RNA–Protein interactions for RNA: ENST00000591650.1

AP3D1-211, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 1 (best)

Gene AP3D1, Length 1,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-211ENST00000591650 SIRT1Q96EB6 747 aa24.47■■□□□ 1.51
AP3D1-211ENST00000591650 CENPJQ9HC77 1338 aaPredicted RBP24.47■■□□□ 1.51
AP3D1-211ENST00000591650 CDC42BPGQ6DT37 1551 aa24.46■■□□□ 1.51
AP3D1-211ENST00000591650 POGKQ9P215 609 aa24.45■■□□□ 1.51
AP3D1-211ENST00000591650 NCOA3Q9Y6Q9 1424 aa24.44■■□□□ 1.5
AP3D1-211ENST00000591650 TULP4Q9NRJ4 1543 aa24.43■■□□□ 1.5
AP3D1-211ENST00000591650 FMN2Q9NZ56 1722 aa24.42■■□□□ 1.5
AP3D1-211ENST00000591650 IQSEC2Q5JU85 1478 aa24.42■■□□□ 1.5
AP3D1-211ENST00000591650 MINK1Q8N4C8 1332 aaPredicted RBP24.41■■□□□ 1.5
AP3D1-211ENST00000591650 SBNO2Q9Y2G9 1366 aa24.4■■□□□ 1.5
AP3D1-211ENST00000591650 ST20-MTHFSA0A0A6YYL1 179 aa24.4■■□□□ 1.5
AP3D1-211ENST00000591650 HSPA5P11021 654 aaKnown RBP24.39■■□□□ 1.5
AP3D1-211ENST00000591650 C14orf37Q86TY3 774 aa24.39■■□□□ 1.5
AP3D1-211ENST00000591650 EIF4G2P78344 907 aaKnown RBP eCLIP24.38■■□□□ 1.49
AP3D1-211ENST00000591650 HIRIP3Q9BW71 556 aaPredicted RBP24.38■■□□□ 1.49
AP3D1-211ENST00000591650 DCCP43146 1447 aa24.38■■□□□ 1.49
AP3D1-211ENST00000591650 MSH6P52701 1360 aa24.38■■□□□ 1.49
AP3D1-211ENST00000591650 USP32Q8NFA0 1604 aa24.36■■□□□ 1.49
AP3D1-211ENST00000591650 TESK2Q96S53 571 aa24.35■■□□□ 1.49
AP3D1-211ENST00000591650 C19orf44Q9H6X5 657 aa24.35■■□□□ 1.49
AP3D1-211ENST00000591650 RGPD8O14715 1765 aaPredicted RBP24.35■■□□□ 1.49
AP3D1-211ENST00000591650 TOPAZ1Q8N9V7 1692 aa24.32■■□□□ 1.48
AP3D1-211ENST00000591650 UBAP1LF5GYI3 381 aa24.31■■□□□ 1.48
AP3D1-211ENST00000591650 DISP3Q9P2K9 1392 aa24.31■■□□□ 1.48
AP3D1-211ENST00000591650 MST1RQ04912 1400 aa24.3■■□□□ 1.48
AP3D1-211ENST00000591650 ITSN1Q15811 1721 aa24.3■■□□□ 1.48
AP3D1-211ENST00000591650 ATP7BP35670 1465 aa24.29■■□□□ 1.48
AP3D1-211ENST00000591650 WASLO00401 505 aaPredicted RBP24.27■■□□□ 1.48
AP3D1-211ENST00000591650 TOM1O60784 492 aa24.26■■□□□ 1.47
AP3D1-211ENST00000591650 ATF3P18847 181 aa24.26■■□□□ 1.47
AP3D1-211ENST00000591650 EVC2Q86UK5 1308 aa24.25■■□□□ 1.47
AP3D1-211ENST00000591650 CADPS2Q86UW7 1296 aa24.25■■□□□ 1.47
AP3D1-211ENST00000591650 CDK19Q9BWU1 502 aa24.25■■□□□ 1.47
AP3D1-211ENST00000591650 C1orf167Q5SNV9 1468 aa24.25■■□□□ 1.47
AP3D1-211ENST00000591650 MYOM1P52179 1685 aa24.25■■□□□ 1.47
AP3D1-211ENST00000591650 ANKARQ7Z5J8 1434 aa24.24■■□□□ 1.47
AP3D1-211ENST00000591650 PRR36Q9H6K5 1346 aa24.24■■□□□ 1.47
AP3D1-211ENST00000591650 NUTM2FA1L443 756 aa24.23■■□□□ 1.47
AP3D1-211ENST00000591650 ROBO1Q9Y6N7 1651 aa24.23■■□□□ 1.47
AP3D1-211ENST00000591650 FBXO41Q8TF61 875 aa24.22■■□□□ 1.47
AP3D1-211ENST00000591650 CABP2Q9NPB3 220 aa24.22■■□□□ 1.47
AP3D1-211ENST00000591650 SLAIN2Q9P270 581 aa24.22■■□□□ 1.47
AP3D1-211ENST00000591650 PIP4K2BP78356 416 aa24.21■■□□□ 1.47
AP3D1-211ENST00000591650 SRPK2P78362 688 aaKnown RBP24.21■■□□□ 1.47
AP3D1-211ENST00000591650 KIF1AQ12756 1690 aa24.21■■□□□ 1.47
AP3D1-211ENST00000591650 TMF1P82094 1093 aa24.2■■□□□ 1.46
AP3D1-211ENST00000591650 C11orf95C9JLR9 678 aaPredicted RBP24.17■■□□□ 1.46
AP3D1-211ENST00000591650 ATAD2Q6PL18 1390 aa24.16■■□□□ 1.46
AP3D1-211ENST00000591650 SCAF1Q9H7N4 1312 aaKnown RBP24.16■■□□□ 1.46
AP3D1-211ENST00000591650 NUDT16Q96DE0 195 aaKnown RBP24.16■■□□□ 1.46
AP3D1-211ENST00000591650 NHSL1Q5SYE7 1610 aa24.16■■□□□ 1.46
AP3D1-211ENST00000591650 PPIP5K1Q6PFW1 1433 aa24.15■■□□□ 1.46
AP3D1-211ENST00000591650 SLC24A1O60721 1099 aa24.15■■□□□ 1.46
AP3D1-211ENST00000591650 AKAP12Q02952 1782 aa24.14■■□□□ 1.45
AP3D1-211ENST00000591650 KIF7Q2M1P5 1343 aa24.13■■□□□ 1.45
AP3D1-211ENST00000591650 ORAI2Q96SN7 254 aa24.12■■□□□ 1.45
AP3D1-211ENST00000591650 BRINP3Q76B58 766 aa24.11■■□□□ 1.45
AP3D1-211ENST00000591650 CCDC7Q96M83 1385 aa24.1■■□□□ 1.45
AP3D1-211ENST00000591650 MON2Q7Z3U7 1717 aa24.1■■□□□ 1.45
AP3D1-211ENST00000591650 CDCA8Q53HL2 280 aa24.1■■□□□ 1.45
AP3D1-211ENST00000591650 ESCO1Q5FWF5 840 aa24.1■■□□□ 1.45
AP3D1-211ENST00000591650 PUS7Q96PZ0 661 aaKnown RBP24.1■■□□□ 1.45
AP3D1-211ENST00000591650 WASHC2AQ641Q2 1341 aa24.09■■□□□ 1.45
AP3D1-211ENST00000591650 AHDC1Q5TGY3 1603 aaPredicted RBP24.09■■□□□ 1.45
AP3D1-211ENST00000591650 POLR3GLQ9BT43 218 aa24.09■■□□□ 1.45
AP3D1-211ENST00000591650 CCDC61Q9Y6R9 512 aa24.09■■□□□ 1.45
AP3D1-211ENST00000591650 CD163L1Q9NR16 1453 aa24.08■■□□□ 1.44
AP3D1-211ENST00000591650 NRKQ7Z2Y5 1582 aa24.07■■□□□ 1.44
AP3D1-211ENST00000591650 PHF8Q9UPP1 1060 aa24.07■■□□□ 1.44
AP3D1-211ENST00000591650 PMFBP1Q8TBY8 1022 aa24.06■■□□□ 1.44
AP3D1-211ENST00000591650 PHLPP1O60346 1717 aa24.05■■□□□ 1.44
AP3D1-211ENST00000591650 TRPM3Q9HCF6 1732 aaPredicted RBP24.05■■□□□ 1.44
AP3D1-211ENST00000591650 NINLQ9Y2I6 1382 aa24.05■■□□□ 1.44
AP3D1-211ENST00000591650 CABP1Q9NZU7 370 aa24.05■■□□□ 1.44
AP3D1-211ENST00000591650 POLR3AO14802 1390 aaPredicted RBP24.04■■□□□ 1.44
AP3D1-211ENST00000591650 PXDNQ92626 1479 aa24.04■■□□□ 1.44
AP3D1-211ENST00000591650 PLEKHG3A1L390 1219 aa24.03■■□□□ 1.44
AP3D1-211ENST00000591650 TMC1Q8TDI8 760 aa24.03■■□□□ 1.44
AP3D1-211ENST00000591650 DDX17Q92841 729 aaKnown RBP24.03■■□□□ 1.44
AP3D1-211ENST00000591650 HSPA1LP34931 641 aa24.02■■□□□ 1.44
AP3D1-211ENST00000591650 SLC12A5Q9H2X9 1139 aa24.02■■□□□ 1.44
AP3D1-211ENST00000591650 COL16A1Q07092 1604 aaPredicted RBP24.02■■□□□ 1.44
AP3D1-211ENST00000591650 ACEP12821 1306 aa24.01■■□□□ 1.43
AP3D1-211ENST00000591650 A0A1W2PP64 1363 aa24.01■■□□□ 1.43
AP3D1-211ENST00000591650 CPSF1Q10570 1443 aaKnown RBP24.01■■□□□ 1.43
AP3D1-211ENST00000591650 FOXO3O43524 673 aa23.99■■□□□ 1.43
AP3D1-211ENST00000591650 NGDNQ8NEJ9 315 aaKnown RBP23.99■■□□□ 1.43
AP3D1-211ENST00000591650 ANKRD36BQ8N2N9 1353 aa23.99■■□□□ 1.43
AP3D1-211ENST00000591650 USP6P35125 1406 aa23.98■■□□□ 1.43
AP3D1-211ENST00000591650 ALS2Q96Q42 1657 aa23.97■■□□□ 1.43
AP3D1-211ENST00000591650 XPCQ01831 940 aaPredicted RBP23.97■■□□□ 1.43
AP3D1-211ENST00000591650 NPHP3Q7Z494 1330 aa23.97■■□□□ 1.43
AP3D1-211ENST00000591650 ZNF316A6NFI3 1004 aaPredicted RBP23.96■■□□□ 1.43
AP3D1-211ENST00000591650 PIK3C2AO00443 1686 aa23.95■■□□□ 1.42
AP3D1-211ENST00000591650 KTN1Q86UP2 1357 aaKnown RBP23.94■■□□□ 1.42
AP3D1-211ENST00000591650 KIF20BQ96Q89 1820 aa23.94■■□□□ 1.42
AP3D1-211ENST00000591650 SSH2Q76I76 1423 aa23.93■■□□□ 1.42
AP3D1-211ENST00000591650 SOS2Q07890 1332 aaPredicted RBP23.93■■□□□ 1.42
AP3D1-211ENST00000591650 TERF2IPQ9NYB0 399 aa23.93■■□□□ 1.42
AP3D1-211ENST00000591650 HDGFL2Q7Z4V5 671 aaPredicted RBP23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms