RNA–Protein interactions for RNA: ENST00000598607.1

GTF2F1-206, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 4

Gene GTF2F1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-206ENST00000598607 CDC42BPGQ6DT37 1551 aa21.48■■□□□ 1.03
GTF2F1-206ENST00000598607 PRAM1Q96QH2 718 aa21.47■■□□□ 1.03
GTF2F1-206ENST00000598607 PLEKHH1Q9ULM0 1364 aa21.47■■□□□ 1.03
GTF2F1-206ENST00000598607 QRICH2Q9H0J4 1663 aa21.47■■□□□ 1.03
GTF2F1-206ENST00000598607 ADGRB2O60241 1585 aa21.46■■□□□ 1.03
GTF2F1-206ENST00000598607 ATF3P18847 181 aa21.46■■□□□ 1.03
GTF2F1-206ENST00000598607 CADPS2Q86UW7 1296 aa21.46■■□□□ 1.03
GTF2F1-206ENST00000598607 EIF3AQ14152 1382 aaKnown RBP21.46■■□□□ 1.03
GTF2F1-206ENST00000598607 FBXO41Q8TF61 875 aa21.45■■□□□ 1.02
GTF2F1-206ENST00000598607 CARD11Q9BXL7 1154 aa21.45■■□□□ 1.02
GTF2F1-206ENST00000598607 FMN2Q9NZ56 1722 aa21.44■■□□□ 1.02
GTF2F1-206ENST00000598607 SAFB2Q14151 953 aaKnown RBP eCLIP21.41■■□□□ 1.02
GTF2F1-206ENST00000598607 CENPJQ9HC77 1338 aaPredicted RBP21.4■■□□□ 1.02
GTF2F1-206ENST00000598607 ROBO1Q9Y6N7 1651 aa21.4■■□□□ 1.02
GTF2F1-206ENST00000598607 RGPD8O14715 1765 aaPredicted RBP21.39■■□□□ 1.01
GTF2F1-206ENST00000598607 SLAIN2Q9P270 581 aa21.38■■□□□ 1.01
GTF2F1-206ENST00000598607 MST1RQ04912 1400 aa21.38■■□□□ 1.01
GTF2F1-206ENST00000598607 SCAF1Q9H7N4 1312 aaKnown RBP21.37■■□□□ 1.01
GTF2F1-206ENST00000598607 MINK1Q8N4C8 1332 aaPredicted RBP21.36■■□□□ 1.01
GTF2F1-206ENST00000598607 PIP4K2BP78356 416 aa21.36■■□□□ 1.01
GTF2F1-206ENST00000598607 ITSN1Q15811 1721 aa21.35■■□□□ 1.01
GTF2F1-206ENST00000598607 C1orf167Q5SNV9 1468 aa21.32■■□□□ 1
GTF2F1-206ENST00000598607 HIRIP3Q9BW71 556 aaPredicted RBP21.32■■□□□ 1
GTF2F1-206ENST00000598607 KIF1AQ12756 1690 aa21.31■■□□□ 1
GTF2F1-206ENST00000598607 TULP4Q9NRJ4 1543 aa21.31■■□□□ 1
GTF2F1-206ENST00000598607 USP32Q8NFA0 1604 aa21.31■■□□□ 1
GTF2F1-206ENST00000598607 WASLO00401 505 aaPredicted RBP21.31■■□□□ 1
GTF2F1-206ENST00000598607 USP47Q96K76 1375 aa21.31■■□□□ 1
GTF2F1-206ENST00000598607 SBNO2Q9Y2G9 1366 aa21.31■■□□□ 1
GTF2F1-206ENST00000598607 ANKARQ7Z5J8 1434 aa21.3■■□□□ 1
GTF2F1-206ENST00000598607 NHSL1Q5SYE7 1610 aa21.29■■□□□ 1
GTF2F1-206ENST00000598607 PHLPP1O60346 1717 aa21.29■■□□□ 1
GTF2F1-206ENST00000598607 SLC24A1O60721 1099 aa21.27■■□□□ 1
GTF2F1-206ENST00000598607 AHDC1Q5TGY3 1603 aaPredicted RBP21.26■□□□□ 0.99
GTF2F1-206ENST00000598607 TOPAZ1Q8N9V7 1692 aa21.26■□□□□ 0.99
GTF2F1-206ENST00000598607 NUTM2FA1L443 756 aa21.26■□□□□ 0.99
GTF2F1-206ENST00000598607 EVC2Q86UK5 1308 aa21.26■□□□□ 0.99
GTF2F1-206ENST00000598607 BRINP3Q76B58 766 aa21.25■□□□□ 0.99
GTF2F1-206ENST00000598607 CDK19Q9BWU1 502 aa21.25■□□□□ 0.99
GTF2F1-206ENST00000598607 ST20-MTHFSA0A0A6YYL1 179 aa21.24■□□□□ 0.99
GTF2F1-206ENST00000598607 ESCO1Q5FWF5 840 aa21.24■□□□□ 0.99
GTF2F1-206ENST00000598607 ILDR1Q86SU0 546 aaPredicted RBP21.24■□□□□ 0.99
GTF2F1-206ENST00000598607 ATP7BP35670 1465 aa21.23■□□□□ 0.99
GTF2F1-206ENST00000598607 EIF4G2P78344 907 aaKnown RBP eCLIP21.22■□□□□ 0.99
GTF2F1-206ENST00000598607 SRPK2P78362 688 aaKnown RBP21.22■□□□□ 0.99
GTF2F1-206ENST00000598607 ORAI2Q96SN7 254 aa21.22■□□□□ 0.99
GTF2F1-206ENST00000598607 NUDT16Q96DE0 195 aaKnown RBP21.2■□□□□ 0.98
GTF2F1-206ENST00000598607 COL16A1Q07092 1604 aaPredicted RBP21.19■□□□□ 0.98
GTF2F1-206ENST00000598607 ZEB1P37275 1124 aaPredicted RBP21.19■□□□□ 0.98
GTF2F1-206ENST00000598607 TESK2Q96S53 571 aa21.19■□□□□ 0.98
GTF2F1-206ENST00000598607 PHF8Q9UPP1 1060 aa21.19■□□□□ 0.98
GTF2F1-206ENST00000598607 PRR36Q9H6K5 1346 aa21.19■□□□□ 0.98
GTF2F1-206ENST00000598607 HSPA1LP34931 641 aa21.17■□□□□ 0.98
GTF2F1-206ENST00000598607 CABP2Q9NPB3 220 aa21.17■□□□□ 0.98
GTF2F1-206ENST00000598607 CCDC61Q9Y6R9 512 aa21.17■□□□□ 0.98
GTF2F1-206ENST00000598607 NPHP3Q7Z494 1330 aa21.17■□□□□ 0.98
GTF2F1-206ENST00000598607 ATAD2Q6PL18 1390 aa21.16■□□□□ 0.98
GTF2F1-206ENST00000598607 TMF1P82094 1093 aa21.16■□□□□ 0.98
GTF2F1-206ENST00000598607 PUS7Q96PZ0 661 aaKnown RBP21.15■□□□□ 0.98
GTF2F1-206ENST00000598607 HSPA5P11021 654 aaKnown RBP21.14■□□□□ 0.97
GTF2F1-206ENST00000598607 PPIP5K1Q6PFW1 1433 aa21.13■□□□□ 0.97
GTF2F1-206ENST00000598607 AKAP12Q02952 1782 aa21.13■□□□□ 0.97
GTF2F1-206ENST00000598607 SHPRHQ149N8 1683 aa21.12■□□□□ 0.97
GTF2F1-206ENST00000598607 FOXO3O43524 673 aa21.12■□□□□ 0.97
GTF2F1-206ENST00000598607 CDCA8Q53HL2 280 aa21.12■□□□□ 0.97
GTF2F1-206ENST00000598607 PMFBP1Q8TBY8 1022 aa21.12■□□□□ 0.97
GTF2F1-206ENST00000598607 SOS2Q07890 1332 aaPredicted RBP21.11■□□□□ 0.97
GTF2F1-206ENST00000598607 PXDNQ92626 1479 aa21.11■□□□□ 0.97
GTF2F1-206ENST00000598607 PLEKHG3A1L390 1219 aa21.1■□□□□ 0.97
GTF2F1-206ENST00000598607 NGDNQ8NEJ9 315 aaKnown RBP21.1■□□□□ 0.97
GTF2F1-206ENST00000598607 DDX17Q92841 729 aaKnown RBP21.1■□□□□ 0.97
GTF2F1-206ENST00000598607 DISP3Q9P2K9 1392 aa21.1■□□□□ 0.97
GTF2F1-206ENST00000598607 TRPM3Q9HCF6 1732 aaPredicted RBP21.09■□□□□ 0.97
GTF2F1-206ENST00000598607 PSME1Q06323 249 aa21.09■□□□□ 0.97
GTF2F1-206ENST00000598607 LRRC59Q96AG4 307 aaKnown RBP21.09■□□□□ 0.97
GTF2F1-206ENST00000598607 POLR3AO14802 1390 aaPredicted RBP21.09■□□□□ 0.97
GTF2F1-206ENST00000598607 KRT28Q7Z3Y7 464 aa21.07■□□□□ 0.96
GTF2F1-206ENST00000598607 JCADQ9P266 1359 aa21.07■□□□□ 0.96
GTF2F1-206ENST00000598607 NINLQ9Y2I6 1382 aa21.07■□□□□ 0.96
GTF2F1-206ENST00000598607 MON2Q7Z3U7 1717 aa21.07■□□□□ 0.96
GTF2F1-206ENST00000598607 ACEP12821 1306 aa21.06■□□□□ 0.96
GTF2F1-206ENST00000598607 CABP1Q9NZU7 370 aa21.06■□□□□ 0.96
GTF2F1-206ENST00000598607 MYOM1P52179 1685 aa21.05■□□□□ 0.96
GTF2F1-206ENST00000598607 ALS2Q96Q42 1657 aa21.05■□□□□ 0.96
GTF2F1-206ENST00000598607 XPCQ01831 940 aaPredicted RBP21.04■□□□□ 0.96
GTF2F1-206ENST00000598607 SBNO1A3KN83 1393 aa21.04■□□□□ 0.96
GTF2F1-206ENST00000598607 COL22A1Q8NFW1 1626 aaPredicted RBP21.04■□□□□ 0.96
GTF2F1-206ENST00000598607 BRD4O60885 1362 aaPredicted RBP21.03■□□□□ 0.96
GTF2F1-206ENST00000598607 TMC1Q8TDI8 760 aa21.03■□□□□ 0.96
GTF2F1-206ENST00000598607 TNS3Q68CZ2 1445 aa21.03■□□□□ 0.96
GTF2F1-206ENST00000598607 ZNF692Q9BU19 519 aaPredicted RBP21.02■□□□□ 0.96
GTF2F1-206ENST00000598607 SPATA31A3Q5VYP0 1347 aa21.01■□□□□ 0.95
GTF2F1-206ENST00000598607 USP6P35125 1406 aa21■□□□□ 0.95
GTF2F1-206ENST00000598607 CPSF1Q10570 1443 aaKnown RBP21■□□□□ 0.95
GTF2F1-206ENST00000598607 NRKQ7Z2Y5 1582 aa21■□□□□ 0.95
GTF2F1-206ENST00000598607 PNPLA6Q8IY17 1366 aa20.99■□□□□ 0.95
GTF2F1-206ENST00000598607 HDGFL2Q7Z4V5 671 aaPredicted RBP20.99■□□□□ 0.95
GTF2F1-206ENST00000598607 TERF2IPQ9NYB0 399 aa20.99■□□□□ 0.95
GTF2F1-206ENST00000598607 ARHGEF10O15013 1369 aa20.98■□□□□ 0.95
GTF2F1-206ENST00000598607 SLC12A5Q9H2X9 1139 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms