RNA–Protein interactions for RNA: ENST00000591645.1

TPM4-214, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-214ENST00000591645 GRIPAP1Q4V328 841 aa8.99□□□□□ -0.97
TPM4-214ENST00000591645 FAM160A2Q8N612 972 aaPredicted RBP8.99□□□□□ -0.97
TPM4-214ENST00000591645 REPIN1Q9BWE0 567 aaKnown RBP8.99□□□□□ -0.97
TPM4-214ENST00000591645 SALL2Q9Y467 1007 aaPredicted RBP8.99□□□□□ -0.97
TPM4-214ENST00000591645 ST8SIA5O15466 376 aa8.98□□□□□ -0.97
TPM4-214ENST00000591645 KDM4AO75164 1064 aa8.98□□□□□ -0.97
TPM4-214ENST00000591645 FCF1Q9Y324 198 aaKnown RBP8.98□□□□□ -0.97
TPM4-214ENST00000591645 TRIM66O15016 1216 aa8.97□□□□□ -0.97
TPM4-214ENST00000591645 PRDM9Q9NQV7 894 aa8.97□□□□□ -0.97
TPM4-214ENST00000591645 FMNL1O95466 1100 aaPredicted RBP8.96□□□□□ -0.98
TPM4-214ENST00000591645 RPIAP49247 311 aa8.96□□□□□ -0.98
TPM4-214ENST00000591645 TTLL12Q14166 644 aaPredicted RBP8.96□□□□□ -0.98
TPM4-214ENST00000591645 AAASQ9NRG9 546 aa8.96□□□□□ -0.98
TPM4-214ENST00000591645 GIGYF2Q6Y7W6 1299 aaKnown RBP8.95□□□□□ -0.98
TPM4-214ENST00000591645 SSTR3P32745 418 aaPredicted RBP8.94□□□□□ -0.98
TPM4-214ENST00000591645 BRICD5Q6PL45 260 aa8.94□□□□□ -0.98
TPM4-214ENST00000591645 PARP9Q8IXQ6 854 aa8.94□□□□□ -0.98
TPM4-214ENST00000591645 HOXA2O43364 376 aa8.93□□□□□ -0.98
TPM4-214ENST00000591645 Q3C1V9 767 aa8.93□□□□□ -0.98
TPM4-214ENST00000591645 RNF19BQ6ZMZ0 732 aa8.93□□□□□ -0.98
TPM4-214ENST00000591645 CD2BP2O95400 341 aaKnown RBP8.92□□□□□ -0.98
TPM4-214ENST00000591645 MSS51Q4VC12 460 aa8.91□□□□□ -0.98
TPM4-214ENST00000591645 SLC24A3Q9HC58 644 aa8.91□□□□□ -0.98
TPM4-214ENST00000591645 TOR4AQ9NXH8 423 aa8.91□□□□□ -0.98
TPM4-214ENST00000591645 DACH1Q9UI36 760 aa8.91□□□□□ -0.98
TPM4-214ENST00000591645 NUTM1Q86Y26 1132 aa8.9□□□□□ -0.98
TPM4-214ENST00000591645 PDE4DQ08499 809 aa8.89□□□□□ -0.99
TPM4-214ENST00000591645 CYP4X1Q8N118 509 aa8.89□□□□□ -0.99
TPM4-214ENST00000591645 MS4A1P11836 297 aa8.87□□□□□ -0.99
TPM4-214ENST00000591645 SPIRE2Q8WWL2 714 aa8.87□□□□□ -0.99
TPM4-214ENST00000591645 HLA-CQ95604 372 aa8.87□□□□□ -0.99
TPM4-214ENST00000591645 BEGAINQ9BUH8 593 aa8.87□□□□□ -0.99
TPM4-214ENST00000591645 ZBTB24O43167 697 aaPredicted RBP8.86□□□□□ -0.99
TPM4-214ENST00000591645 AVPP01185 164 aa8.86□□□□□ -0.99
TPM4-214ENST00000591645 DIXDC1Q155Q3 683 aa8.86□□□□□ -0.99
TPM4-214ENST00000591645 CRIPAKQ8N1N5 446 aa8.86□□□□□ -0.99
TPM4-214ENST00000591645 USB1Q9BQ65 265 aaKnown RBP8.86□□□□□ -0.99
TPM4-214ENST00000591645 GJA5P36382 358 aa8.85□□□□□ -0.99
TPM4-214ENST00000591645 MMP16P51512 607 aa8.85□□□□□ -0.99
TPM4-214ENST00000591645 GUCA2AQ02747 115 aa8.84□□□□□ -0.99
TPM4-214ENST00000591645 GMPR2Q9P2T1 348 aaKnown RBP8.84□□□□□ -0.99
TPM4-214ENST00000591645 TTC24A2A3L6 582 aaPredicted RBP8.83□□□□□ -1
TPM4-214ENST00000591645 AXIN1O15169 862 aa8.83□□□□□ -1
TPM4-214ENST00000591645 DXOO77932 396 aaKnown RBP8.83□□□□□ -1
TPM4-214ENST00000591645 FDX1P10109 184 aa8.83□□□□□ -1
TPM4-214ENST00000591645 TRIM32Q13049 653 aa8.82□□□□□ -1
TPM4-214ENST00000591645 TREML4Q6UXN2 200 aa8.82□□□□□ -1
TPM4-214ENST00000591645 RETREG3Q86VR2 466 aa8.82□□□□□ -1
TPM4-214ENST00000591645 TBC1D2Q9BYX2 928 aa8.82□□□□□ -1
TPM4-214ENST00000591645 PCDHGC3Q9UN70 934 aa8.82□□□□□ -1
TPM4-214ENST00000591645 MOXD2PA6NHM9 499 aa8.81□□□□□ -1
TPM4-214ENST00000591645 WNT7AO00755 349 aa8.81□□□□□ -1
TPM4-214ENST00000591645 SMPD1P17405 629 aa8.8□□□□□ -1
TPM4-214ENST00000591645 CTC1Q2NKJ3 1217 aa8.8□□□□□ -1
TPM4-214ENST00000591645 LCE2AQ5TA79 106 aaPredicted RBP8.8□□□□□ -1
TPM4-214ENST00000591645 MRGPRX2Q96LB1 330 aa8.8□□□□□ -1
TPM4-214ENST00000591645 C11orf95C9JLR9 678 aaPredicted RBP8.79□□□□□ -1
TPM4-214ENST00000591645 SPTLC1O15269 473 aa8.79□□□□□ -1
TPM4-214ENST00000591645 SMCPP49901 116 aaPredicted RBP8.79□□□□□ -1
TPM4-214ENST00000591645 RSBN1LQ6PCB5 846 aaPredicted RBP8.79□□□□□ -1
TPM4-214ENST00000591645 SNIP1Q8TAD8 396 aaKnown RBP8.79□□□□□ -1
TPM4-214ENST00000591645 SPDYE5A6NIY4 337 aa8.78□□□□□ -1
TPM4-214ENST00000591645 J3QL48 77 aa8.78□□□□□ -1
TPM4-214ENST00000591645 JUNDP17535 347 aa8.78□□□□□ -1
TPM4-214ENST00000591645 NDUFV2P19404 249 aa8.78□□□□□ -1
TPM4-214ENST00000591645 CCDC24Q8N4L8 307 aa8.78□□□□□ -1
TPM4-214ENST00000591645 SYMPKQ92797 1274 aaKnown RBP8.77□□□□□ -1.01
TPM4-214ENST00000591645 C6orf229H3BNL8 230 aa8.76□□□□□ -1.01
TPM4-214ENST00000591645 TUSC1Q2TAM9 212 aa8.76□□□□□ -1.01
TPM4-214ENST00000591645 SKOR1P84550 965 aa8.75□□□□□ -1.01
TPM4-214ENST00000591645 MTMR2Q13614 643 aa8.75□□□□□ -1.01
TPM4-214ENST00000591645 PRPF38BQ5VTL8 546 aaKnown RBP8.74□□□□□ -1.01
TPM4-214ENST00000591645 MYSM1Q5VVJ2 828 aa8.74□□□□□ -1.01
TPM4-214ENST00000591645 DESI1Q6ICB0 168 aa8.74□□□□□ -1.01
TPM4-214ENST00000591645 RIC3Q7Z5B4 369 aa8.74□□□□□ -1.01
TPM4-214ENST00000591645 HPS1Q92902 700 aa8.74□□□□□ -1.01
TPM4-214ENST00000591645 RC3H1Q5TC82 1133 aaKnown RBP8.73□□□□□ -1.01
TPM4-214ENST00000591645 KDM4CQ9H3R0 1056 aa8.73□□□□□ -1.01
TPM4-214ENST00000591645 ATP13A2Q9NQ11 1180 aa8.73□□□□□ -1.01
TPM4-214ENST00000591645 WFS1O76024 890 aa8.72□□□□□ -1.01
TPM4-214ENST00000591645 SNRPBP14678 240 aaKnown RBP8.72□□□□□ -1.01
TPM4-214ENST00000591645 RSPH6AQ9H0K4 717 aa8.72□□□□□ -1.01
TPM4-214ENST00000591645 ZBTB3Q9H5J0 574 aa8.72□□□□□ -1.01
TPM4-214ENST00000591645 PTPRNQ16849 979 aa8.71□□□□□ -1.02
TPM4-214ENST00000591645 PRR7Q8TB68 274 aa8.71□□□□□ -1.02
TPM4-214ENST00000591645 DDRGK1Q96HY6 314 aa8.71□□□□□ -1.02
TPM4-214ENST00000591645 GPBP1L1Q9HC44 474 aaPredicted RBP8.71□□□□□ -1.02
TPM4-214ENST00000591645 PCDHB15Q9Y5E8 787 aa8.71□□□□□ -1.02
TPM4-214ENST00000591645 NFX1Q12986 1120 aaKnown RBP8.7□□□□□ -1.02
TPM4-214ENST00000591645 PTCRAQ6ISU1 281 aaPredicted RBP8.7□□□□□ -1.02
TPM4-214ENST00000591645 NUDT12Q9BQG2 462 aa8.7□□□□□ -1.02
TPM4-214ENST00000591645 LIMD1Q9UGP4 676 aa8.7□□□□□ -1.02
TPM4-214ENST00000591645 CCNYL3P0C7X3 344 aa8.69□□□□□ -1.02
TPM4-214ENST00000591645 HRCP23327 699 aa8.69□□□□□ -1.02
TPM4-214ENST00000591645 WNT7BP56706 349 aa8.69□□□□□ -1.02
TPM4-214ENST00000591645 CLK2P49760 499 aaKnown RBP8.68□□□□□ -1.02
TPM4-214ENST00000591645 CFAP99D6REC4 459 aa8.67□□□□□ -1.02
TPM4-214ENST00000591645 LILRB3O75022 631 aa8.67□□□□□ -1.02
TPM4-214ENST00000591645 ALDH1A1P00352 501 aa8.67□□□□□ -1.02
TPM4-214ENST00000591645 TRIM47Q96LD4 638 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms