RNA–Protein interactions for RNA: ENST00000596482.5

HOMER3-209, Transcript of homer scaffold protein 3, humanhuman

TSL 5

Gene HOMER3, Length 866 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-209ENST00000596482 NHSL1Q5SYE7 1610 aa27.78■■■□□ 2.04
HOMER3-209ENST00000596482 JCADQ9P266 1359 aa27.77■■■□□ 2.04
HOMER3-209ENST00000596482 SIRT1Q96EB6 747 aa27.77■■■□□ 2.04
HOMER3-209ENST00000596482 KIAA1210Q9ULL0 1709 aa27.73■■■□□ 2.03
HOMER3-209ENST00000596482 PRAM1Q96QH2 718 aa27.73■■■□□ 2.03
HOMER3-209ENST00000596482 PHF23Q9BUL5 403 aaPredicted RBP27.73■■■□□ 2.03
HOMER3-209ENST00000596482 POGKQ9P215 609 aa27.72■■■□□ 2.03
HOMER3-209ENST00000596482 SIN3AQ96ST3 1273 aa27.71■■■□□ 2.03
HOMER3-209ENST00000596482 FMN2Q9NZ56 1722 aa27.71■■■□□ 2.03
HOMER3-209ENST00000596482 TRAK1Q9UPV9 953 aa27.7■■■□□ 2.02
HOMER3-209ENST00000596482 SHPRHQ149N8 1683 aa27.69■■■□□ 2.02
HOMER3-209ENST00000596482 NEUROD1Q13562 356 aa27.69■■■□□ 2.02
HOMER3-209ENST00000596482 SAFB2Q14151 953 aaKnown RBP eCLIP27.69■■■□□ 2.02
HOMER3-209ENST00000596482 ADGRB2O60241 1585 aa27.67■■■□□ 2.02
HOMER3-209ENST00000596482 ORAI2Q96SN7 254 aa27.66■■■□□ 2.02
HOMER3-209ENST00000596482 ARHGEF28Q8N1W1 1705 aaKnown RBP27.66■■■□□ 2.02
HOMER3-209ENST00000596482 L3MBTL2Q969R5 705 aa27.65■■■□□ 2.02
HOMER3-209ENST00000596482 ESCO1Q5FWF5 840 aa27.64■■■□□ 2.02
HOMER3-209ENST00000596482 SPATA31A6Q5VVP1 1343 aa27.64■■■□□ 2.01
HOMER3-209ENST00000596482 NUTM2FA1L443 756 aa27.63■■■□□ 2.01
HOMER3-209ENST00000596482 DDX17Q92841 729 aaKnown RBP27.63■■■□□ 2.01
HOMER3-209ENST00000596482 KIF1AQ12756 1690 aa27.62■■■□□ 2.01
HOMER3-209ENST00000596482 LRRC59Q96AG4 307 aaKnown RBP27.61■■■□□ 2.01
HOMER3-209ENST00000596482 NPHP3Q7Z494 1330 aa27.6■■■□□ 2.01
HOMER3-209ENST00000596482 EIF3AQ14152 1382 aaKnown RBP27.59■■■□□ 2.01
HOMER3-209ENST00000596482 SOS2Q07890 1332 aaPredicted RBP27.57■■■□□ 2
HOMER3-209ENST00000596482 MINK1Q8N4C8 1332 aaPredicted RBP27.57■■■□□ 2
HOMER3-209ENST00000596482 ANKARQ7Z5J8 1434 aa27.57■■■□□ 2
HOMER3-209ENST00000596482 LRP6O75581 1613 aa27.56■■■□□ 2
HOMER3-209ENST00000596482 ILDR2Q71H61 639 aa27.56■■■□□ 2
HOMER3-209ENST00000596482 HIRIP3Q9BW71 556 aaPredicted RBP27.56■■■□□ 2
HOMER3-209ENST00000596482 TONSLQ96HA7 1378 aa27.56■■■□□ 2
HOMER3-209ENST00000596482 TRPM1Q7Z4N2 1603 aa27.56■■■□□ 2
HOMER3-209ENST00000596482 NBPF1Q3BBV0 1214 aa27.55■■■□□ 2
HOMER3-209ENST00000596482 PNPLA6Q8IY17 1366 aa27.55■■■□□ 2
HOMER3-209ENST00000596482 MEX3CQ5U5Q3 659 aaKnown RBP27.54■■■□□ 2
HOMER3-209ENST00000596482 PXDNQ92626 1479 aa27.54■■■□□ 2
HOMER3-209ENST00000596482 TULP4Q9NRJ4 1543 aa27.53■■■□□ 2
HOMER3-209ENST00000596482 USP32Q8NFA0 1604 aa27.52■■■□□ 2
HOMER3-209ENST00000596482 FOXO3O43524 673 aa27.51■■□□□ 1.99
HOMER3-209ENST00000596482 RGPD8O14715 1765 aaPredicted RBP27.5■■□□□ 1.99
HOMER3-209ENST00000596482 ROCK2O75116 1388 aaKnown RBP27.49■■□□□ 1.99
HOMER3-209ENST00000596482 NUTM2BA6NNL0 878 aaPredicted RBP27.49■■□□□ 1.99
HOMER3-209ENST00000596482 NUTM2EB1AL46 878 aaPredicted RBP27.49■■□□□ 1.99
HOMER3-209ENST00000596482 NUTM2AQ8IVF1 878 aaPredicted RBP27.49■■□□□ 1.99
HOMER3-209ENST00000596482 PHF8Q9UPP1 1060 aa27.49■■□□□ 1.99
HOMER3-209ENST00000596482 WASLO00401 505 aaPredicted RBP27.48■■□□□ 1.99
HOMER3-209ENST00000596482 XPCQ01831 940 aaPredicted RBP27.47■■□□□ 1.99
HOMER3-209ENST00000596482 PCGF6Q9BYE7 350 aa27.46■■□□□ 1.99
HOMER3-209ENST00000596482 COL22A1Q8NFW1 1626 aaPredicted RBP27.45■■□□□ 1.99
HOMER3-209ENST00000596482 CENPJQ9HC77 1338 aaPredicted RBP27.44■■□□□ 1.98
HOMER3-209ENST00000596482 QRICH2Q9H0J4 1663 aa27.44■■□□□ 1.98
HOMER3-209ENST00000596482 ITSN1Q15811 1721 aa27.44■■□□□ 1.98
HOMER3-209ENST00000596482 RGS17Q9UGC6 210 aaPredicted RBP27.43■■□□□ 1.98
HOMER3-209ENST00000596482 ATP7BP35670 1465 aa27.42■■□□□ 1.98
HOMER3-209ENST00000596482 PRR36Q9H6K5 1346 aa27.41■■□□□ 1.98
HOMER3-209ENST00000596482 KRT28Q7Z3Y7 464 aa27.4■■□□□ 1.98
HOMER3-209ENST00000596482 PSME1Q06323 249 aa27.39■■□□□ 1.98
HOMER3-209ENST00000596482 PMFBP1Q8TBY8 1022 aa27.39■■□□□ 1.98
HOMER3-209ENST00000596482 TNS3Q68CZ2 1445 aa27.39■■□□□ 1.97
HOMER3-209ENST00000596482 RALGAPBQ86X10 1494 aa27.38■■□□□ 1.97
HOMER3-209ENST00000596482 NBPF8Q3BBV2 869 aa27.38■■□□□ 1.97
HOMER3-209ENST00000596482 GPRASP1Q5JY77 1395 aa27.37■■□□□ 1.97
HOMER3-209ENST00000596482 CDK19Q9BWU1 502 aa27.37■■□□□ 1.97
HOMER3-209ENST00000596482 SPATA31A3Q5VYP0 1347 aa27.37■■□□□ 1.97
HOMER3-209ENST00000596482 TOPAZ1Q8N9V7 1692 aa27.36■■□□□ 1.97
HOMER3-209ENST00000596482 SBNO1A3KN83 1393 aa27.35■■□□□ 1.97
HOMER3-209ENST00000596482 ZNF772Q68DY9 489 aaPredicted RBP27.35■■□□□ 1.97
HOMER3-209ENST00000596482 NUDT16Q96DE0 195 aaKnown RBP27.34■■□□□ 1.97
HOMER3-209ENST00000596482 C8orf37Q96NL8 207 aa27.34■■□□□ 1.97
HOMER3-209ENST00000596482 ADAMTS2O95450 1211 aa27.33■■□□□ 1.97
HOMER3-209ENST00000596482 POTEAQ6S8J7 498 aa27.33■■□□□ 1.97
HOMER3-209ENST00000596482 SOCS7O14512 581 aa27.32■■□□□ 1.96
HOMER3-209ENST00000596482 NGDNQ8NEJ9 315 aaKnown RBP27.32■■□□□ 1.96
HOMER3-209ENST00000596482 CLSPNQ9HAW4 1339 aa27.32■■□□□ 1.96
HOMER3-209ENST00000596482 ARHGEF10O15013 1369 aa27.32■■□□□ 1.96
HOMER3-209ENST00000596482 SRPK2P78362 688 aaKnown RBP27.31■■□□□ 1.96
HOMER3-209ENST00000596482 CARD11Q9BXL7 1154 aa27.31■■□□□ 1.96
HOMER3-209ENST00000596482 AFF2P51816 1311 aa27.31■■□□□ 1.96
HOMER3-209ENST00000596482 TRPM3Q9HCF6 1732 aaPredicted RBP27.3■■□□□ 1.96
HOMER3-209ENST00000596482 LMOD2Q6P5Q4 547 aa27.28■■□□□ 1.96
HOMER3-209ENST00000596482 CCDC61Q9Y6R9 512 aa27.27■■□□□ 1.96
HOMER3-209ENST00000596482 EVC2Q86UK5 1308 aa27.26■■□□□ 1.95
HOMER3-209ENST00000596482 NGLY1Q96IV0 654 aa27.26■■□□□ 1.95
HOMER3-209ENST00000596482 MARF1Q9Y4F3 1742 aaKnown RBP27.26■■□□□ 1.95
HOMER3-209ENST00000596482 HAP1P54257 671 aaPredicted RBP27.25■■□□□ 1.95
HOMER3-209ENST00000596482 PPIP5K1Q6PFW1 1433 aa27.24■■□□□ 1.95
HOMER3-209ENST00000596482 ALS2Q96Q42 1657 aa27.24■■□□□ 1.95
HOMER3-209ENST00000596482 CABP2Q9NPB3 220 aa27.24■■□□□ 1.95
HOMER3-209ENST00000596482 POLR3AO14802 1390 aaPredicted RBP27.23■■□□□ 1.95
HOMER3-209ENST00000596482 ABCA3Q99758 1704 aa27.23■■□□□ 1.95
HOMER3-209ENST00000596482 SBNO2Q9Y2G9 1366 aa27.22■■□□□ 1.95
HOMER3-209ENST00000596482 PAK3O75914 559 aaPredicted RBP27.21■■□□□ 1.95
HOMER3-209ENST00000596482 ACEP12821 1306 aa27.2■■□□□ 1.95
HOMER3-209ENST00000596482 PLEKHG3A1L390 1219 aa27.2■■□□□ 1.94
HOMER3-209ENST00000596482 PLEKHG5O94827 1062 aa27.19■■□□□ 1.94
HOMER3-209ENST00000596482 CCER1Q8TC90 406 aaPredicted RBP27.18■■□□□ 1.94
HOMER3-209ENST00000596482 USP21Q9UK80 565 aa27.17■■□□□ 1.94
HOMER3-209ENST00000596482 TIMELESSQ9UNS1 1208 aa27.17■■□□□ 1.94
HOMER3-209ENST00000596482 CABLES1Q8TDN4 633 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms