RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 EIF3AQ14152 1382 aaKnown RBP21.14■□□□□ 0.98
DDX49-204ENST00000595858 ZEB1P37275 1124 aaPredicted RBP21.14■□□□□ 0.97
DDX49-204ENST00000595858 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.13■□□□□ 0.97
DDX49-204ENST00000595858 MINK1Q8N4C8 1332 aaPredicted RBP21.13■□□□□ 0.97
DDX49-204ENST00000595858 ATF3P18847 181 aa21.11■□□□□ 0.97
DDX49-204ENST00000595858 HIRIP3Q9BW71 556 aaPredicted RBP21.11■□□□□ 0.97
DDX49-204ENST00000595858 USP47Q96K76 1375 aa21.11■□□□□ 0.97
DDX49-204ENST00000595858 CADPS2Q86UW7 1296 aa21.11■□□□□ 0.97
DDX49-204ENST00000595858 NALCNQ8IZF0 1738 aa21.1■□□□□ 0.97
DDX49-204ENST00000595858 DCCP43146 1447 aa21.09■□□□□ 0.97
DDX49-204ENST00000595858 ST20-MTHFSA0A0A6YYL1 179 aa21.09■□□□□ 0.97
DDX49-204ENST00000595858 TOM1O60784 492 aa21.09■□□□□ 0.97
DDX49-204ENST00000595858 UBAP1LF5GYI3 381 aa21.08■□□□□ 0.97
DDX49-204ENST00000595858 EIF4G2P78344 907 aaKnown RBP eCLIP21.07■□□□□ 0.96
DDX49-204ENST00000595858 WASLO00401 505 aaPredicted RBP21.05■□□□□ 0.96
DDX49-204ENST00000595858 SLAIN2Q9P270 581 aa21.05■□□□□ 0.96
DDX49-204ENST00000595858 QRICH2Q9H0J4 1663 aa21.05■□□□□ 0.96
DDX49-204ENST00000595858 CDC42BPGQ6DT37 1551 aa21.04■□□□□ 0.96
DDX49-204ENST00000595858 ADGRB2O60241 1585 aa21.04■□□□□ 0.96
DDX49-204ENST00000595858 TESK2Q96S53 571 aa21.04■□□□□ 0.96
DDX49-204ENST00000595858 SBNO2Q9Y2G9 1366 aa21.04■□□□□ 0.96
DDX49-204ENST00000595858 HSPA5P11021 654 aaKnown RBP21.03■□□□□ 0.96
DDX49-204ENST00000595858 CDK19Q9BWU1 502 aa21.03■□□□□ 0.96
DDX49-204ENST00000595858 NUTM2FA1L443 756 aa21.02■□□□□ 0.96
DDX49-204ENST00000595858 MST1RQ04912 1400 aa21.01■□□□□ 0.95
DDX49-204ENST00000595858 EVC2Q86UK5 1308 aa21■□□□□ 0.95
DDX49-204ENST00000595858 SLC24A1O60721 1099 aa21■□□□□ 0.95
DDX49-204ENST00000595858 PIP4K2BP78356 416 aa20.99■□□□□ 0.95
DDX49-204ENST00000595858 C1orf167Q5SNV9 1468 aa20.98■□□□□ 0.95
DDX49-204ENST00000595858 SRPK2P78362 688 aaKnown RBP20.98■□□□□ 0.95
DDX49-204ENST00000595858 FMN2Q9NZ56 1722 aa20.97■□□□□ 0.95
DDX49-204ENST00000595858 TULP4Q9NRJ4 1543 aa20.97■□□□□ 0.95
DDX49-204ENST00000595858 CABP2Q9NPB3 220 aa20.97■□□□□ 0.95
DDX49-204ENST00000595858 SCAF1Q9H7N4 1312 aaKnown RBP20.97■□□□□ 0.95
DDX49-204ENST00000595858 PRR36Q9H6K5 1346 aa20.96■□□□□ 0.95
DDX49-204ENST00000595858 NUDT16Q96DE0 195 aaKnown RBP20.96■□□□□ 0.95
DDX49-204ENST00000595858 ORAI2Q96SN7 254 aa20.96■□□□□ 0.95
DDX49-204ENST00000595858 FBXO41Q8TF61 875 aa20.95■□□□□ 0.94
DDX49-204ENST00000595858 ANKARQ7Z5J8 1434 aa20.95■□□□□ 0.94
DDX49-204ENST00000595858 TMF1P82094 1093 aa20.94■□□□□ 0.94
DDX49-204ENST00000595858 ESCO1Q5FWF5 840 aa20.94■□□□□ 0.94
DDX49-204ENST00000595858 BRINP3Q76B58 766 aa20.94■□□□□ 0.94
DDX49-204ENST00000595858 CCDC61Q9Y6R9 512 aa20.92■□□□□ 0.94
DDX49-204ENST00000595858 DISP3Q9P2K9 1392 aa20.92■□□□□ 0.94
DDX49-204ENST00000595858 USP32Q8NFA0 1604 aa20.91■□□□□ 0.94
DDX49-204ENST00000595858 PUS7Q96PZ0 661 aaKnown RBP20.91■□□□□ 0.94
DDX49-204ENST00000595858 ATP7BP35670 1465 aa20.91■□□□□ 0.94
DDX49-204ENST00000595858 PHF8Q9UPP1 1060 aa20.9■□□□□ 0.94
DDX49-204ENST00000595858 RGPD8O14715 1765 aaPredicted RBP20.9■□□□□ 0.94
DDX49-204ENST00000595858 ROBO1Q9Y6N7 1651 aa20.89■□□□□ 0.93
DDX49-204ENST00000595858 ATAD2Q6PL18 1390 aa20.88■□□□□ 0.93
DDX49-204ENST00000595858 CDCA8Q53HL2 280 aa20.88■□□□□ 0.93
DDX49-204ENST00000595858 PMFBP1Q8TBY8 1022 aa20.88■□□□□ 0.93
DDX49-204ENST00000595858 PLEKHG3A1L390 1219 aa20.86■□□□□ 0.93
DDX49-204ENST00000595858 FOXO3O43524 673 aa20.86■□□□□ 0.93
DDX49-204ENST00000595858 C11orf95C9JLR9 678 aaPredicted RBP20.86■□□□□ 0.93
DDX49-204ENST00000595858 CABP1Q9NZU7 370 aa20.86■□□□□ 0.93
DDX49-204ENST00000595858 DDX17Q92841 729 aaKnown RBP20.85■□□□□ 0.93
DDX49-204ENST00000595858 PPIP5K1Q6PFW1 1433 aa20.84■□□□□ 0.93
DDX49-204ENST00000595858 NGDNQ8NEJ9 315 aaKnown RBP20.83■□□□□ 0.92
DDX49-204ENST00000595858 NPHP3Q7Z494 1330 aa20.82■□□□□ 0.92
DDX49-204ENST00000595858 TOPAZ1Q8N9V7 1692 aa20.82■□□□□ 0.92
DDX49-204ENST00000595858 ITSN1Q15811 1721 aa20.82■□□□□ 0.92
DDX49-204ENST00000595858 TMC1Q8TDI8 760 aa20.81■□□□□ 0.92
DDX49-204ENST00000595858 SLC12A5Q9H2X9 1139 aa20.81■□□□□ 0.92
DDX49-204ENST00000595858 ACEP12821 1306 aa20.81■□□□□ 0.92
DDX49-204ENST00000595858 KIF1AQ12756 1690 aa20.81■□□□□ 0.92
DDX49-204ENST00000595858 HSPA1LP34931 641 aa20.8■□□□□ 0.92
DDX49-204ENST00000595858 POLR3GLQ9BT43 218 aa20.8■□□□□ 0.92
DDX49-204ENST00000595858 POLR3AO14802 1390 aaPredicted RBP20.8■□□□□ 0.92
DDX49-204ENST00000595858 PSME1Q06323 249 aa20.79■□□□□ 0.92
DDX49-204ENST00000595858 XPCQ01831 940 aaPredicted RBP20.79■□□□□ 0.92
DDX49-204ENST00000595858 AHDC1Q5TGY3 1603 aaPredicted RBP20.79■□□□□ 0.92
DDX49-204ENST00000595858 SOS2Q07890 1332 aaPredicted RBP20.78■□□□□ 0.92
DDX49-204ENST00000595858 KRT28Q7Z3Y7 464 aa20.78■□□□□ 0.92
DDX49-204ENST00000595858 KIF7Q2M1P5 1343 aa20.78■□□□□ 0.92
DDX49-204ENST00000595858 NHSL1Q5SYE7 1610 aa20.77■□□□□ 0.92
DDX49-204ENST00000595858 NINLQ9Y2I6 1382 aa20.77■□□□□ 0.92
DDX49-204ENST00000595858 ILDR1Q86SU0 546 aaPredicted RBP20.75■□□□□ 0.91
DDX49-204ENST00000595858 ZNF692Q9BU19 519 aaPredicted RBP20.75■□□□□ 0.91
DDX49-204ENST00000595858 PXDNQ92626 1479 aa20.74■□□□□ 0.91
DDX49-204ENST00000595858 PHLPP1O60346 1717 aa20.74■□□□□ 0.91
DDX49-204ENST00000595858 CPSF1Q10570 1443 aaKnown RBP20.74■□□□□ 0.91
DDX49-204ENST00000595858 TERF2IPQ9NYB0 399 aa20.74■□□□□ 0.91
DDX49-204ENST00000595858 WASHC2AQ641Q2 1341 aa20.74■□□□□ 0.91
DDX49-204ENST00000595858 HDGFL2Q7Z4V5 671 aaPredicted RBP20.73■□□□□ 0.91
DDX49-204ENST00000595858 LRRC59Q96AG4 307 aaKnown RBP20.73■□□□□ 0.91
DDX49-204ENST00000595858 CCDC7Q96M83 1385 aa20.73■□□□□ 0.91
DDX49-204ENST00000595858 CD163L1Q9NR16 1453 aa20.73■□□□□ 0.91
DDX49-204ENST00000595858 COL16A1Q07092 1604 aaPredicted RBP20.71■□□□□ 0.91
DDX49-204ENST00000595858 USP6P35125 1406 aa20.7■□□□□ 0.91
DDX49-204ENST00000595858 A0A1W2PP64 1363 aa20.7■□□□□ 0.9
DDX49-204ENST00000595858 SBNO1A3KN83 1393 aa20.7■□□□□ 0.9
DDX49-204ENST00000595858 KTN1Q86UP2 1357 aaKnown RBP20.7■□□□□ 0.9
DDX49-204ENST00000595858 SPATA31A3Q5VYP0 1347 aa20.7■□□□□ 0.9
DDX49-204ENST00000595858 ANKRD36BQ8N2N9 1353 aa20.69■□□□□ 0.9
DDX49-204ENST00000595858 PAK3O75914 559 aaPredicted RBP20.69■□□□□ 0.9
DDX49-204ENST00000595858 MYOM1P52179 1685 aa20.68■□□□□ 0.9
DDX49-204ENST00000595858 BRD4O60885 1362 aaPredicted RBP20.68■□□□□ 0.9
DDX49-204ENST00000595858 SSH2Q76I76 1423 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms