
COPE-208ENST00000598969 NUTM2FA1L443 756 aa28.8■■■□□ 2.2
COPE-208ENST00000598969 C19orf44Q9H6X5 657 aa28.79■■■□□ 2.2
COPE-208ENST00000598969 CABP1Q9NZU7 370 aa28.78■■■□□ 2.2
COPE-208ENST00000598969 CCDC61Q9Y6R9 512 aa28.78■■■□□ 2.2
COPE-208ENST00000598969 TOPAZ1Q8N9V7 1692 aa28.77■■■□□ 2.2
COPE-208ENST00000598969 ANKARQ7Z5J8 1434 aa28.77■■■□□ 2.2
COPE-208ENST00000598969 PER1O15534 1290 aaPredicted RBP28.76■■■□□ 2.19
COPE-208ENST00000598969 PPIP5K1Q6PFW1 1433 aa28.76■■■□□ 2.19
COPE-208ENST00000598969 LTBP4Q8N2S1 1624 aa28.76■■■□□ 2.19
COPE-208ENST00000598969 CD163L1Q9NR16 1453 aa28.75■■■□□ 2.19
COPE-208ENST00000598969 DCCP43146 1447 aa28.74■■■□□ 2.19
COPE-208ENST00000598969 RGPD8O14715 1765 aaPredicted RBP28.73■■■□□ 2.19
COPE-208ENST00000598969 ANKRD36BQ8N2N9 1353 aa28.73■■■□□ 2.19
COPE-208ENST00000598969 CARD14Q9BXL6 1004 aa28.73■■■□□ 2.19
COPE-208ENST00000598969 A0A1W2PP64 1363 aa28.71■■■□□ 2.19
COPE-208ENST00000598969 MSH6P52701 1360 aa28.71■■■□□ 2.19
COPE-208ENST00000598969 PLEKHG3A1L390 1219 aa28.7■■■□□ 2.18
COPE-208ENST00000598969 ITSN1Q15811 1721 aa28.7■■■□□ 2.18
COPE-208ENST00000598969 CPSF1Q10570 1443 aaKnown RBP28.68■■■□□ 2.18
COPE-208ENST00000598969 TERF2IPQ9NYB0 399 aa28.67■■■□□ 2.18
COPE-208ENST00000598969 ATF3P18847 181 aa28.67■■■□□ 2.18
COPE-208ENST00000598969 MST1RQ04912 1400 aa28.66■■■□□ 2.18
COPE-208ENST00000598969 CADPS2Q86UW7 1296 aa28.65■■■□□ 2.18
COPE-208ENST00000598969 NSD3Q9BZ95 1437 aa28.65■■■□□ 2.18
COPE-208ENST00000598969 C1orf167Q5SNV9 1468 aa28.65■■■□□ 2.18
COPE-208ENST00000598969 HDGFL2Q7Z4V5 671 aaPredicted RBP28.65■■■□□ 2.18
COPE-208ENST00000598969 KNSTRNQ9Y448 316 aa28.64■■■□□ 2.18
COPE-208ENST00000598969 PMFBP1Q8TBY8 1022 aa28.63■■■□□ 2.17
COPE-208ENST00000598969 ACEP12821 1306 aa28.63■■■□□ 2.17
COPE-208ENST00000598969 AKAP12Q02952 1782 aa28.63■■■□□ 2.17
COPE-208ENST00000598969 ANP32CO43423 234 aa28.62■■■□□ 2.17
COPE-208ENST00000598969 AMER1Q5JTC6 1135 aaPredicted RBP28.62■■■□□ 2.17
COPE-208ENST00000598969 POLR3AO14802 1390 aaPredicted RBP28.61■■■□□ 2.17
COPE-208ENST00000598969 ORAI2Q96SN7 254 aa28.6■■■□□ 2.17
COPE-208ENST00000598969 PHF8Q9UPP1 1060 aa28.6■■■□□ 2.17
COPE-208ENST00000598969 KTN1Q86UP2 1357 aaKnown RBP28.59■■■□□ 2.17
COPE-208ENST00000598969 MON2Q7Z3U7 1717 aa28.59■■■□□ 2.17
COPE-208ENST00000598969 ESCO1Q5FWF5 840 aa28.59■■■□□ 2.17
COPE-208ENST00000598969 ZNF692Q9BU19 519 aaPredicted RBP28.58■■■□□ 2.17
COPE-208ENST00000598969 NPC1L1Q9UHC9 1359 aa28.57■■■□□ 2.16
COPE-208ENST00000598969 CNGB1Q14028 1251 aaPredicted RBP28.56■■■□□ 2.16
COPE-208ENST00000598969 NGDNQ8NEJ9 315 aaKnown RBP28.56■■■□□ 2.16
COPE-208ENST00000598969 PRKRIP1Q9H875 184 aaPredicted RBP28.56■■■□□ 2.16
COPE-208ENST00000598969 EDC4Q6P2E9 1401 aaKnown RBP28.55■■■□□ 2.16
COPE-208ENST00000598969 USP6P35125 1406 aa28.54■■■□□ 2.16
COPE-208ENST00000598969 CC2D1BQ5T0F9 858 aaKnown RBP28.54■■■□□ 2.16
COPE-208ENST00000598969 CGNL1Q0VF96 1302 aa28.53■■■□□ 2.16
COPE-208ENST00000598969 NRKQ7Z2Y5 1582 aa28.52■■■□□ 2.16
COPE-208ENST00000598969 SLAIN2Q9P270 581 aa28.52■■■□□ 2.16
COPE-208ENST00000598969 SSH2Q76I76 1423 aa28.52■■■□□ 2.16
COPE-208ENST00000598969 KIF1AQ12756 1690 aa28.51■■■□□ 2.15
COPE-208ENST00000598969 PARD3Q8TEW0 1356 aa28.5■■■□□ 2.15
COPE-208ENST00000598969 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.49■■■□□ 2.15
COPE-208ENST00000598969 FYB1O15117 783 aa28.48■■■□□ 2.15
COPE-208ENST00000598969 TTC21BQ7Z4L5 1316 aa28.48■■■□□ 2.15
COPE-208ENST00000598969 NSD2O96028 1365 aa28.46■■■□□ 2.15
COPE-208ENST00000598969 FOXO3O43524 673 aa28.46■■■□□ 2.15
COPE-208ENST00000598969 RALBP1Q15311 655 aa28.46■■■□□ 2.15
COPE-208ENST00000598969 BRINP3Q76B58 766 aa28.45■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms