RNA–Protein interactions for RNA: ENST00000592839.6

SF3A2-207, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-207ENST00000592839 LRP6O75581 1613 aa21.89■■□□□ 1.09
SF3A2-207ENST00000592839 FMN2Q9NZ56 1722 aa21.89■■□□□ 1.09
SF3A2-207ENST00000592839 ADGRB2O60241 1585 aa21.87■■□□□ 1.09
SF3A2-207ENST00000592839 DHX57Q6P158 1386 aaKnown RBP21.87■■□□□ 1.09
SF3A2-207ENST00000592839 SOS2Q07890 1332 aaPredicted RBP21.85■■□□□ 1.09
SF3A2-207ENST00000592839 KIAA1210Q9ULL0 1709 aa21.84■■□□□ 1.09
SF3A2-207ENST00000592839 POTEAQ6S8J7 498 aa21.84■■□□□ 1.09
SF3A2-207ENST00000592839 COL22A1Q8NFW1 1626 aaPredicted RBP21.84■■□□□ 1.09
SF3A2-207ENST00000592839 PLEKHH1Q9ULM0 1364 aa21.83■■□□□ 1.08
SF3A2-207ENST00000592839 LRRC59Q96AG4 307 aaKnown RBP21.82■■□□□ 1.08
SF3A2-207ENST00000592839 PNPLA6Q8IY17 1366 aa21.82■■□□□ 1.08
SF3A2-207ENST00000592839 KIF1AQ12756 1690 aa21.82■■□□□ 1.08
SF3A2-207ENST00000592839 CFAP70Q5T0N1 1121 aa21.81■■□□□ 1.08
SF3A2-207ENST00000592839 TMEM132EQ6IEE7 984 aa21.81■■□□□ 1.08
SF3A2-207ENST00000592839 PXDNQ92626 1479 aa21.79■■□□□ 1.08
SF3A2-207ENST00000592839 WAPLQ7Z5K2 1190 aa21.78■■□□□ 1.08
SF3A2-207ENST00000592839 ORAI2Q96SN7 254 aa21.77■■□□□ 1.08
SF3A2-207ENST00000592839 ANKARQ7Z5J8 1434 aa21.75■■□□□ 1.07
SF3A2-207ENST00000592839 STK26Q9P289 416 aa21.75■■□□□ 1.07
SF3A2-207ENST00000592839 NPHP3Q7Z494 1330 aa21.75■■□□□ 1.07
SF3A2-207ENST00000592839 ARHGEF28Q8N1W1 1705 aaKnown RBP21.75■■□□□ 1.07
SF3A2-207ENST00000592839 DCAF11Q8TEB1 546 aa21.73■■□□□ 1.07
SF3A2-207ENST00000592839 USP32Q8NFA0 1604 aa21.73■■□□□ 1.07
SF3A2-207ENST00000592839 MEX3CQ5U5Q3 659 aaKnown RBP21.72■■□□□ 1.07
SF3A2-207ENST00000592839 DDX17Q92841 729 aaKnown RBP21.7■■□□□ 1.06
SF3A2-207ENST00000592839 RGPD8O14715 1765 aaPredicted RBP21.69■■□□□ 1.06
SF3A2-207ENST00000592839 PRAM1Q96QH2 718 aa21.69■■□□□ 1.06
SF3A2-207ENST00000592839 ZNF772Q68DY9 489 aaPredicted RBP21.68■■□□□ 1.06
SF3A2-207ENST00000592839 CDK12Q9NYV4 1490 aaPredicted RBP21.68■■□□□ 1.06
SF3A2-207ENST00000592839 TULP4Q9NRJ4 1543 aa21.67■■□□□ 1.06
SF3A2-207ENST00000592839 EIF3AQ14152 1382 aaKnown RBP21.67■■□□□ 1.06
SF3A2-207ENST00000592839 ESCO1Q5FWF5 840 aa21.67■■□□□ 1.06
SF3A2-207ENST00000592839 MARF1Q9Y4F3 1742 aaKnown RBP21.66■■□□□ 1.06
SF3A2-207ENST00000592839 NUTM2BA6NNL0 878 aaPredicted RBP21.62■■□□□ 1.05
SF3A2-207ENST00000592839 NUTM2EB1AL46 878 aaPredicted RBP21.62■■□□□ 1.05
SF3A2-207ENST00000592839 NUTM2AQ8IVF1 878 aaPredicted RBP21.62■■□□□ 1.05
SF3A2-207ENST00000592839 KDM2AQ9Y2K7 1162 aa21.62■■□□□ 1.05
SF3A2-207ENST00000592839 SBNO1A3KN83 1393 aa21.61■■□□□ 1.05
SF3A2-207ENST00000592839 FOXO3O43524 673 aa21.61■■□□□ 1.05
SF3A2-207ENST00000592839 ITSN1Q15811 1721 aa21.6■■□□□ 1.05
SF3A2-207ENST00000592839 TRPM3Q9HCF6 1732 aaPredicted RBP21.6■■□□□ 1.05
SF3A2-207ENST00000592839 SPATA31A3Q5VYP0 1347 aa21.6■■□□□ 1.05
SF3A2-207ENST00000592839 TRAK1Q9UPV9 953 aa21.6■■□□□ 1.05
SF3A2-207ENST00000592839 ATP7BP35670 1465 aa21.59■■□□□ 1.05
SF3A2-207ENST00000592839 TNS3Q68CZ2 1445 aa21.59■■□□□ 1.05
SF3A2-207ENST00000592839 POGKQ9P215 609 aa21.59■■□□□ 1.05
SF3A2-207ENST00000592839 PHF8Q9UPP1 1060 aa21.59■■□□□ 1.05
SF3A2-207ENST00000592839 TOPAZ1Q8N9V7 1692 aa21.59■■□□□ 1.05
SF3A2-207ENST00000592839 AFF2P51816 1311 aa21.58■■□□□ 1.05
SF3A2-207ENST00000592839 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.58■■□□□ 1.05
SF3A2-207ENST00000592839 TRPM1Q7Z4N2 1603 aa21.58■■□□□ 1.04
SF3A2-207ENST00000592839 ABCA3Q99758 1704 aa21.58■■□□□ 1.04
SF3A2-207ENST00000592839 WASLO00401 505 aaPredicted RBP21.57■■□□□ 1.04
SF3A2-207ENST00000592839 RXRBP28702 533 aa21.57■■□□□ 1.04
SF3A2-207ENST00000592839 FNBP4Q8N3X1 1017 aaPredicted RBP21.57■■□□□ 1.04
SF3A2-207ENST00000592839 ALS2Q96Q42 1657 aa21.56■■□□□ 1.04
SF3A2-207ENST00000592839 PRR36Q9H6K5 1346 aa21.55■■□□□ 1.04
SF3A2-207ENST00000592839 NUTM2FA1L443 756 aa21.54■■□□□ 1.04
SF3A2-207ENST00000592839 ARHGEF10O15013 1369 aa21.53■■□□□ 1.04
SF3A2-207ENST00000592839 SAFB2Q14151 953 aaKnown RBP eCLIP21.53■■□□□ 1.04
SF3A2-207ENST00000592839 KRT28Q7Z3Y7 464 aa21.52■■□□□ 1.04
SF3A2-207ENST00000592839 L3MBTL2Q969R5 705 aa21.52■■□□□ 1.04
SF3A2-207ENST00000592839 CRYBG1Q9Y4K1 1723 aa21.52■■□□□ 1.03
SF3A2-207ENST00000592839 SLIT2O94813 1529 aa21.51■■□□□ 1.03
SF3A2-207ENST00000592839 PSME1Q06323 249 aa21.51■■□□□ 1.03
SF3A2-207ENST00000592839 C8orf37Q96NL8 207 aa21.51■■□□□ 1.03
SF3A2-207ENST00000592839 ATRNO75882 1429 aa21.51■■□□□ 1.03
SF3A2-207ENST00000592839 MINK1Q8N4C8 1332 aaPredicted RBP21.51■■□□□ 1.03
SF3A2-207ENST00000592839 BCL9LQ86UU0 1499 aa21.51■■□□□ 1.03
SF3A2-207ENST00000592839 GPRASP1Q5JY77 1395 aa21.5■■□□□ 1.03
SF3A2-207ENST00000592839 POLR3AO14802 1390 aaPredicted RBP21.49■■□□□ 1.03
SF3A2-207ENST00000592839 XPCQ01831 940 aaPredicted RBP21.49■■□□□ 1.03
SF3A2-207ENST00000592839 NBPF1Q3BBV0 1214 aa21.49■■□□□ 1.03
SF3A2-207ENST00000592839 UPF1Q92900 1129 aaKnown RBP eCLIP21.49■■□□□ 1.03
SF3A2-207ENST00000592839 NWD2Q9ULI1 1742 aa21.49■■□□□ 1.03
SF3A2-207ENST00000592839 RBM6P78332 1123 aaKnown RBP21.48■■□□□ 1.03
SF3A2-207ENST00000592839 QRICH2Q9H0J4 1663 aa21.47■■□□□ 1.03
SF3A2-207ENST00000592839 HIRIP3Q9BW71 556 aaPredicted RBP21.47■■□□□ 1.03
SF3A2-207ENST00000592839 RGS12O14924 1447 aa21.46■■□□□ 1.03
SF3A2-207ENST00000592839 ADAMTS2O95450 1211 aa21.46■■□□□ 1.03
SF3A2-207ENST00000592839 TRIM26Q12899 539 aaPredicted RBP21.46■■□□□ 1.03
SF3A2-207ENST00000592839 NGLY1Q96IV0 654 aa21.46■■□□□ 1.03
SF3A2-207ENST00000592839 QTRT2Q9H974 415 aaKnown RBP21.46■■□□□ 1.03
SF3A2-207ENST00000592839 SIN3AQ96ST3 1273 aa21.45■■□□□ 1.02
SF3A2-207ENST00000592839 TRPC5Q9UL62 973 aaPredicted RBP21.44■■□□□ 1.02
SF3A2-207ENST00000592839 CENPJQ9HC77 1338 aaPredicted RBP21.44■■□□□ 1.02
SF3A2-207ENST00000592839 USP21Q9UK80 565 aa21.43■■□□□ 1.02
SF3A2-207ENST00000592839 PLCH1Q4KWH8 1693 aa21.43■■□□□ 1.02
SF3A2-207ENST00000592839 PLEKHG3A1L390 1219 aa21.42■■□□□ 1.02
SF3A2-207ENST00000592839 PMFBP1Q8TBY8 1022 aa21.42■■□□□ 1.02
SF3A2-207ENST00000592839 NUDT16Q96DE0 195 aaKnown RBP21.42■■□□□ 1.02
SF3A2-207ENST00000592839 SBNO2Q9Y2G9 1366 aa21.42■■□□□ 1.02
SF3A2-207ENST00000592839 CCDC61Q9Y6R9 512 aa21.42■■□□□ 1.02
SF3A2-207ENST00000592839 BRD4O60885 1362 aaPredicted RBP21.41■■□□□ 1.02
SF3A2-207ENST00000592839 CDK19Q9BWU1 502 aa21.4■■□□□ 1.02
SF3A2-207ENST00000592839 RALGAPBQ86X10 1494 aa21.39■■□□□ 1.02
SF3A2-207ENST00000592839 NRAPQ86VF7 1730 aa21.39■■□□□ 1.01
SF3A2-207ENST00000592839 GLI3P10071 1580 aa21.38■■□□□ 1.01
SF3A2-207ENST00000592839 PHRF1Q9P1Y6 1649 aaKnown RBP21.37■■□□□ 1.01
SF3A2-207ENST00000592839 COL14A1Q05707 1796 aaKnown RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms