RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 ARXQ96QS3 562 aa22.14■■□□□ 1.13
ARHGEF1-213ENST00000595897 MTHFSP49914 203 aa22.13■■□□□ 1.13
ARHGEF1-213ENST00000595897 ANTXR1Q9H6X2 564 aa22.13■■□□□ 1.13
ARHGEF1-213ENST00000595897 L1TD1Q5T7N2 865 aaKnown RBP22.12■■□□□ 1.13
ARHGEF1-213ENST00000595897 FTSJ3Q8IY81 847 aaKnown RBP22.12■■□□□ 1.13
ARHGEF1-213ENST00000595897 NLRP1Q9C000 1473 aa22.12■■□□□ 1.13
ARHGEF1-213ENST00000595897 ZFYVE16Q7Z3T8 1539 aa22.12■■□□□ 1.13
ARHGEF1-213ENST00000595897 MYH16Q9H6N6 1097 aa22.11■■□□□ 1.13
ARHGEF1-213ENST00000595897 VIRMAQ69YN4 1812 aaKnown RBP22.11■■□□□ 1.13
ARHGEF1-213ENST00000595897 UGGT1Q9NYU2 1555 aa22.11■■□□□ 1.13
ARHGEF1-213ENST00000595897 TET3O43151 1660 aa22.1■■□□□ 1.13
ARHGEF1-213ENST00000595897 KIAA1210Q9ULL0 1709 aa22.09■■□□□ 1.13
ARHGEF1-213ENST00000595897 MYOM2P54296 1465 aa22.09■■□□□ 1.13
ARHGEF1-213ENST00000595897 MAP3K4Q9Y6R4 1608 aa22.09■■□□□ 1.13
ARHGEF1-213ENST00000595897 U2AF1L5P0DN76 240 aaPredicted RBP22.08■■□□□ 1.13
ARHGEF1-213ENST00000595897 U2AF1Q01081 240 aaKnown RBP eCLIP22.08■■□□□ 1.13
ARHGEF1-213ENST00000595897 PHF23Q9BUL5 403 aaPredicted RBP22.08■■□□□ 1.13
ARHGEF1-213ENST00000595897 SHROOM2Q13796 1616 aa22.08■■□□□ 1.13
ARHGEF1-213ENST00000595897 MVPQ14764 893 aaKnown RBP22.08■■□□□ 1.12
ARHGEF1-213ENST00000595897 ABCA6Q8N139 1617 aa22.08■■□□□ 1.12
ARHGEF1-213ENST00000595897 SBNO2Q9Y2G9 1366 aa22.08■■□□□ 1.12
ARHGEF1-213ENST00000595897 CHD1O14646 1710 aa22.07■■□□□ 1.12
ARHGEF1-213ENST00000595897 ZKSCAN2Q63HK3 967 aa22.07■■□□□ 1.12
ARHGEF1-213ENST00000595897 RSPH6AQ9H0K4 717 aa22.07■■□□□ 1.12
ARHGEF1-213ENST00000595897 ZMYM3Q14202 1370 aa22.06■■□□□ 1.12
ARHGEF1-213ENST00000595897 MFAP1P55081 439 aaKnown RBP22.05■■□□□ 1.12
ARHGEF1-213ENST00000595897 CCDC27Q2M243 656 aa22.05■■□□□ 1.12
ARHGEF1-213ENST00000595897 DZIP1LQ8IYY4 767 aaKnown RBP22.05■■□□□ 1.12
ARHGEF1-213ENST00000595897 ZCCHC11Q5TAX3 1644 aaKnown RBP22.05■■□□□ 1.12
ARHGEF1-213ENST00000595897 GZF1Q9H116 711 aaPredicted RBP22.05■■□□□ 1.12
ARHGEF1-213ENST00000595897 TMEM132EQ6IEE7 984 aa22.04■■□□□ 1.12
ARHGEF1-213ENST00000595897 NOS1P29475 1434 aa22.03■■□□□ 1.12
ARHGEF1-213ENST00000595897 C22orf23Q9BZE7 217 aa22.03■■□□□ 1.12
ARHGEF1-213ENST00000595897 DEPDC5O75140 1603 aa22.03■■□□□ 1.12
ARHGEF1-213ENST00000595897 SMC4Q9NTJ3 1288 aa22.03■■□□□ 1.12
ARHGEF1-213ENST00000595897 ATP7AQ04656 1500 aa22.02■■□□□ 1.12
ARHGEF1-213ENST00000595897 IQSEC2Q5JU85 1478 aa22.02■■□□□ 1.12
ARHGEF1-213ENST00000595897 GOLGA6L3A6NEY3 463 aa22.02■■□□□ 1.12
ARHGEF1-213ENST00000595897 TSR2Q969E8 191 aaKnown RBP22.02■■□□□ 1.12
ARHGEF1-213ENST00000595897 MCM4P33991 863 aa22.01■■□□□ 1.11
ARHGEF1-213ENST00000595897 ITPRIPQ8IWB1 547 aa22■■□□□ 1.11
ARHGEF1-213ENST00000595897 FANCAO15360 1455 aa21.99■■□□□ 1.11
ARHGEF1-213ENST00000595897 ZNF518AQ6AHZ1 1483 aa21.99■■□□□ 1.11
ARHGEF1-213ENST00000595897 CHMP5Q9NZZ3 219 aa21.99■■□□□ 1.11
ARHGEF1-213ENST00000595897 VWDEQ8N2E2 1590 aa21.99■■□□□ 1.11
ARHGEF1-213ENST00000595897 NEURL4Q96JN8 1562 aa21.99■■□□□ 1.11
ARHGEF1-213ENST00000595897 SHPRHQ149N8 1683 aa21.98■■□□□ 1.11
ARHGEF1-213ENST00000595897 U2SURPO15042 1029 aaKnown RBP21.98■■□□□ 1.11
ARHGEF1-213ENST00000595897 C14orf93Q9H972 538 aaKnown RBP21.97■■□□□ 1.11
ARHGEF1-213ENST00000595897 EXOSC9Q06265 439 aaKnown RBP21.97■■□□□ 1.11
ARHGEF1-213ENST00000595897 RRAGDQ9NQL2 400 aaPredicted RBP21.97■■□□□ 1.11
ARHGEF1-213ENST00000595897 TRIM27P14373 513 aa21.96■■□□□ 1.11
ARHGEF1-213ENST00000595897 XRCC6P12956 609 aaKnown RBP eCLIP21.96■■□□□ 1.11
ARHGEF1-213ENST00000595897 DDX19BQ9UMR2 479 aa21.96■■□□□ 1.11
ARHGEF1-213ENST00000595897 UHRF1BP1LA0JNW5 1464 aa21.95■■□□□ 1.1
ARHGEF1-213ENST00000595897 KIF1BO60333 1816 aa21.95■■□□□ 1.1
ARHGEF1-213ENST00000595897 HSCBQ8IWL3 235 aa21.95■■□□□ 1.1
ARHGEF1-213ENST00000595897 CT47B1P0C2W7 299 aaPredicted RBP21.95■■□□□ 1.1
ARHGEF1-213ENST00000595897 ARAP3Q8WWN8 1544 aa21.94■■□□□ 1.1
ARHGEF1-213ENST00000595897 NRXN1Q9ULB1 1477 aa21.94■■□□□ 1.1
ARHGEF1-213ENST00000595897 ADGRL1O94910 1474 aa21.93■■□□□ 1.1
ARHGEF1-213ENST00000595897 TRAK2O60296 914 aa21.93■■□□□ 1.1
ARHGEF1-213ENST00000595897 EVC2Q86UK5 1308 aa21.93■■□□□ 1.1
ARHGEF1-213ENST00000595897 SSH1Q8WYL5 1049 aa21.93■■□□□ 1.1
ARHGEF1-213ENST00000595897 HDAC1Q13547 482 aaPredicted RBP21.93■■□□□ 1.1
ARHGEF1-213ENST00000595897 MYO3AQ8NEV4 1616 aa21.92■■□□□ 1.1
ARHGEF1-213ENST00000595897 ATF7IPQ6VMQ6 1270 aa21.92■■□□□ 1.1
ARHGEF1-213ENST00000595897 NCBP3Q53F19 620 aaKnown RBP21.91■■□□□ 1.1
ARHGEF1-213ENST00000595897 NUTM2DQ5VT03 806 aaPredicted RBP21.91■■□□□ 1.1
ARHGEF1-213ENST00000595897 EFCAB6Q5THR3 1501 aa21.91■■□□□ 1.1
ARHGEF1-213ENST00000595897 INO80Q9ULG1 1556 aaPredicted RBP21.91■■□□□ 1.1
ARHGEF1-213ENST00000595897 SAFB2Q14151 953 aaKnown RBP eCLIP21.91■■□□□ 1.1
ARHGEF1-213ENST00000595897 PANK2Q9BZ23 570 aa21.9■■□□□ 1.1
ARHGEF1-213ENST00000595897 NOB1Q9ULX3 412 aaKnown RBP21.9■■□□□ 1.1
ARHGEF1-213ENST00000595897 GGT6Q6P531 493 aa21.9■■□□□ 1.1
ARHGEF1-213ENST00000595897 CABP2Q9NPB3 220 aa21.9■■□□□ 1.1
ARHGEF1-213ENST00000595897 FSD2A1L4K1 749 aa21.89■■□□□ 1.1
ARHGEF1-213ENST00000595897 TMPOP42166 694 aaKnown RBP21.89■■□□□ 1.1
ARHGEF1-213ENST00000595897 MROH2AA6NES4 1674 aa21.88■■□□□ 1.09
ARHGEF1-213ENST00000595897 SETBP1Q9Y6X0 1596 aa21.88■■□□□ 1.09
ARHGEF1-213ENST00000595897 ANKRD36BQ8N2N9 1353 aa21.88■■□□□ 1.09
ARHGEF1-213ENST00000595897 MROH1Q8NDA8 1641 aa21.88■■□□□ 1.09
ARHGEF1-213ENST00000595897 TMEM57Q8N5G2 664 aa21.87■■□□□ 1.09
ARHGEF1-213ENST00000595897 NSD2O96028 1365 aa21.87■■□□□ 1.09
ARHGEF1-213ENST00000595897 SMC5Q8IY18 1101 aa21.87■■□□□ 1.09
ARHGEF1-213ENST00000595897 DDX11L8A8MPP1 907 aa21.86■■□□□ 1.09
ARHGEF1-213ENST00000595897 GGNBP2Q9H3C7 697 aa21.86■■□□□ 1.09
ARHGEF1-213ENST00000595897 QRICH2Q9H0J4 1663 aa21.85■■□□□ 1.09
ARHGEF1-213ENST00000595897 IFT172Q9UG01 1749 aa21.85■■□□□ 1.09
ARHGEF1-213ENST00000595897 IPO8O15397 1037 aaKnown RBP21.85■■□□□ 1.09
ARHGEF1-213ENST00000595897 LNPKQ9C0E8 428 aa21.85■■□□□ 1.09
ARHGEF1-213ENST00000595897 SENP3Q9H4L4 574 aaPredicted RBP21.85■■□□□ 1.09
ARHGEF1-213ENST00000595897 TRIM35Q9UPQ4 493 aa21.85■■□□□ 1.09
ARHGEF1-213ENST00000595897 UBE2Q2Q8WVN8 375 aa21.84■■□□□ 1.09
ARHGEF1-213ENST00000595897 ADGRB3O60242 1522 aa21.84■■□□□ 1.09
ARHGEF1-213ENST00000595897 MRE11P49959 708 aa21.84■■□□□ 1.09
ARHGEF1-213ENST00000595897 RIPK4P57078 832 aa21.84■■□□□ 1.09
ARHGEF1-213ENST00000595897 PPRC1Q5VV67 1664 aaKnown RBP21.84■■□□□ 1.09
ARHGEF1-213ENST00000595897 SRPK2P78362 688 aaKnown RBP21.84■■□□□ 1.09
ARHGEF1-213ENST00000595897 PLEKHF1Q96S99 279 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms